EMLSAT00000002385, EMLSAT00000002385-698232 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002385
Unique Name	EMLSAT00000002385-698232
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1453	supercontig	LSalAtl2s1453:5092..9768 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002385 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002385	EMLSAG00000002385-685151	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000010545	EMLSAE00000010545-719473	Lepeophtheirus salmonis	exon
EMLSAE00000010546	EMLSAE00000010546-719474	Lepeophtheirus salmonis	exon
EMLSAE00000010547	EMLSAE00000010547-719475	Lepeophtheirus salmonis	exon
EMLSAE00000010548	EMLSAE00000010548-719476	Lepeophtheirus salmonis	exon
EMLSAE00000010549	EMLSAE00000010549-719477	Lepeophtheirus salmonis	exon
EMLSAE00000010550	EMLSAE00000010550-719478	Lepeophtheirus salmonis	exon
EMLSAE00000010551	EMLSAE00000010551-719479	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto768550	auto768550	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002385	EMLSAP00000002385	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1453:5092..9768-

protein sequence of EMLSAP00000002385

>EMLSAP00000002385 ID=EMLSAP00000002385|Name=EMLSAP00000002385|organism=Lepeophtheirus salmonis|type=polypeptide|length=560bp
FACGGFVXKTVFPPGESQVNIFSELTTLLNNQMKTLLERNSTNKDIRPFV
LVRNFYQACMNETAIETVGLKPLQEMLSRLGGWLDTKENDDVLTKGTKYN
WTSDLKKLRDHGYSTKFLMHIDISQDLSNYSRMSLFLDKPEFGIYRNALV
KGRGDFEVEAYFQYMKDAAVLLGHNFSEVEENLENILNFEIQMANLTKSN
DEISNLTDLNNKMQIKNLTTLNPCIPWLQYINSLLKINQMKTLLERNSTN
KDIKPFVLVRNFYQACMNETAIETVGLKPLQEMLSRLGGWLDTKETYDGS
TKGTKYNWTSDLKKLRDHGYSTNFLMYIDISQDLSNYSRMSLLLDKPAFG
INRNVLVKGRGDFKVEAYFQYMKDXAVLLGHNFTDVEENLDNILNFEIQM
ANLTKSNDEISGLENWWDNQTEKNFLNRSQCFVEQYGNYTIKSVNQTING
KLTLPENIADNGGLRAAYRAFIEWKNNNTKSIRLLPGLNFTSNQLFWLSG
ANMWCTKYLKENLEEVLLTNEHSPTSARVVLSFSNHEEFAKDFNCPTNSP
MNPPDRCRVW

mRNA from alignment at LSalAtl2s1453:5092..9768-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002385-698232 ID=EMLSAT00000002385-698232|Name=EMLSAT00000002385|organism=Lepeophtheirus salmonis|type=mRNA|length=4677bp|location=Sequence derived from alignment at LSalAtl2s1453:5092..9768- (Lepeophtheirus salmonis)
TTTGCCTGTGGCGGYTTTGTGAASAAAACAGTTTTCCCACCTGGTGAAAG
TCAAGTAAATATTTTTTCAGAATTGACAACTCTTCTAAATAATCAGGTAA
AACTGAGTTTTTAAAAAAATATTAATTTATGTATCATACATATTAAAGCA
CATGATTTTAGAGTTTATAATTTTATTGATAACATCAATATCTTTTTTAA
ACATTAAAAATAAAATATAAACATCTGGACCTAAAGTTTAAATTTGAGAA
CAGAATCTTAGGTAATTTTATTTTTCCCATTTGGTTAAGCAGTCAGAATA
AAATTAATCGATGACATAAAAAACTCATATTTAATTATTTTGTGATACAT
TACTGAAAAATAAATTGAATTTGCAAAGCATAGTAATCATGAGATTTTTA
AATAGATGAAAACGTTGCTGGAGAGGAATTCTACAAATAAAGATATAAGA
CCCTTTGTTTTGGTAAGAAACTTTTATCAAGCATGTATGAATGAAACTGC
TATTGAAACGGTTGGCCTGAAGCCTCTTCAAGAAATGCTTTCAAGGTTAG
GCGGTTGGTTAGATACMAAAGAAAATGATGATGTATTAACTAAGGGCACA
AAATATAATTGGACTAGTGACCTAAAAAAGTTACGAGATCATGGATATTC
CACAAAGTTTCTAATGCATATTGATATTTCACAAGACTTGAGTAATTATT
CTCGAATGAGTTTGTTCTTAGACAAACCAGAATTCGGAATATATCGAAAT
GCTCTAGTGAAAGGCAGAGGAGATTTTGAAGTTGAAGTAAGTTTTCTATT
AAATNTTGTGAGTAAATATTTTTATTCCATATTTTCCAGGCCTATTTTCA
ATACATGAAGGACGCAGCTGTACTTCTCGGACACAATTTCTCAGAAGTCG
AAGAAAACTTAGAGAATATTTTAAATTTTGAGATACAGATGGCCAATTTA
ACAAAATCAAACGATGAAATAAGTAATCTAACAGACTTGAACAATAAAAT
GCAAATTAAAAATTTAACAACACTAAATCCCTGTATTCCTTGGCTCCAAT
ATATCAACAGTTTGCTAAAAATCAATCAAGTATGATTTTCCTTTTAATTA
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCATTGTTTACGAACCATCTTATATTAGTGGTC
TCTATACATTGATGAAAAATTCTTCTTTAAAAGTCGTAAAAGATTATGTT
AGATGGAGAGTTATTGAATCATCGATACCATATTTGAATAAAGCAGCACA
AAATATTTCAAATGTATTTTATGAAAAGTNNNNNNNNTAAAACTGAGTTT
TTAAAAAAATATTAATTTATGTATCATACATATTAAAACACATGATTTTA
GAGTTTATAATTTTATTGATAACATCAATATCTTTTTTAAACATTAAAAA
TAAAATATAAACATCTGGACCTAAAGTTTAAATTTGAGAACAGAATCTTA
GGTAATTTTATTTTTCCCATTTGGTTAAGCAGTCAGAATAAAATTAATCG
ATGACATAAAAAAATCATATTTAATTATTTTGTGATACATTACTGAAAAA
TAAATTGAATTTGCAAAGTATAGTAATCATGAGATTTTTAAATAGATGAA
AACGTTGCTGGAGAGGAATTCTACAAATAAAGATATAAAACCCTTTGTTT
TAGTAAGAAACTTTTATCAAGCATGTATGAATGAAACTGCAATTGAAACG
GTTGGTCTGAAGCCCCTTCAAGAAATGCTTTCAAGGTTAGGCGGTTGGTT
AGATACTAAAGAAACTTATGATGGATCAACTAAGGGCACAAAATATAATT
GGACTAGTGACCTAAAAAAGTTACGAGATCATGGATATTCCACAAACTTT
CTAATGTATATTGATATTTCACAAGACTTGAGTAATTATTCTCGAATGAG
TTTGCTCTTAGACAAACCAGCATTCGGAATAAATCGAAATGTTCTAGTGA
AAGGCAGAGGAGATTTTAAAGTTGAAGTAAATTTTTTATTAAATCTTGGA
GTAAATATTTTTATTCTTTTTTTTCCAGGCCTATTTTCAATACATGAAGG
ACKCAGCTGTACTTCTCGGACACAATTTCACTGATGTTGAAGAAAACTTA
GATAATATTTTAAATTTTGAGATACAGATGGCCAATTTAACAAAATCAAA
CGATGAAATAAGTAATCTAACAGACTTGAACAATAAAATGCAAATTAAAA
ATTTAAGAAAACTAAATCCCTGTATTCCTTGGCTCCAATATATCAACAGT
TTGCTAAAAATCAATCAAGTATGACTTTCCTTTTAATTATTCATTATTTT
TTTCGCATCATAAAACTCATAAAAAAAAATTAAATTTGTAGGTACAAAAA
GAAGATGACATCATTGTTTACGAACCATCTTATATTAGTGGTCTCCATAG
ATTAATGAAAAATTCTTCTTTAAAAGTTGTAAAAGATTATGTTAGATAGA
GAGTTATTGAATCATCGATACCATATTTGAATAAAGCAGCACAAAATATT
TCAAATGTATTTTATGAAAARTTGTTTGGNNNNAACTAGTGAAAAAGAAA
GATATATGACATGCATTGATTTAGTTTCAGAAGAATTAAATCATCCTGTT
GGTGCCATGTATGTTAGAAATTTCTTCAAAGAATCTTCTAAGGAGAATAT
AAAAYATATGGTAGAGTCTGTAAGGCAAGTGTTCTATAAAATTCTGAATA
ATACCAATTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTGGAAAATATTGCATACCCATCAGAATATT
TAAATGATACAAAATTGGAGGAACTATATCAAGAGCTGAATATTGAAAAC
CTCACCTATTTTAGAAATCTACAAAATGTACTTACTTTTAACTTAAATTA
CAGAATTTCCAAACTAAATAAGCCAGTAAGTTACATTCATTGCCTTTATT
TGTCTATGGAGGGCTCATCATTGATGGTTTGTCTAATATCCAAAAAATGT
GTGACTACTTAGTCTAAAAAATGTCAATGTACCAACAAGCAGGTACAACT
AAATCTGAGTGAGTTATATTTAAAAAAAAAGAAATTAAGACGCTAGACTT
TTTGTAGTTACGAGATGAACAGTTGTTTTATTTTCTAAAGCTTTAAATTC
TATAGTTTTGAGGAAGAAATATATAGGTATAAAGTGCATAAGCTCTTGGA
TAATAGAAATAATACAAATCATTAATTGGAGAGACTGAATTTAACTAAAT
TACTTTTTAGAAATTAATTGAAATATTAATTTTATTAGGTTAATAAAACA
GACTGGATAACGAACGGGCAAGCTNGAATAAGCCAGTAAGTTACATTCAT
TGCCTTTATTTGTCTATGGAGGGCTCATCATTGATGGTTTGTCTAATATC
CAAAAACTGTGTGACTACTTAGTCTAAAAAATGTSAATGTACCAACAAYC
AGGTACAACTAAATCTCAGTGAGTTATATTTAAAAAAAAAATGGAGACGC
TAGACTTTTTGCAGTTACGAGATGAACAGTTGATTTATTTTCTAAAGCTT
CAAATTCTATAGTTTTGAGGAAGAAATATATAGGTATAAAGTGCATAAGC
TCTTGGATAATAGAAATAATACAAATTATTAATTGGAGAGATTTAATTTA
ACTAAATTACTTTTTACAAATTAATTAAAATATTAATTTTATTAGGTTAA
TAAAACAGACTGGGTAACGAACGGGCAAGCANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCTTAAAACTACTTATTGARGTATTAACTCAACAATTATAAATAACTAAT
CAAATCATTATTATTTCTCAGAATTGCTWCAAAAATCCAATAAAATGAAC
TATTATTTCATTGATAAAATAAAAACAATCAAATGTCATAAAAAAAATAG
GAATATTATAACCTTCAAGGTCAATTTACTAGAAATATTAAATACTATTT
CTTCTGGGATAGGATTAATTTTTAAATTATTTCTGAGAAAATTTATAGTA
ATGAAGCTAATCATGTATTATTTTTTATAATTATATATTATTCATAAGAA
ATTTCTTTGTTACAAATAAGGTGGCTTAGAGAACTGGTGGGACAATCAAA
CAGAGAAAAATTTCCTTAATCGGTCGCAGTGTTTTGTTGAGCAATATGGA
AATTATACCATCAAAAGTGTTAATCAAACAATTAATGGTAAACTCACATT
ACCAGAAAATATAGCAGATAATGGAGGACTACGAGCAGCTTATCGAGCTT
TTAGTAATTATATTATACCTGATAATGTACATATTTATATATATATATAN
TGTTACAGTTGAATGGAAAAATAACAACACCAAATCAATTAGACTTTTAC
CAGGATTAAACTTCACAAGTAATCAACTCTTTTGGCTTAGTGGAGCGAAT
ATGTGGTGCACAAAATACCTTAAAGAAAACCTAGAGGAGGTACTTTTGAC
AAATGAACATTCCCCTACATCTGCTCGAGTCGTTCTGTCATTTTCAAATC
ATGAAGAATTTGCAAAAGACTTTAATTGTCCGACGAATTCGCCAATGAAT
CCTCCTGATAGGTGCCGGGTTTGGTGA

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