EMLSAT00000002402, EMLSAT00000002402-698249 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002402
Unique Name	EMLSAT00000002402-698249
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s145	supercontig	LSalAtl2s145:1556659..1561178 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002402 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002402	EMLSAG00000002402-685168	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000010607	EMLSAE00000010607-719535	Lepeophtheirus salmonis	exon
EMLSAE00000010608	EMLSAE00000010608-719536	Lepeophtheirus salmonis	exon
EMLSAE00000010609	EMLSAE00000010609-719537	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780820	auto780820	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002402	EMLSAP00000002402	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s145:1556659..1561178+

protein sequence of EMLSAP00000002402

>EMLSAP00000002402 ID=EMLSAP00000002402|Name=EMLSAP00000002402|organism=Lepeophtheirus salmonis|type=polypeptide|length=392bp
MKSSMSTQKRKFGDPYPISAQSSGHYESRVVESWSQTEQFKLRGRHYWTI
VDFMRRAASTEVGNSLCSPVFSIPISDEGSSTSKISSDNCDTSLTFQLEV
FPNGEEGEDNSDYVAVFLTSRKMEELEVTYDFSVQKADGSPWGKIGNTCK
KFSPDQNSWGYGKAFSKARLIERMSELLPDGKLTIICNLEIYYDDRHTQG
KKPKLDFNITDTPTLQEEISTAFTRSELSDIQLKCGSITFHCHKIILACR
SDVFSAMFSHTDTKEARTNVVKIEDIDEETLEALLQFIYTDKIHDLNNFA
SSLLIAADKYNISRLKSLCEQKIAESIDVSNAADVLVLAHLHEADKLKTA
TLDFVCENMKSVSETSGWNRITESHPTLMSKVLVAMTSRLRT

mRNA from alignment at LSalAtl2s145:1556659..1561178+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002402-698249 ID=EMLSAT00000002402-698249|Name=EMLSAT00000002402|organism=Lepeophtheirus salmonis|type=mRNA|length=4520bp|location=Sequence derived from alignment at LSalAtl2s145:1556659..1561178+ (Lepeophtheirus salmonis)
CCACAACTACTACCTTGTACAAATATTGATCACGCGGTGCTTCGTTTTGC
TACTTGATTTTATAGCTATGAATTTATAGTATAAATTCTGTGGCCACTTG
AGAGTTGCCTGCTAGAAGTAAGAACTAAGAAGTAGGAATCAATCTAATTG
AACTCCCTCCCCAGGCCAGAGTGAAGCCCCTCTCCTTGCATCAAGTGTCA
GAAATTGAAGTAGGTGGAGTGAGCAGAGATGAAATCTTCCATGTCTACTC
AAAAGCGCAAGTTCGGAGATCCTTATCCAATATCTGCTCAATCCAGTGGG
CACTACGAGTCCAGGGTTGTAGAATCTTGGAGTCAAACAGAGCAGTTTAA
GCTTCGCGGTCGCCATTATTGGACAATTGTAGACTTTATGCGTCGTGCTG
CTTCCACAGAAGTTGGGAATTCCCTTTGCTCTCCAGTATTCTCCATCCCT
ATATCTGATGAGGGATCTTCCACCTCGAAAATTAGGTCCAATGTCTTGCG
CATCCTCTACTTTTCTTATCCCCTAAAATCAGTCGCAATTCATTTATTTT
TCATTATTTTTCATTAATCCTGGAAATCCCGAGATGTTAACTCTGCCATT
TTTTTAAAAGAGATTCCCTTCTTTTTTGACAGTTTGAATTTTTGACATGT
TTTTTGAGTTCGTCTAATACACACAAATACACACACCTAAAAAAAGCCCT
CATAAATTTCTGTTAAGATGTTGGACCGTTTTTGTTTTTTTTTACTTTAT
GATGAATAAAAAGCTCTGATAATTGTGATACAAGCCTGACGTTCCAATTG
GAAGTATTTCCCAATGGAGAAGAAGGAGAGGATAACTCGGACTATGTCGC
CGTTTTTCTCACTTCTCGTAAAATGGAAGAGTTGGAAGTGACCTATGATT
TTTCTGTTCAAAAAGCAGACGGATCTCCTTGGGGTAAAATTGGAAACACT
TGTAAAAAGTTTTCTCCTGATCAAAACAGTTGGGGCTACGGGAAAGCCTT
TTCGAAGGCGAGACTCATAGAAAGGTAGTAAAGTGATAGTGAGCTGGATC
AAGTAGTCACCTTTATATGTTTTGTTAATTGTCATTTCAGGATGAGCGAA
TTACTACCTGATGGAAAATTGACCATTATTTGTAATTTAGAAATCTACTA
CGATGATCGACATACGCAAGGAAAAAAGCCAAAACTTGATTTTAACATCA
CGGACACACCTACTCTGCAAGAAGAGATTTCTACTGCATTTACTCGTTCT
GAACTATCAGATATTCAATTAAAATGTGGAAGCATCACCTTTCATTGTCA
TAAAATTATACTAGCTTGTAGGTCTGATGTCTTCAGTGCTATGTTTTCCC
ATACAGACACTAAGGAAGCTCGCACCAATGTTGTGAAAATTGAAGACATT
GATGAAGAAACCCTAGAAGCACTTCTTCAATTCATATATACTGATAAAAT
ACATGATCTGAACAATTTTGCTTCCTCACTTCTTATTGCTGCTGACAAGT
ACAACATTAGTCGATTAAAATCTTTGTGTGAACAAAAAATTGCTGAGAGT
ATTGATGTATCTAATGCCGCAGATGTTCTTGTGTTAGCACACCTTCATGA
AGCTGATAAACTTAAGACTGCAACTTTAGACTTCGTTTGTGAAAATATGA
AGTCTGTTTCGGAGACTAGTGGCTGGAATCGTATCACAGAATCTCACCCC
ACGCTCATGAGCAAGGTTCTAGTTGCTATGACTAGTAGATTAAGAACTTA
GTACATTCAGACCTTTTACTCTCTAGACAATATTTTATCTGCGGTTATTT
TTTTTTTTTTCCTTTCGTACGATATTGATTCTGAACCATCATTTCAAGTA
CATTTATACATATATTTTTCATATTTTCTGTTCAATAGATTTAAGAACCA
ATTGTGATACTATCTTGCCCTTACATATTTTAAACCAAAATAAACGAATA
TCTTTAAAAAGTCGAAGGTGTATATTTTCTTGATAAAATCAATATGAAAA
AAAAACTTTCAGTAAGATAAAATTGTAATAGTACGAATATATGATTCATA
GTCGACCAAATAAAAGAGCGAAAACATAAGTTAACGATTAATTATATATT
GGCAGAAAAAGTCAGTCGTTACTTAGTTGAAAGTAAGGCCTGCATCTCTA
TAGGTTTTGAAGATCTTCTTGACAGAATTGATATAAGCAGCTGTACGCAA
ATCCAACCCCAAGTTGTACTCGATGGCAGTATTCATAATAGCTTTTGCAG
ATCTCTCCATGGTATAATCTAAGCCAGAATGAACAATATCTTTTTCAGAA
GCACCACTCATACGACGATCAAATTCAGGTGATGGAGTGACCGGAATTCT
GCCACCAACTCGTCCAAATCTACGTTCTAAGGAATCTTGGACGGATTGAA
GAAGATGATAATTTGATTCTCTTTCATATTTGAAAGTAAGACGTCCATAA
GAAACATGATTCAAATTTTTGAGCCACTCAAAATAAGAGACAGTAACACC
ACCAGCATTGACATACATATCTGGAATGACCAAACAGTTTTGTTCTCTCA
AAATAATATCTCCAGCGGGTGTAATGGGTCCATTGGCGGCCTCAGCGATG
ATCTTGGCTTGGATTTTGTGTGCATTGTTTCTATCAATGACCTTTTCCAT
AGCAGCTGGAATAAGGATGTCACACTTCTCGTATAGTAAATCATTTTTAT
CACCAGTATATGCCTGAAAGTAAGTATGCAAATATGGCAAATATAATCAG
AAACTCTGAAGTATATTGAGTGGTCTTACCTGAGCACCAGGGAACCCAAC
AATAGTGCCATTCTCGTTTTTATAGTCTTCTAATGCCTTGGGATCAATAC
CCTCCTTACTATAAATAGCTCCATCCCATTCTACAATACCGACGCATCTT
GCTCCAGCACGAGTCAGATATCTGGTAGTATGGAGACCCACATTACCAAA
TCCCTGAACGATAAAAGTTTTATCTCCAAAACCAGGTGTTTGTCCAATCA
TGGACATGTATTGGGCCTCATWAACAAAGTTCTCCAAGCCGTGAAATACA
CCTCTGCCTGTGGCTGAAGTGCGTCCGTGAATGCCACCTTGGTGAACTGG
TTTACCTGTGATACAAGCAGATGCATTTTGATCCATATATCCAATAGTGT
TGGCATACGTATCTGCAATCCAAGACATTTCTCTTTCTCCAGTGCCCATG
TCTGGAGCAGGAACATCAATACCAGGTCCTAAGAACCCCTTTTTGGAGAG
CTCCATGGCGAACCTCCTTGTAATTCTTTCAATCTCTTGATCAGAGTAGG
CCTTGGGATCAATGCGAAGTCCAGCCTTTCCACCTCCAAAAGGCACATCA
ACACATGCACACTTGTAGGTCATGAGTGCAGCAAGAGCCTTCACTTCATC
AGCACACACATCCATCGAGTAACGGATCCCTCCTTTGCAAGGGGTACGAT
GATGAGAGTGCTGCGCTCGGTAGCCCGTTATCATTTCGATGCTTCCGTCA
TCCCTTTGAAGAGGGAAATTCAGTTCCAAGACATGGGAACAGGGCTCAAT
AATTTTGAGAATCCCATGGACACGCTGGTGCTTCGCCTCTTCGGAAATCC
TTTGCTTAGACAACTCTCCTCGAAGGTTATCTTCCAGGAGCACACAGGCC
TTGTGGAAGTAATACTCCACCATATTGAAGAAGTTGGGATCTTCCGCCTC
AGGGATGYCCACCAGCCGATCAGGGATCTCCCATTTCCCTAGAGACCCTC
CTGATCCTGTGTGCAAATTCACACTTGCAGGAGCCAATTTCATGGCGCTC
GCTTCTCGCAACGCCGTCCTCAGACCACACTTCAAAAGACTCACCATTTT
ATCACTAATTCCACTTTTATCTACAAGGAATAATTAAATAAGTCACTTAA
TTAGATATCAATATATAAGATGGACTAAAAAGTGAGTGGGAAAAGAAATG
GCAATTGCAGTCACTAGAATTTGATTGATTCTAAAAAAGAATCTCTTGCC
TATTTCTCAAAAGGGGCTCGCCCAACAGGKTTCATTCAACATTCATGGAG
KCAGAAGAGTAAGAGTGTGACACTACAACCCTCATGTTTTCAACTAGGAG
TCTCACTCTGACTCAGTAGAATCAATAAAAGACTATAGACTTAATAAATA
TTATATTAAATCTAGACTGATTCAGTTCAAGGATTCAGAGTGCGACAAAC
AAGAATTACTTGTACATTTACTTATAGATAGATTACAATTTACATCCCTC
AATCTACGAAAAAAAACCACTTTATTTAATACTGTCATGATCCAAGTTAG
AAACAAGATTAAAGGCGGAGATAATTATGTATTTGCACCAAGCTGAACCA
ATGGCAATGGGTCTACTTACTTTAAAATACTACTACTTAAAATAATTTTC
AAATCACACAATTAATATTTCTAGAAGCAACCGAACGATTTGCCGTCACA
AATCCAACTGAAGTAACGTCACTTAATTCAGAATCTTTTTCTTTTTTTAA
AGAAATTGACAACTTTTAAA

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