EMLSAT00000002470, EMLSAT00000002470-698317 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002470
Unique NameEMLSAT00000002470-698317
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s147supercontigLSalAtl2s147:30711..37893 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002470 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002470EMLSAG00000002470-685236Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010972EMLSAE00000010972-719900Lepeophtheirus salmonisexon
EMLSAE00000010973EMLSAE00000010973-719901Lepeophtheirus salmonisexon
EMLSAE00000010974EMLSAE00000010974-719902Lepeophtheirus salmonisexon
EMLSAE00000010975EMLSAE00000010975-719903Lepeophtheirus salmonisexon
EMLSAE00000010976EMLSAE00000010976-719904Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769998auto769998Lepeophtheirus salmonispolypeptide
EMLSAP00000002470EMLSAP00000002470Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002470

>EMLSAP00000002470 ID=EMLSAP00000002470|Name=EMLSAP00000002470|organism=Lepeophtheirus salmonis|type=polypeptide|length=2093bp
MYIKQVIIQGFKSYREQTVVEPFDPGHNVVVGRNGSGKSNFFYAIQFVLS
DEYSHLRPEQRQALLHEGTGPRVMSAYVEIIFDNSDGRLPIDKEEVFLRR
VIGSKKDNYFLNKKMVPRSEVMNLLESAGFSRANPYYIVKQGKINQMATA
PDSQRLKLLREVAGTRVYDERREESKGILKETEAKREKIEEFLKTIEDRL
STLETEKEELKEYQKHDKTRRALEYTIHDRDLQETRRKLSDMENKRKNSG
EEAEKLRSALQEAQESAKSTSKDVKELKLKENAAKEERDALNAENQQHTK
EKTRLEFVIKDLKDEVTGDNKSKDRAEQELSKLRETISKKETELEGIRPV
YDEMKKKEDGCTRELSLKEQKRKELYAKQGRGSQFTSKDQRDNWIKKELK
SLNKQIKDKGEQIERLSEDLKRDAKKKVELDKRIDECTGEQDSHRTNIDD
HNKGFYELKKRKDTLQSERNDLCRKEMNLQQSLSALKEELSKADQTLRSM
AGKPILNGRDSVRKVLQIFKNKGGHFESIADSYHGLVIENFECEQSIYTA
VEVTAGNRLFHHIVDSDKVGTQILKEMNKQKLPGEVTFMPLNRLHVRSID
YPQTKDAIAMVTKLEYEDRYDKALRYIFGRTLICRNLEVATQLARTTGLD
CVTLDGDQVSSKGSLTGGYFNKSRSRLEIQKTRSEKGEEIANQEQEMVKL
RQQLNEIEANINKIVSEMQKMETKNSKAKDVFDKVKTDVRLMKEELNGIE
RNLHPKDRSLTQLKSSLEAMQTTKEGLEAELNQELLAXLSSKDQGEVDQL
NDDIHRLKQENKKAFAERMRLEAQKNKLENLLTNNLNRRKDELVQALQEI
SVEDRNRQLENSTSELDSLDGRIKSTQENVKSIDKKLQDIQKKRKKGQAE
LESYRLREREIAEKIEEDAKELEKMASKQTVYQTKIQECTKKIRELGSLP
TDAFDKYKNVSQKQLFKHLERSQTELKKYSHVNKKALDQFISFSEQKEKL
MKRKEELDRGNKKIQDLMDVLEHRKYEAILFTFKQVSKYFQEVFKKLVPT
GQGTLSIKREKDDEVGSDDQAHRLENATGVSCSVSFTGRNAEMKEMAQLS
GGQKSLVALALIFAIQKCDPAPFYLFDEIDAALDAMHRKAVADMIHELAD
GAQFITTTFRPELLQHSNKFYGVKFRNKVSHVDSDLNTSRRRKHKDVLLK
RRRLLPNVVPSVFQVLGGSDIKSYQSLEDIQDELKKLGHSTLPKDVFVIS
KEGESLHFLGLTFDKSSIAPKINYSLNVFSDLTYSMMVGEQMIQENLCKS
SRSHISSFMALNDALNLLKNSFLESKPHKGTKELEMTLIRIKKSVSLLPE
SDKRRNKLLFILEQLDCILHSREKYSKSLIMLGVLWNNVAPRLYRSLSNS
YESEMLLMLPPIPVIRSHTELPIQKLKDRYSRCSSDAEKMLSLLITENVS
SSYSGIFKSGKYSTHGHRRTLLDFCIKGIHEGNTNDNKEPDIHRFVSLSD
LNCIIIRDKVFELIETCTKIGFKIVSLVLDIGSNFHEFYTRELFEESSNG
FSAKSMIINDDHERFIENPYDDTLGNKIYVIFNPKHCVQSLLDHWIEQNT
FECPPFQGVEMSNPEMMKIEELFQQDSSQNKYNYRRSELRNPNNIFNELI
LSSLKKGPTYEFVKVILKFSKITQELKFTTPIWNAGDSRIQFLREFYEWI
TAWWMSNGESGTPSIKIMRELRVTSSGIADLMCYLFENNGNVIDISPGRF
SCQVEEIDSWKVYPFNHRSLIGLVSILTNKKRIINIKGLISLVGSEMENL
DIIFNYTDSREQRNYSCNANNYLIDEKVSSIIYPLEEEDLYFKPTRENDL
VYILAGFIAESLLQTLDCDSPCQGCFELLVNIKDAPTLIFEDCSARKDVE
LAFANTVSEKGMSAPSQLVFACCLIIRKIYIGLNMSEKIRSLLDNNSLKT
SRDIFFRIIETKMNIFEETARMINASCDSTEKHPFKSYFKSLCDMLYDVF
SCNSFRRKRKILNLMPVCPPKDIKFEEEQSSSNKMDSSKMKEVSECKRSK
EADIESDQTKIVTKLNNEVSALEFTTHHNNSENILIVSGSDNI
back to top

mRNA from alignment at LSalAtl2s147:30711..37893-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002470-698317 ID=EMLSAT00000002470-698317|Name=EMLSAT00000002470|organism=Lepeophtheirus salmonis|type=mRNA|length=7183bp|location=Sequence derived from alignment at LSalAtl2s147:30711..37893- (Lepeophtheirus salmonis)
ATGTATATAAAACAGGTGATCATTCAGGGGTTCAAGTCCTACCGTGAGCA
AACGGTGGTTGAGCCCTTTGATCCGGGTCACAATGTAGTTGTCGGGCGAA
ACGGCTCCGGCAAATCTAATTTTTTCTACGCCATTCAATTTGTGCTGAGT
GACGAGTACTCTCATTTACGACCTGAACAGCGTCAAGCGCTTCTCCACGA
AGGAACGGGACCGCGTGTGATGTCTGCCTATGTGGAAATCATTTTCGACA
ACTCTGACGGACGCCTTCCCATCGACAAGGAAGAAGTGTTTCTCCGGAGA
GTCATTGGCTCCAAAAAAGACAACTACTTCCTCAACAAGAAAATGGTTCC
ACGCTCTGAGGTCATGAATCTACTCGAATCCGCCGGATTCTCACGTGCAA
ACCCCTACTACATTGTCAAACAAGGGAAAATCAATCAAATGGCAACGGCA
CCCGACTCGCAGCGTCTCAAGCTTCTTCGAGAAGTCGCTGGCACTCGTGT
CTACGATGAAAGACGAGAAGAGTCCAAAGGAATTCTCAAAGAAACTGAGG
CGAAGCGAGAAAAGATTGAAGAATTCCTCAAAACAATAGAAGATCGCCTC
TCGACTCTGGAAACAGAGAAAGAAGAGCTCAAAGAATATCAAAAACATGA
CAAGACACGACGAGCTCTCGAATATACTATCCATGATAGAGATCTCCAAG
AAACAAGAAGAAAGCTATCGGATATGGAAAACAAGAGGAAAAACTCAGGA
GAAGAAGCTGAAAAACTTCGAAGTGCTCTTCAAGAGGCTCAAGAGTCTGC
TAAATCCACGTCCAAGGATGTAAAAGAACTTAAACTTAAAGAGAATGCAG
CTAAAGAAGAGCGCGATGCTCTTAACGCAGAGAATCAGCAACACACGAAA
GAAAAGACGCGATTAGAATTTGTTATCAAGGATCTCAAAGATGAGGTGAC
TGGGGATAATAAATCAAAAGATCGGGCAGAGCAAGAATTATCCAAATTGA
GGGAAACGATTTCGAAAAAAGAAACAGAACTTGAGGGAATTCGACCCGTA
TATGATGAGATGAAAAAGAAGGAGGATGGTTGTACAAGAGAACTTTCTCT
CAAGGAACAAAAGCGGAAAGAGCTCTACGCCAAACAAGGACGTGGCTCTC
AATTCACCTCAAAAGATCAAAGAGACAACTGGATAAAAAAAGAACTCAAA
TCTCTCAATAAACAAATTAAGGATAAGGGGGAACAAATTGAGCGCCTTTC
AGAGGATCTCAAAAGGGATGCCAAAAAGAAAGTAGAGCTGGATAAAAGGA
TCGATGAATGTACTGGGGAACAGGATTCTCATAGGACCAACATTGATGAT
CATAATAAGGGATTCTATGAACTCAAAAAACGTAAGGATACGTTGCAAAG
TGAAAGAAATGATCTTTGTCGAAAGGAAATGAATCTACAACAATCCTTAT
CTGCACTTAAAGAAGAACTTTCTAAGGCCGATCAAACCTTGCGTTCTATG
GCAGGAAAGCCTATTCTCAACGGAAGGGATTCCGTAAGAAAAGTTCTTCA
GATTTTTAAGAATAAAGGAGGTCACTTTGAATCCATTGCTGACTCTTATC
ACGGACTTGTAATCGAAAATTTTGAATGTGAGCAAAGCATTTATACTGCG
GTAGAGGTGAGGTAGCTTGAAAAAATATATATATCATACGAATTTTTGAA
ATTATAAATTATGCATTAGGTTACTGCTGGTAATCGTCTCTTTCATCATA
TTGTTGACTCAGACAAGGTTGGAACACAAATTTTGAAAGAAATGAATAAA
CAAAAACTACCAGGTGAGGTCACGTTTATGCCTCTAAATCGTCTTCACGT
TCGCAGTATTGACTACCCTCAAACGAAGGTTGTATCTTGAGTTCATTGCA
TTTTCTTTTTTTCCTAATAACTAACTATTACTATCCTGTTATACTAATAG
GATGCAATTGCCATGGTTACCAAACTTGAGTACGAGGATCGTTATGATAA
AGCTCTTCGATACATTTTTGGAAGAACTCTAATTTGTAGAAATCTTGAGG
TTGCTACTCAATTAGCTCGCACCACAGGTTTAGATTGCGTTACATTAGAT
GGTGATCAAGTCAGTTCCAAAGGTTCTCTTACTGGTGGTTACTTTAATAA
GTCCAGATCTCGCTTGGAAATTCAAAAAACAAGATCTGAGAAAGGTGAAG
AGATTGCAAATCAAGAACAAGAAATGGTAAAACTCCGCCAGCAATTAAAT
GAGATAGAAGCAAATATAAATAAAATAGTTTCTGAAATGCAAAAAATGGA
AACAAAGAATTCAAAGGCAAAGGATGTCTTTGATAAAGTTAAAACAGATG
TTCGTCTCATGAAGGAAGAACTCAATGGGATTGAAAGAAATCTCCATCCT
AAAGATCGTTCCCTTACACAACTCAAATCCTCATTAGAAGCTATGCAAAC
AACCAAAGAAGGATTGGAGGCTGAGTTGAATCAAGAGTTACTGGCTAKTC
TTTCCTCTAAGGATCAAGGTGAAGTTGATCAGTTGAATGACGATATTCAC
CGTTTGAAGCAAGAAAATAAAAAAGCTTTCGCAGAAAGAATGAGACTTGA
GGCACAAAAAAACAAACTAGAGAATCTTTTAACAAATAATTTGAATCGTC
GTAAAGATGAGTTGGTTCAGGCCCTTCAAGAAATATCTGTTGAAGATCGA
AATCGCCAGTTAGAAAATTCCACCTCTGAGCTTGATTCCCTTGATGGTCG
TATTAAGTCCACTCAAGAGAATGTCAAAAGTATTGACAAAAAGTTGCAAG
ACATTCAAAAGAAACGTAAAAAAGGTCAGGCTGAACTCGAGTCTTATCGT
CTTCGTGAAAGAGAAATTGCGGAAAAGATAGAGGAGGATGCTAAGGAGCT
AGAAAAAATGGCCTCTAAACAGACGGTTTACCAAACAAAGATTCAGGAAT
GTACAAAGAAAATTCGAGAACTCGGATCACTTCCGACCGACGCTTTTGAC
AAATACAAAAATGTTTCACAAAAACAATTGTTTAAACATTTAGAACGCTC
TCAGACTGAATTGAAAAAATATTCCCATGTCAATAAGAAAGCTCTGGATC
AATTTATATCCTTTTCTGAACAAAAAGAAAAGTTAATGAAACGAAAAGAG
GAGTTGGATCGTGGAAATAAGAAAATTCAGGATCTCATGGATGTATTGGA
ACATCGAAAATATGAAGCAATTTTATTTACATTCAAACAGGTTTCAAAAT
ATTTCCAAGAAGTATTTAAGAAATTGGTTCCAACGGGTCAGGGAACATTG
AGTATTAAGCGTGAAAAAGACGATGAAGTTGGATCAGACGATCAAGCTCA
TCGATTAGAGAACGCTACAGGTGTTTCTTGCTCAGTGTCTTTCACAGGTC
GCAATGCTGAAATGAAGGAAATGGCTCAATTATCTGGTGGGCAAAAATCC
CTTGTGGCTCTGGCACTTATCTTTGCAATTCAAAAATGTGATCCCGCTCC
CTTTTATCTTTTTGACGAAATTGACGCAGCTTTGGATGCGATGCATCGGA
AGGCTGTTGCCGACATGATTCATGAACTGGCTGATGGTGCTCAATTTATC
ACAACTACTTTTAGACCTGAACTATTGCAGCATTCTAATAAGTTTTATGG
TGTCAAGTTTCGGAATAAAGTATCTCATGTAGAGTGTGTATCTCGAGAAG
ATGCCTATGATTTTGTTGAGGATGACGCCACACATGGATAATCCTGTTTA
AGATTATTAAGATATCAGAAATAATCAAATTTATCATAAAAGAATATTGT
TATTTTTTGTTTCAATCATGTGCTTGTAATAAACCGATTTAAAATTATTT
TTTATTTCCTTGTAACAACATTTCAGTTTTATATGACATAATAATAATAT
ATTCTATTAAAAAAGACACAAAAATTGCAATTATTAAGAGGATTCGTATT
CATTTCATATGTTGGTGCTCTATAGATTACTCTGCATAATTTTTTTTAAA
TAGATTGAGCGGAAAGATAGAACGAGCCCAGAAGGACGGGGGCATGGACT
GTTTTTATAACGCAGGTGTTAGCTGTTTTGATAATGAACAAGAAAGTATA
AACATTGGGAGGAGTGGAACAACATTCAAAAATATTTACATGATTTGAGA
GCTTTGATCAAGCCAGCGTCAATTAACATGGTAAATAAATGTGGAGTCCC
TAAATGCCGCTCGGGATATGATGGAAAGATTCCTCCAGGGGTTTCTATGC
ACTCATTCCCAACAAAGGACCTAGAAATTCGAAAACAATGGGTTACATCC
ATTGGAAAGCCGCCTTCTTGGGCTCCCTCTCCTAACAGTGTTATTTGTAG
TCTTCATTTTCACCCAACAGATTTTACGTTATTAAGTTCTGATTTAAACA
CCTCTCGTCGTCGAAAACACAAGGACGTACTTCTGAAAAGACGTCGACTC
CTCCCCAACGTCGTGCCTAGTGTATTTCAAGGTATTACCCTTCAATGTTG
TATTGATTATATTTGCTATTAATCTTGTAAATTTTCTCTTTTAGTTCTTG
GAGGCTCAGATATTAAATCCTACCAATCTCTTGAGGACATTCAAGATGAA
CTCAAAAAACTTGGACACTCCACCTTACCCAAAGATGTATTTGTCATTTC
TAAAGAAGGAGAGAGTCTGCATTTCTTGGGGCTCACCTTTGATAAATCAT
CAATTGCACCTAAAATAAATTATTCCTTGAATGTATTTTCGGATTTGACG
TACTCAATGATGGTTGGAGAACAAATGATACAAGAGAATTTATGTAAATC
TTCACGGAGTCACATTTCCTCATTTATGGCCCTAAATGATGCATTAAATC
TTTTAAAAAACAGTTTTCTTGAGTCCAAACCTCATAAAGGAACAAAAGAG
TTGGAAATGACTTTAATTAGAATTAAAAAAAGTGTTTCCCTTCTCCCTGA
ATCTGATAAACGTCGGAACAAGCTTTTATTTATCTTGGAACAATTGGACT
GTATATTACATTCTAGGGAAAAGTACTCCAAAAGTTTAATTATGCTCGGA
GTTCTCTGGAATAATGTTGCTCCTAGACTGTATCGATCTTTATCTAACTC
TTATGAAAGTGAAATGCTGCTCATGCTTCCTCCAATCCCAGTTATTAGAT
CACATACTGAATTACCGATACAAAAGTTAAAAGATAGATATTCTCGTTGC
TCCTCCGATGCTGAAAAAATGTTGAGTTTACTTATTACAGAAAATGTATC
CTCAAGCTACTCTGGAATCTTTAAAAGTGGGAAGTATTCTACACATGGGC
ATAGGAGAACTCTTTTAGATTTTTGTATCAAGGGAATCCACGAAGGGAAT
ACCAATGACAACAAAGAGCCAGACATTCATAGATTTGTTTCCCTTTCTGA
TTTAAACTGTATCATTATCAGAGATAAAGTGTTCGAATTAATTGAGACAT
GTACCAAAATCGGATTCAAAATTGTTTCCTTGGTATTGGATATTGGATCT
AATTTCCATGAATTTTACACTCGAGAACTTTTTGAAGAGAGTTCGAACGG
ATTTAGTGCAAAATCTATGATAATCAACGATGATCATGAGCGTTTCATTG
AGAATCCTTATGATGATACGCTTGGAAACAAAATATATGTCATATTTAAT
CCAAAGCATTGTGTTCAATCTCTATTAGATCACTGGATTGAGCAAAATAC
ATTTGAATGCCCCCCCTTTCAAGGTGTGGAAATGAGTAACCCAGAAATGA
TGAAAATTGAAGAATTATTTCAGCAAGACTCATCTCAAAACAAGTACAAT
TATAGAAGATCCGAGCTTAGGAATCCAAATAATATATTCAATGAGTTGAT
TTTATCTTCCCTAAAGAAAGGACCAACTTATGAGTTTGTCAAAGTTATTT
TAAAGTTTAGTAAAATTACCCAGGAACTTAAATTTACTACTCCAATTTGG
AATGCAGGGGACTCAAGAATACAATTTTTGAGAGAATTTTACGAATGGAT
AACGGCGTGGTGGATGTCAAATGGAGAATCTGGCACACCTTCAATCAAAA
TTATGAGGGAGCTGAGAGTAACTTCTTCGGGAATAGCGGATTTGATGTGC
TACTTATTTGAGAATAATGGAAATGTGATTGATATTTCTCCTGGTAGGTT
TAGCTGCCAAGTAGAAGAGATCGATTCCTGGAAGGTTTACCCCTTTAATC
ATAGATCATTGATCGGATTAGTGTCCATACTAACAAACAAAAAACGGATA
ATAAATATCAAAGGATTGATTTCATTGGTTGGTTCTGAAATGGAAAATCT
GGACATTATTTTCAACTACACGGATTCAAGGGAACAAAGGAACTATTCCT
GTAATGCCAATAACTATTTGATAGATGAAAAAGTCAGTTCTATTATTTAT
CCCTTGGAAGAAGAGGATTTATACTTTAAACCAACGCGAGAAAACGATCT
GGTATATATTTTAGCAGGGTTTATCGCGGAAAGTCTTTTACAAACTCTTG
ACTGTGATAGTCCTTGTCAAGGATGTTTTGAGCTTTTAGTCAATATCAAA
GATGCTCCAACTCTTATTTTTGAGGATTGTTCAGCACGAAAAGATGTGGA
GCTTGCATTTGCAAACACTGTTTCTGAAAAAGGAATGAGTGCTCCTTCCC
AATTAGTTTTTGCATGCTGTTTAATTATTCGAAAAATTTACATTGGACTC
AACATGTCGGAAAAAATTAGATCCTTACTTGATAATAATTCCCTTAAAAC
CTCGAGAGATATATTTTTTAGGATCATTGAGACTAAAATGAACATTTTTG
AGGAAACCGCCAGGATGATAAATGCCAGTTGTGATTCAACGGAGAAACAT
CCATTTAAGTCATATTTTAAGTCATTGTGTGATATGCTCTATGATGTCTT
TTCTTGTAATAGTTTTCGTAGGAAAAGGAAGATATTGAATTTAATGCCAG
TCTGTCCTCCCAAGGACATTAAATTCGAGGAAGAACAATCCTCTTCAAAT
AAAATGGACTCTTCTAAAATGAAGGAAGTTTCTGAGTGTAAGAGATCAAA
GGAAGCAGATATAGAGTCAGACCAGACTAAAATAGTTACCAAACTTAATA
ATGAAGTTTCTGCATTAGAATTTACAACTCATCACAATAATTCAGAAAAT
ATATTAATTGTTTCAGGTAGTGATAATATATAA
back to top
Add to Basket