EMLSAT00000002508, EMLSAT00000002508-698355 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002508
Unique NameEMLSAT00000002508-698355
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1494supercontigLSalAtl2s1494:63477..64419 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002508 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002508EMLSAG00000002508-685274Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011139EMLSAE00000011139-720067Lepeophtheirus salmonisexon
EMLSAE00000011140EMLSAE00000011140-720068Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771122auto771122Lepeophtheirus salmonispolypeptide
EMLSAP00000002508EMLSAP00000002508Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002508

>EMLSAP00000002508 ID=EMLSAP00000002508|Name=EMLSAP00000002508|organism=Lepeophtheirus salmonis|type=polypeptide|length=269bp
MDQLKVFRPSQRGLRKIIVATNIAETSITIEGIVYVIDSCFVKLKWYNPE
TNIDSLIVTEVSQASAEQXSGRAGRTRPGKCYRLCTESDFMKLRINTPPE
MQRTDLASTVLQLKALGIDNIVKFEFPSAPPSKNLISGLELLFALGAIDE
KGSLTSPLGERINANDWQIAKRNFEVSEGDLLTLLNVFNAFKKENESRGW
CQSHFLKYKVLRRASELYDRLIKTLKRYKIPIKSTTDTQTLLKCIVSGLF
PNAAYLHVSLDLIALYEEI
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mRNA from alignment at LSalAtl2s1494:63477..64419+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002508-698355 ID=EMLSAT00000002508-698355|Name=EMLSAT00000002508|organism=Lepeophtheirus salmonis|type=mRNA|length=943bp|location=Sequence derived from alignment at LSalAtl2s1494:63477..64419+ (Lepeophtheirus salmonis)
ATGGATCAATTGAAAGTATTTAGACCTAGTCAAAGGGGCCTTCGAAAAAT
AATTGTTGCAACAAACATTGCTGAAACCAGTATCACAATAGAAGGGATCG
TTTATGTTATCGATTCCTGTTTCGTTAAGCTAAAGTGGTATAATCCGGAA
ACTAACATTGATTCACTTATTGTTACTGAAGTCTCTCAAGCCTCTGCTGA
GCAGWGATCCGGGCGAGCGGGTAGAACAAGGCCAGGGAAATGTTATCGTC
TTTGTACAGAAAGTGACTTTATGAAACTTCGAATTAACACTCCCCCTGAA
ATGCAAAGAACGGACCTTGCATCTACTGTTCTTCAGTTAAAGGCTCTTGG
AATCGATAATATCGTTAAATTTGAATTTCCATCTGCTCCTCCATCTAAGA
ACTTGATATCCGGCTTAGAACTTTTATTTGCTCTTGGAGCAATCGATGAG
AAGGGATCTCTTACATCTCCCCTAGGCGAAAGAATGTCAGAATTTCCAAT
CCATCCTAATTTATCAAAAATGTTGCTTACCTCAGAGGATTTTGATTGCT
CTCAAGAAATATGTGCTANNNNNNGTTGCAATGCTTCAAGTAGAAGAAGT
ATTTATCAAGAAATCAAGCAATGCCAACGACTGGCAGATTGCTAAAAGGA
ACTTTGAGGTTTCTGAGGGAGATTTGCTCACCCTCCTTAACGTATTCAAC
GCATTTAAAAAGGAAAATGAATCCCGGGGATGGTGCCAAAGTCACTTTCT
AAAATACAAAGTTCTTAGACGAGCGAGTGAGCTCTACGATCGTCTCATCA
AAACACTTAAACGCTACAAGATCCCAATCAAGTCAACAACAGATACACAA
ACGCTATTAAAATGTATTGTCTCTGGATTGTTTCCAAACGCTGCATATCT
TCATGTATCTCTGGATCTTATCGCACTGTACGAGGAAATATAG
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