EMLSAT00000002549, EMLSAT00000002549-698396 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002549
Unique NameEMLSAT00000002549-698396
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1505supercontigLSalAtl2s1505:23971..25080 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002549 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002549EMLSAG00000002549-685315Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011305EMLSAE00000011305-720233Lepeophtheirus salmonisexon
EMLSAE00000011306EMLSAE00000011306-720234Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769616auto769616Lepeophtheirus salmonispolypeptide
EMLSAP00000002549EMLSAP00000002549Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002549

>EMLSAP00000002549 ID=EMLSAP00000002549|Name=EMLSAP00000002549|organism=Lepeophtheirus salmonis|type=polypeptide|length=241bp
MKSLQSISFIIVSALLSLSFADKSSRFGGSPPLGQYASSQSNYGNGLSGY
EQEVDPLAALADAIPGVPGEDYPIYSEVPETSFVCDGQIEGGYYADPEAQ
CQAFHICGADASGGLAKYSFLCPNGTLFNQEYFICDWWFNFDCAQAEELY
SRNEEIAAEREAAAGDLDAYGSAPXGYGAPSNGYGSPSSSKSGSAKYKKX
AAEQEAAAGDLDAYGSAPAGYGAPSNGYGSPSSSKSGAFIT
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mRNA from alignment at LSalAtl2s1505:23971..25080-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002549-698396 ID=EMLSAT00000002549-698396|Name=EMLSAT00000002549|organism=Lepeophtheirus salmonis|type=mRNA|length=1110bp|location=Sequence derived from alignment at LSalAtl2s1505:23971..25080- (Lepeophtheirus salmonis)
ATGAAATCTCTACAAAGTATATCCTTTATCATTGTCTCAGCACTCTTAAG
TCTCTCCTTCGCTGACAAATCTTCTAGATTTGGAGGATCCCCTCCTTTAG
GTCAATATGCTTCATCTCAGAGTAATTACGGCAATGGTTTGAGTGGATAT
GAGCAAGAAGTTGATCCTCTTGCGGCTCTTGCTGATGCCATTCCCGGAGT
TCCTGGAGAGGACTATCCCATTTACTCTGAAGTGCCAGAAACTTCTTTTG
TGTGTGATGGACAAATTGAAGGAGGATACTATGCAGATCCAGAGGCTCAA
TGTCAAGCCTTTCATATTTGCGGTGCTGATGCTTCTGGTGGTCTAGCCAA
GTATTCTTTCCTCTGTCCCAACGGAACTCTTTTCAATCAAGAGTATTTCA
TCTGTGACTGGTGGTTCAACTTTGACTGTGCTCAAGCTGAGGAGTTGTAC
TCTCGCAATGAAGAAATTGCAGCTGAGCGAGAAGCTGCAGCTGGAGATTT
GGATGCCTATGGTTCAGCTCCTGRTGGATATGGTGCTCCTTCTAATGGTT
ATGGTTCWCCATCCAGTTCTAAGTCTGGTTCTGCAAAATATAAGAAGNTT
GCAGCTGAGCAAGAAGCTGCAGCTGGAGATTTGGATGCCTATGGTTCAGC
TCCTGCTGGATATGGGGCTCCTTCTAATGGTTATGGTTCACCATCCAGTT
CTAAGTCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGT
CCCTCTCCTAAGAGAAAATCATCGAATAAACCCTCATCTGGATATGGAAG
TCCTTCATCTCCTGCCCCTGGTGGGTATGGATCCCCCGTTGCTCCACAGT
CTTCCTATCAATTTTAAAATGCTAGAGGATGTTATATATTTATWAACTTA
TTCATATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGAAACTATTTGGATGTACAATATTTATAATATGTAGGTGCATT
TATTACTTAA
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