EMLSAT00000002437, EMLSAT00000002437-698284 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002437
Unique Name	EMLSAT00000002437-698284
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1466	supercontig	LSalAtl2s1466:32261..38393 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002437 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002437	EMLSAG00000002437-685203	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000010785	EMLSAE00000010785-719713	Lepeophtheirus salmonis	exon
EMLSAE00000010786	EMLSAE00000010786-719714	Lepeophtheirus salmonis	exon
EMLSAE00000010787	EMLSAE00000010787-719715	Lepeophtheirus salmonis	exon
EMLSAE00000010788	EMLSAE00000010788-719716	Lepeophtheirus salmonis	exon
EMLSAE00000010789	EMLSAE00000010789-719717	Lepeophtheirus salmonis	exon
EMLSAE00000010790	EMLSAE00000010790-719718	Lepeophtheirus salmonis	exon
EMLSAE00000010791	EMLSAE00000010791-719719	Lepeophtheirus salmonis	exon
EMLSAE00000010792	EMLSAE00000010792-719720	Lepeophtheirus salmonis	exon
EMLSAE00000010793	EMLSAE00000010793-719721	Lepeophtheirus salmonis	exon
EMLSAE00000010794	EMLSAE00000010794-719722	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769959	auto769959	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002437	EMLSAP00000002437	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1466:32261..38393+

protein sequence of EMLSAP00000002437

>EMLSAP00000002437 ID=EMLSAP00000002437|Name=EMLSAP00000002437|organism=Lepeophtheirus salmonis|type=polypeptide|length=315bp
MNTQVLLLLLVSQYSYGKPLDGKILGLINIVHFSNKQCTXASSTSPSMNR
HGTCFTANECESMGGFVDGNCAFGFGVCCVLRVRECGGRINKVIILRLFI
HRKCDNNICRIRLDFKTFEIQDPTSTGDCGNERLDIVSSTGSLIPTFCGS
LTDQHMYISTNPTSPNNLGSLTINFNPNSNIQRRWDIKVSFFHCQDPEMS
FNFGQLIRNTFYNTCFRQERDFCGINYSVSSLVNSDPFKIGTQDTSKTSV
ADCSNARLTIPSQISNTFCGDFLNNMSNEKLNGVISSTTFMLRHEVNNMD
ITGTGYNLNYVQTPC

mRNA from alignment at LSalAtl2s1466:32261..38393+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002437-698284 ID=EMLSAT00000002437-698284|Name=EMLSAT00000002437|organism=Lepeophtheirus salmonis|type=mRNA|length=6133bp|location=Sequence derived from alignment at LSalAtl2s1466:32261..38393+ (Lepeophtheirus salmonis)
CTTGTTCTCAGTTAGTTTGTTAGTTCCTGTTGAGGGATTGGAAAGAAACT
ATGAACACTCAAGTCCTACTCTTACTTTTGGTCAGCCAATATTCTTATGG
AAAACCCTTGGATGGGAGTAAGTATAGACTCATAATATACCATTCATTCA
TAGCATATTAGAAAATGTCGAATTAATCATGTTATTGTTTTCACTATTAA
AGAGATCTTAGGCCTCATCAATATAGTCCATTTTAGTAATAAACAATGTA
CAMCAGCCTCTTCTACATCCCCAAGTATGAATCGACACGGAACCTGTTTT
ACAGCAAATGAATGCGAAAGCATGGGAGGATTTGTTGATGGAAACTGTGC
TTTTGGATTTGGAGTATGTTGTGTTTTAAGGTAAGACATGTATAGGCTAG
TAAATACAAATAAACATGATATAATTGAGAGAAATGACGACTTTTCTTTC
TTTCATGTTCAATAATAGAGTTCGAGAATGCGGTGGAAGGATCAATAAAG
TAATTATATTGAGGTTATTTATTCATCGAAAATGTATGTATCTTGGCAAA
TGAATCAGTTTCCATTATAGGAATATTTATTAAGTTTAAGGTACATATAC
TATACATACTTTCAGAGGTAGGAGATGATAACTTTGCAGGGAGACAACTT
CAATTTTGAGAGAATATTAATAACTAATTCAATAGAAATTTGGCAATAGG
ATTTTTTTTATTTTTAAATATGGACTTTTTTATAGAAGACATCTCACGTC
GTTAGCTTTGTTCGATATCGAAAACTTTTCACTCATAAAGGGCAAATTGT
GTATAAAGTATGTACGCAATGTTTTGGGCTTTTTTTATTTCACAAAGGGG
GTACTTTATTATAGTTTGTTTTCGTAGTTTCAACGTACTTTGTATGTACA
TMGCCCCAAACRGTGGCTTCGYTAGCCTCTTGGGGGACGGCAAGAGGCCC
TTAAAAGCTTCTGAACGACCCTCTAATTTTTTAAATCATATCTTATATAT
ATTTGTCAATCTGTTTTTGGTGTTATCACACATGGAATCCAAAATGGTCG
AACAGATCAGTCTGTAATTTAGTAAGTAGACCTATTAAATAACCAAGTAT
ATTTTTTTTACACCTCTAAGGTAATTCAGAGCCTGTTTGTGACCAAAATA
AATTTTTTTTGCCTTCTTTCTTTCTATGTACATATCCCTGTCTCCTTTAT
AGTATATATAAATAATACCTATTTACATAAGTAATTACGTAACGGTTCCA
TAATTGTGAGGATTTTTTGGTAGCAATTTAACATGAGCTAATTTTAATGT
AACTAATCAGTGTTGTTCAGAACACTGATAAAGGAAAAATAAGCTAGGAA
ATTGATAGCTGAAACGCCCCACTAAGTTTCAAATGAATACTTTATTTTGT
AAAGTTTTATTTCTGGGGTTTCAAAGTATTATACAAAATATAATTTTGAT
ACTTTCCCCTAAATTGGGAGGGGACACTCCCTCCAAAGTCCCTACACTTA
TCTCAGAGAAAACTAGGAAGTCTTGATAAACAAATATGAAATGATACAAA
AAGATCAGTTCTACATACATCTTACACTAACATAAACATGGGTTGTAAAC
ATGTAACCTTTGAAATCAACCGAAAAGTATTGTACACACATGTCGGCAAA
ATGTATTGTATTTGATATAGCACGATATACCATGTACATGTACCTCCTAC
CGTAAATAATTATTTCCATTAAGTTGGTTGCATAAATAAATGCGTGTCGT
AATATACATATATATATTTTCTTTTGATTCTAAAAGAAAATATGTAGAAA
TTGATTTCCTATAACTTGAAGAATTATATTAAGAATCGCTTCCACATTTA
TTCTTAAATAACACATGGACTTAAAAGTCCGGGGCTTGACAAAGAAAACA
CGTTTTTTTCTCATTCAAAATTGTCTTTTTTTAAATAATTATTTTATTTG
CTTTATGGAAATGAGTCCCCATAACCCTTTTCAAGGCATTGCCTACCTTG
AACGGTATTTTTTATCGTCAAAAAGCAGTGTAAAGTTAAAAACGAAAAGT
GTTTTGATCCATTGTTTTGAAAATAACAAAAGTAGGTTCACACTTAGCAA
AATAACTCGTACACTAAAATACAGATTGTCATAAAATTTCGAAGACCATT
TTTTGAAGGTTGGTCCTTACTGAAATGAGGGAATTAAAATAGGAAATAGT
GCCTTGAAGCCCGGGATATTTAAGTACATGTGTTACATATGTACATAGAT
AAAGTGATGGAAATAAGTATTTGATTCCTTGCCGATTTAATAAGTTAGCC
TATTGATAAAGACTTTCTATCAGATTGAGGTCCGGAGCACCGTCCCTGAA
ATATATTTGCAAGCGAGGGGGGGAGGGATTATATAATATATGCATTTGCG
TATTGGGGAGGGGACAGTGGCTCCAGAGACTGGATACGCTACTCCTTGAC
CTTAATGTGTGTCCAAGGGGTCCGCAGGAAGGGAGGGGCTGTAGCTGCAA
CCCCCCCAAATCAAGGATTTTTTTTCGTGAGGATGAAAATTTTACGCAAA
AATTGTGGGGAAAAAATTCCACAAACCAAYCCCCGCCTAAATATAATCCK
GCAGCCGCCCCTGGCTTCTCCTTGGGCCACTCCTTTAGATGCGGTGAAGC
CGTCCTTTTCTTGAGTAAAGAAACATCACGAAAACCTTATGTTTCCATCC
CCATGCTTGCCCGTGGGGATGGCTTTCTTGGGGTTATACTCTGCATTTTT
CTTAATCCAAACAATTTTTTGTCCATATTATTTTTCTCACTGCTCAAATC
AACCTAGCTTTAAAATTATCGACTGTTCTTTGTGATTGGGTAAACTTAGA
GTGGTTTAGTTATCAAATTATTCTTAATTTTGTTTTGATGGGCGCGGAAA
AGATATCGAGTAACATAACCTATACCCCATTCCGTTGTTCTATATACAAT
ATCATATGTAGGTGTCACAACTTTTGTCGAAGTTTGAAAAAAGATCAAAT
TTCTTTATTTTGTCAATACGGTTTAGTATAAATCAGTATTCTTATTTTTG
TAATAAAACCATTGTGATATACATTTTTATAAACTATAAAAAATATTAAT
TGACTTTTATCTGTAAAGTCACTCTATGGAGCAACAGGGAAAAATAACGT
AAGGAAATTTTGAACATAGATACAGGGTGGTCCAGATAATTTTGGAAAAT
CTCTAAAGGCTTATAACGAACGAACCATCATTTTTTTCTTTTTTGAAACC
CACATTTAATAATATTCAATTATTCATAATGAGATCCGTCTCTCTTGATA
ACTTTGGCCACTCGACCTTATGCGGATCTTGCATTGCCAATGTACTGGTT
CTGGTTTTGCGCTTTTAATGTACANGGATGAATGGAGAAGCGCAATGAAG
AAATTATACCTTCCAACAAGAGAGTTCACCGACTCACAAGGCCAAAAAGT
GCAGGCCACAAAATTTCCTCACTTTTGGAGATGGGATTTTTGCCCTACAA
ACAGCTCTGACCTGCACCGACTCGAATTCTATTCTGGGGGAGGGTCGAGC
ATGATGACTATGATAAACATCATTTGTTTATGGTGGACCTGAAGATGTTT
ATTACGCGTACAATAGCAAAGCTGGATCTGTACGAGGTCGCCCAGGCCGG
AATAATACTTTAACATAATCTTTATTGACTAAATAAAGAAATTGTATCCT
TTTTCAAACTTTGATCGAGATGTGCCTCTCTAAAGAGAACATCGTAGAGC
AATGGCATAGGTGATTTTCGTATCACATGCCATCTTTTCCGCACTAGCCT
TGATGGATATTCCGAAAAAGTTCTAAAAAAAAACCCACTCTAACGCACAT
CGTTTATGTAAACTATAAATAAACACATATTTGCAATCAAAACTGATTAA
AATCAATTTCCTTTTACAAAGAATTGTACATACTTACAAAATCCAGGATT
CTCTTCCTCCTTCAGTCAAACAACTGGACCATGCCAATTTAATTTTGAGA
GTCCTTCAATAAATGGTAAATAGACTACATAATAAAATAAGATAACAACA
TATTTGCCCTCAAGAAAAATAATTTTCATTTTATTTTTACAGGTGACAAC
AATATTTGTCGAATAAGGTGAGTCGAGTTATATAATAATTCATTGAATAG
TCAAATAAATACAAATATTCAGATTGGATTTTAAAACGTTCGAAATTCAA
GATCCTACCTCAACTGGGGACTGTGGAAATGAAAGGCTTGACATAGTCTC
ATCGACAGGATCCTTGATTCCTACCTTTTGTGGATCATTAACTGACCAGC
ACAGTAAATATTAGATATTATGCACATATGCGTACATTCATTATTTGTCC
ACNTATTCTTTCCTAGTGTATATTAGCACAAATCCAACAAGTCCAAATAA
TTTAGGAAGTCTAACAATCAACTTTAATCCCAATAGTAATATACAAAGAA
GATGGGACATAAAGGTGTCTTTTTTCCATTGTCAAGATCCTGAAATGTAA
GTTGATCTTAGATATACTGTCGAGTCCCAGAGTTCAACTGCCTCAATACT
CAGTCTAATTGTGGATTTTCAATTGTTTTTTTGAAGAAACGTAATATTTC
AATTTTTTTTCCTAAAAAAATCAAAAAACTAGAGCAAAAATATTATATAT
ATATAACCATGCAGACGTCTCTGTATAGTTTGTACTTCAGTCACATGCCA
CTAATTGGCGTTGTTGTTCAACAGATTTTAAACCATTGTATGGATTTCCT
CCAAACCTTGGTAGAGTTTTTTTTTTTTTAGAGTTTTATGTACTTTTTAG
GCCAAAAATCATAGTGCCCAATAATTATATATACATATATAAGGTCCTTT
TAGGGTGAAAAATTGATGGTTGGGAATGGATTAGTCCGTTTTTTTCTTAT
GGGGAATTCTGATTTAAAACTTGACTGTATCCCCTCTTGATTTCTTGGGT
TCTACCACTGTTAATTGAAATACTATATCATACCAAAACGCTTTTCCGAC
TGACGTTTGACTTCCGCCACGTTTTTTAACAGTGACGTAAAGAGTATAAC
TCTTACCATGAGTAGTTTTATATCAATTTCCTTGATTGTTACTGTTGTTA
TACTCTATGACGTCAAAATATGTCTATCTTGCCCATCAGTCGGTACGGTA
CATCAAATTGAAAATTCTGGCAAGCCCGATTATATGATTGCATAATCTTG
TATTTCTATTAATCTTGGTTCTACTTTATAAATTATTCATTTATTTGCTT
TTAAGCCCACCGGATGGATGTCTACAATACTTTACGGGTACATCCGGGAG
MTTTAGGAGCTTCAACTTTGGGCAACTCATTAGGAATACATTCTATAATA
CGTGCTTTCGTCAGGAAAGAGGTAATATAATCTACTAATATTCAAGGGTG
TTATCTTCAAATTAATATTTTCTAATAATATGAAAGATTTCTGTGGGATC
AATTACTCTGTAAGCTCTCTCGTCAATTCCGATCCTTTTAAAATTGGTAC
TCAGGACACCTCTAAAACATCTGTTGGTGAGTTTGAATATCATGTATTAT
GTAATCGACTTTTTTCCTTAACCTAAAATTAAAAATTGAATACATTCGTC
AGCTGATTGCAGCAATGCTCGACTCACCATTCCATCCCAAATATCAAATA
CATTTTGTGGGGATTTTCTCAACAATATGAGCAATGAAAAATTAAATGGA
GTGATAAGTTGTAAGAAATTGAAAGAAAATACATAGACCCTCAAAATCAT
TTCCCTATTAATTTATACTTTTCTTTATATRCCAGCCACGACTTTTATGC
TACGTCATGAAGTAAATAACATGGATATCACAGGAACAGGATACAATTTA
AATTATGTTCAAACTCCTTGCTAAAAATACATACCTAGCATGTAATACCT
ATACATATTAAATTACATATTTAAAATATCAAAAGCTTCCCTGGACCCTG
TTGATTTTAACAACAGTCCATACATATTATATCAAGACTCTTTCAGGCAT
AAAATTGTTTTAATTTCACATGAAATAATAAACTATAATCAGAATAATAT
TTCAATCTCAAATACACACAATAAATAACTTCTATGATGAAGACATAATC
TCCTCCATGATTTCAATTAAATAAGACTTTAAA

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