EMLSAT00000002349, EMLSAT00000002349-698196 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002349
Unique NameEMLSAT00000002349-698196
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s144supercontigLSalAtl2s144:1083318..1083627 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002349 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002349EMLSAG00000002349-685115Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010407EMLSAE00000010407-719335Lepeophtheirus salmonisexon
EMLSAE00000010408EMLSAE00000010408-719336Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780385auto780385Lepeophtheirus salmonispolypeptide
EMLSAP00000002349EMLSAP00000002349Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002349

>EMLSAP00000002349 ID=EMLSAP00000002349|Name=EMLSAP00000002349|organism=Lepeophtheirus salmonis|type=polypeptide|length=83bp
MQNEAGQYVDILIPRKCSASNRIISAKDHASIQINVADVDEATGRMTGTS
KTXAICGAIRRMGESDDCINRLAKKDAILSKKF
back to top

mRNA from alignment at LSalAtl2s144:1083318..1083627-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002349-698196 ID=EMLSAT00000002349-698196|Name=EMLSAT00000002349|organism=Lepeophtheirus salmonis|type=mRNA|length=310bp|location=Sequence derived from alignment at LSalAtl2s144:1083318..1083627- (Lepeophtheirus salmonis)
ATGCAAAACGAAGCCGGACAATACGTAGATATCCTTATTCCCCGCAAGTG
GTATGTTACACGGACTGGAATATCTGTGAATTTTATTTGATTATTGTGAT
TGTTTCAGTTCCGCCAGCAACAGAATTATTTCTGCCAAGGATCACGCTTC
CATTCAAATCAATGTCGCTGATGTGGATGAAGCTACCGGAAGAATGACAG
GTACCTCTAAGACCTKCGCCATCTGTGGCGCCATTAGACGAATGGGTGAA
TCCGATGATTGCATTAATCGTTTAGCCAAAAAAGATGCCATTTTGTCGAA
AAAGTTCTAA
back to top
Add to Basket