EMLSAT00000002577, EMLSAT00000002577-698424 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002577
Unique NameEMLSAT00000002577-698424
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s151supercontigLSalAtl2s151:1242880..1243587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002577 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002577EMLSAG00000002577-685343Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011394EMLSAE00000011394-720322Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780556auto780556Lepeophtheirus salmonispolypeptide
EMLSAP00000002577EMLSAP00000002577Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002577

>EMLSAP00000002577 ID=EMLSAP00000002577|Name=EMLSAP00000002577|organism=Lepeophtheirus salmonis|type=polypeptide|length=235bp
MSGGVDQRRIELRDINEMITCKICQGYLIDATTVTECLHTFCKSCIVKHL
EDSNTCPECEDTIHQSHPLDYIAFDRTMQDLVYKIVPNLEKDEYDRERNF
YGERGLPCPKDQQQDDKKEDEESSQDTAGEDDKNQDYHRFDEQVSLLLEC
VTPHFRPLKKKYVRCSSLATVTHLKKFVATKLLQSVDKYKDLDITCDDEP
LYKDHTLKFVYVTRWRTKEPPMRLLFAPKKEVKEI
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mRNA from alignment at LSalAtl2s151:1242880..1243587+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002577-698424 ID=EMLSAT00000002577-698424|Name=EMLSAT00000002577|organism=Lepeophtheirus salmonis|type=mRNA|length=708bp|location=Sequence derived from alignment at LSalAtl2s151:1242880..1243587+ (Lepeophtheirus salmonis)
ATGTCGGGAGGTGTGGACCAACGCCGGATTGAACTCCGTGACATCAATGA
AATGATCACCTGCAAAATCTGTCAAGGCTACCTGATCGACGCAACGACCG
TGACTGAATGTCTTCACACGTTCTGCAAATCCTGCATTGTGAAGCATTTG
GAGGACTCCAACACTTGCCCAGAGTGTGAAGACACAATCCATCAATCCCA
TCCCTTGGACTACATCGCCTTTGATCGCACAATGCAAGACCTCGTCTATA
AAATAGTTCCGAACCTGGAGAAAGACGAATATGATCGAGAGCGGAACTTT
TATGGGGAGCGAGGTCTTCCCTGTCCCAAGGATCAGCAACAGGACGATAA
AAAGGAGGATGAAGAATCCTCCCAAGATACAGCAGGAGAAGACGATAAAA
ATCAGGACTATCACAGATTTGACGAGCAAGTCTCTCTTTTACTCGAGTGC
GTCACTCCACACTTTCGGCCTCTTAAGAAGAAATACGTGCGATGTTCGAG
TTTAGCTACTGTGACACACCTCAAGAAATTTGTCGCCACGAAGCTCCTGC
AGTCTGTTGATAAGTACAAAGACTTGGATATCACTTGTGATGATGAACCT
CTGTATAAGGATCACACGCTTAAATTTGTGTACGTGACGCGATGGAGAAC
TAAGGAGCCCCCTATGAGACTTTTATTTGCACCCAAGAAGGAAGTGAAAG
AAATTTAG
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