EMLSAT00000002409, EMLSAT00000002409-698256 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002409
Unique NameEMLSAT00000002409-698256
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s145supercontigLSalAtl2s145:1702480..1706091 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002409 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002409EMLSAG00000002409-685175Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010631EMLSAE00000010631-719559Lepeophtheirus salmonisexon
EMLSAE00000010632EMLSAE00000010632-719560Lepeophtheirus salmonisexon
EMLSAE00000010633EMLSAE00000010633-719561Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780853auto780853Lepeophtheirus salmonispolypeptide
EMLSAP00000002409EMLSAP00000002409Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002409

>EMLSAP00000002409 ID=EMLSAP00000002409|Name=EMLSAP00000002409|organism=Lepeophtheirus salmonis|type=polypeptide|length=922bp
MASNSRIQQHLSNLIPSSNTTTLDQEMDEFKKEQTNAMLKSLNSNESPIK
EKHLRTLLIGSFRLKNSESFWVTLRDVVPLHGNELVVWKIPILTHRLFFD
GHPNYTKSSISQKKWLIDLGNTWRHIGTGYGTLIHNYCELLTKKIDLHTG
HSNIIPSGNFMVKNDSQALGNDFYIYEVCVDLFDYQDKLLNFINSVLETF
DALKSNSVSSSAQCRLSPLITCINESHKIMEISTSFLAKVYKKLPPDSLE
GHVLRYNEIYNGLKAFYDRCSTLTYFLGLVNVPQMPKNPPSFISSYNSKE
EEQITNGEDKQLALIDHPNQIKQEELKLFVILEELDRQSSRCHTLECALK
EKEEENSFLKAEITRSEETITNQKSDFITSFEKYRNKQEEEKELIKKQFS
ESAKIDNKVEESNSKLMKLKEMYQKLRKEHIELLRNNAELQKSMSKNQDM
SKQDVEKMRSKIYDFLRDSSLRKIISDNFEEEDDITSPLEECFKSFKDKL
EETDSELENYRDKNTILEKELLDKNSINANISLENTRLISHRDNLEVAIQ
KLTGEREALKELSDELMISRDSMKVQLDSNNDFVNRFKDKLLCIVERPEW
SVQNCVDEIQHSKVSLEGDSEIARLLSLLFVLLSASKGSKNSRLYDKVAE
LIRSFLLQEFDSEKMINFLQDLDFIEDESDDQLSVEDLDSMFSKEISEME
KSIAAASETMNKLLLETRSKYSGDKLEYNTQIIDSCSSLVEAVRNLIAVS
KDLQNEITLLYGVESKEYYKKNHRWTQGLISAARAVGAGANFLMTSADEX
ARRDFNAKFESLIAASQEVAASTAQIVIASKVKADPKSDNLKTLTSRSKL
VTEATAKVIAVCRTTSQIREDEKDLDFSSLTPHQTKLLEMETQVKVLELE
SDLEKERKKLFEYRKLHYKHNE
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mRNA from alignment at LSalAtl2s145:1702480..1706091+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002409-698256 ID=EMLSAT00000002409-698256|Name=EMLSAT00000002409|organism=Lepeophtheirus salmonis|type=mRNA|length=3612bp|location=Sequence derived from alignment at LSalAtl2s145:1702480..1706091+ (Lepeophtheirus salmonis)
TAAAGAGATTGAATAGAATAGTATTCTCTTGTTTAAGGATGGAAGGATAC TGTGTGCGGGGAGATCAAATTTAATTCTTAAGTATTATAATTTATCATCA TGGCATCCAATTCCCGAATACAACAGCACCTATCAAATCTTATTCCATCT TCCAACACAACCACACTGGATCAGGAGATGGATGAATTCAAAAAGGAGCA GACAAATGCAATGCTCAAATCCTTAAATAGCAACGAATCCCCGATTAAAG TAAGATATTTATTTATTGGAGTAATGTTGGATTTCGCCTAAATATTTATT TATATTCTTTTCATTAGGAAAAACATTTACGAACACTTTTGATCGGCTCC TTCCGTCTCAAAAACTCTGAATCCTTTTGGGTCACTCTAAGAGATGTTGT TCCACTCCATGGAAATGAACTTGTCGTATGGAAAATTCCTATTTTAACCC ACAGACTCTTTTTTGACGGCCATCCAAATTATACAAAGAGTTCCATTTCT CAAAAAAAGTGGTTAATTGATCTTGGAAATACGTGGAGACACATCGGCAC TGGCTATGGAACTCTAATCCATAACTATTGCGAACTTCTTACAAAAAAAA TTGATTTACACACAGGGCACTCAAATATAATTCCGTCTGGAAATTTTATG GTTAAAAATGATAGTCAAGGTATAACCTATACGTGCACATATTTGTAATG AATAATTTTTGACATATGCACTTATAGTTTACACAACTAATAAGATAGTG CATACTTGATTCTCTAATTTGATAAGATATAATTTGTATACATTACAGCA CAAAATAATATGAAGTACATCTATATCAATTAGAAATTATTTTGTATTTT CTTAAATATTATAGCCCTCCAAAAATGAATGATTTAACGTTTCTCTTTAT CTTTTAAGCTTTAGGTAATGACTTTTACATATATGAAGTATGTGTGGATC TGTTTGACTATCAGGATAAACTACTGAATTTCATCAATTCCGTTCTTGAA ACTTTTGACGCACTAAAATCTAATTCTGTTTCAAGTTCTGCACAATGTCG ACTAAGTCCCTTAATCACTTGTATCAACGAATCCCACAAAATAATGGAAA TATCAACATCTTTCCTGGCTAAAGTTTATAAAAAACTGCCCCCTGACAGC TTGGAGGGTCATGTGTTAAGGTACAACGAAATATATAATGGCCTCAAAGC ATTTTATGATCGTTGTAGTACACTAACTTACTTCCTTGGTTTAGTGAATG TTCCTCAAATGCCAAAAAATCCACCGTCATTCATAAGTTCGTATAATTCT AAGGAAGAAGAACAAATAACAAATGGTGAAGATAAACAATTAGCTTTAAT TGATCATCCCAATCAAATAAAACAAGAAGAACTCAAGCTGTTCGTGATTT TAGAAGAGCTTGATCGACAGTCCTCTCGATGTCATACTCTGGAGTGTGCT TTAAAAGAAAAGGAGGAAGAGAATTCCTTTCTCAAAGCTGAGATAACGCG TTCGGAAGAAACAATTACAAATCAAAAGTCGGATTTCATTACTTCTTTCG AAAAGTATAGAAATAAACAGGAAGAGGAAAAGGAGTTGATCAAGAAACAA TTCTCAGAGTCTGCTAAAATTGACAATAAGGTAGAGGAGTCGAACTCTAA GCTCATGAAACTCAAGGAAATGTATCAAAAGCTTCGTAAAGAACACATTG AACTCCTTCGTAACAATGCTGAACTTCAAAAGTCAATGAGTAAAAATCAG GATATGAGCAAACAAGATGTAGAGAAAATGCGTTCGAAAATCTATGACTT TTTACGTGATTCTTCTCTTCGAAAAATTATTTCTGACAATTTTGAGGAAG AAGATGACATTACCTCACCACTGGAGGAATGTTTTAAATCCTTCAAAGAT AAGTTAGAAGAAACAGATTCCGAATTAGAAAATTATAGGGACAAAAATAC AATCTTAGAGAAGGAATTATTAGACAAAAATAGTATAAATGCCAATATCT CCCTGGAGAATACGAGATTGATTTCTCATAGGGATAATTTGGAAGTTGCC ATACAGAAACTTACCGGGGAGCGTGAAGCTTTAAAGGAATTATCTGATGA GCTTATGATTTCTAGAGACTCCATGAAGGTACAACTTGACTCAAATAATG ATTTTGTCAATAGATTTAAGGATAAGTTACTGTGCATTGTTGAAAGACCG GAATGGAGTGTTCAGAATTGTGTGGATGAAATTCAACATTCAAAAGTAAG TCTAGAAGGAGATTCAGAAATTGCCAGACTTTTATCTCTCTTGTTTGTTT TACTTTCTGCCTCAAAAGGGTCCAAAAATTCTCGATTATATGATAAGGTA GCAGAATTGATTCGTAGTTTCCTATTGCAAGAATTTGATTCCGAAAAAAT GATAAATTTCTTACAAGATCTAGATTTCATAGAGGATGAAAGTGACGACC AACTCTCTGTTGAGGATTTAGATAGTATGTTCTCAAAAGAAATAAGCGAG ATGGAAAAGTCAATTGCAGCTGCTTCTGAGACGATGAATAAACTTCTTTT AGAAACACGTTCAAAATATAGTGGTGATAAATTGGAATATAATACTCAAA TAATTGATTCTTGTTCCTCTCTCGTAGAGGCAGTGCGGAACCTTATCGCA GTTTCCAAGGATCTACAAAATGAAATTACTCTACTTTATGGAGTTGAAAG TAAAGAGTACTACAAGAAAAATCATCGATGGACTCAAGGTCTTATTAGTG CAGCTAGAGCTGTTGGAGCTGGAGCTAACTTTTTAATGACATCCGCTGAT GAAGKGGCTAGACGAGATTTTAATGCAAAATTTGAGTCTTTAATAGCTGC ATCGCAAGAAGTAGCAGCCTCAACTGCTCAAATTGTTATTGCCTCCAAAG TCAAGGCGGATCCAAAATCTGACAATTTAAAAACCCTCACTTCTCGCTCG AAGCTCGTTACTGAGGCAACAGCTAAAGTCATTGCTGTATGTCGAACCAC ATCTCAAATTCGCGAAGACGAAAAGGATTTGGATTTTAGTTCATTAACTC CACACCAGACAAAACTATTGGAGATGGAAACTCAAGTCAAAGTTCTGGAA TTGGAAAGTGATTTAGAGAAAGAAAGGAAAAAACTATTCGAATATAGAAA GCTTCATTATAAACACAATGAATAGTTAACAACTAGGAAAATGATTTACA AGTACTGTTGATGCATTTAATCTATTTTCAAAGTCATTTTTAAATATTTT TGTAAACACAAATTATTTTATTTACACATTMAAGCCACATCTAGTATATA AATAAGTTAATATGACTTCTTTCAGCGAATTTTTATTTTATTTACTTTTA AAAGCATTTCTTTTTTTATATCATGAAATCTAATTAATTAATTTATCGAT GATCACAATTGCCTTATCTGTGAAATGAATACATCACAAATACTTCCGTC CTTATAAAACGATATTATTTTTTCCCTCTATTAAAAAAATGCATCATAAA TTACCTGAATAAAAAATATGTGTAGAAATTAATGTGATTAATAATGATTA ATTAGTTATATAATTCGACATCTTCCTGAAAACCTGTAATATATTTTAAT AGTTATGTTCTT
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