EMLSAT00000002557, EMLSAT00000002557-698404 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002557
Unique NameEMLSAT00000002557-698404
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1510supercontigLSalAtl2s1510:50770..51213 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002557 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002557EMLSAG00000002557-685323Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011325EMLSAE00000011325-720253Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770683auto770683Lepeophtheirus salmonispolypeptide
EMLSAP00000002557EMLSAP00000002557Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002557

>EMLSAP00000002557 ID=EMLSAP00000002557|Name=EMLSAP00000002557|organism=Lepeophtheirus salmonis|type=polypeptide|length=147bp
MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMS
AEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR
FGGGGGNRYNDNNDRRSYGSGGGGGGYSRXGGDRGDRGDRGGDWGGY
back to top

mRNA from alignment at LSalAtl2s1510:50770..51213+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002557-698404 ID=EMLSAT00000002557-698404|Name=EMLSAT00000002557|organism=Lepeophtheirus salmonis|type=mRNA|length=444bp|location=Sequence derived from alignment at LSalAtl2s1510:50770..51213+ (Lepeophtheirus salmonis)
ATGCCGTCTCAGGAAGGAACCAAATTATTTGTCCATGGTGTTCGAGACAC
TTGTCCCCGCAGTGTTCTAGAAGATGAATTCGGTAAAATCGGTCCCGTGG
CGGATGTACATATTACCGAGAAGGGCTYCGCCTTTGTTACGATGATGAGC
GCCGAGGACGCTGAGGGTGCCATGCGCAAGTTAAATGGTACAACGGTCCA
TGGTCAGGAAGTTAAGGTGGAGATTGCCCATGAAGGAGGTCGTCGTGGAT
CCCGGGGTGGAGGCTACAGAGGCCGATTTGGCGGCAATGATCGGGGACGA
TTCGGAGGMGGCGGTGGAAACCGGTACAATGACAATAATGATCGCCGCAG
CTATGGAAGTGGCGGMGGAGGAGGAGGATACTCCAGGMCTGGMGGAGACC
GGGGAGATCGTGGAGACCGTGGAGGTGATTGGGGAGGATATTAA
back to top
Add to Basket