EMLSAT00000002578, EMLSAT00000002578-698425 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002578
Unique NameEMLSAT00000002578-698425
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s151supercontigLSalAtl2s151:1244006..1245441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002578 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002578EMLSAG00000002578-685344Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011395EMLSAE00000011395-720323Lepeophtheirus salmonisexon
EMLSAE00000011396EMLSAE00000011396-720324Lepeophtheirus salmonisexon
EMLSAE00000011397EMLSAE00000011397-720325Lepeophtheirus salmonisexon
EMLSAE00000011398EMLSAE00000011398-720326Lepeophtheirus salmonisexon
EMLSAE00000011399EMLSAE00000011399-720327Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780557auto780557Lepeophtheirus salmonispolypeptide
EMLSAP00000002578EMLSAP00000002578Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002578

>EMLSAP00000002578 ID=EMLSAP00000002578|Name=EMLSAP00000002578|organism=Lepeophtheirus salmonis|type=polypeptide|length=366bp
MNTTTAGYTPPRRRIKVSHKLRCSLGKAFTIPHDESMESLLSRLQKDIFS
ELPPILRLRTEDLAEVIDIAFIRDGDQLVIECEGDRLYEEWITLNVGGTL
MTTTRSSLTKTSPESVLARMFAEQNNSLAPSLRDKNNAYLLDRTPRYFEA
LLHYLRSGSLVLDPGVNPLGVYEEAKYFGVKEIISELESRVEESLCRDTA
PLSRREVIDAIISTSNIEKLRFQGVNISGADLSKLDLSNINFKHANLSNC
QMTGTNLSRCNLERANLSNATMDNAQLVAVKMACADLEGASIRGGKFEDP
EGTAANMEGANLKNTDFENSNMAGINLRLCDLSGSDLHNANLRGANLKDA
SLKLMLTPLHMSQTVR
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mRNA from alignment at LSalAtl2s151:1244006..1245441-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002578-698425 ID=EMLSAT00000002578-698425|Name=EMLSAT00000002578|organism=Lepeophtheirus salmonis|type=mRNA|length=1436bp|location=Sequence derived from alignment at LSalAtl2s151:1244006..1245441- (Lepeophtheirus salmonis)
ATGAACACTACTACCGCTGGTTATACTCCTCCTAGACGCCGAATCAAAGT GTCTCATAAACTGCGATGTTCTCTGGGTAAAGCATTTACAATTCCTCATG ATGAGTCAATGGAAAGTCTTTTGTCTCGACTACAAAAGGACATTTTTTCG GAGCTCCCTCCCATTCTTCGTCTCCGAACTGAGGATCTAGCTGAAGTTAT AGACATTGCCTTCATACGAGATGGTGATCAATTGGTCATTGAGTGTGAGG GGGATCGACTATATGAAGAATGGATCACTCTAAATGTGGGAGGAACTCTC ATGACCACAACTCGGAGCTCTTTGACAAAAACATCTCCTGAGAGTGTCTT GGCTCGAATGTTTGCTGAGCAAAATAATTCATTAGGTTTCTTCTTCTATT ATTATAAATTATAATTAAGATAAATAGGATGTTAATTATAACGCGAACTT TCATTATTTTAAGCTCCGAGTCTTAGGGATAAGAACAATGCGTATCTTTT GGACAGAACTCCTCGTTACTTTGAAGCTCTTCTTCACTATCTACGATCGG GATCCCTAGTTCTTGATCCTGGAGTTAACCCTTTGGGTGTGTATGAGGAG GCTAAATATTTTGGTGTCAAGGAGATCATATCTGAGTTAGAGAGTCGAGT CGAGGAGAGTTTATGTAGGGATACTGCTCCTCTGTCGAGGAGAGAAGTCA TAGATGCTATTATTTCTACAAGTAACATTGAAAAATTAAGATTCCAAGGA GTGAATATCTCCGGTGCCGATCTGTCAAAGCTTGATCTCAGCAATATTAA CTTTAAGTAAGGGATCCTAGAGATATTAATCTAATGAATGCACTTATCAA CCTTGAAAACTTGATTTATCTTCTTTCCTTCTTAAGACACGCCAACTTAT CAAACTGTCAAATGACGGGTACGAATCTATCTCGTTGCAATCTAGAAAGA GCAAACTTGTCAAATGCCACAATGGATAATGCTCAACTTGTAGCTGTAAA AATGGCATGTGCGGATCTGGAGGGAGCTAGCATTAGAGGAGGAAAATTTG AGGATCCTGAAGGGACAGCGGCAAATATGGAAGGTTTGTTGAGTTCGAAG CCTTTTTATTTGATTCATTGTTGATTTCCAGGTGCTAATCTTAAAAACAC GGACTTTGAAAACAGTAACATGGCTGGAATTAATCTTCGCGTGGCTACGC TCAAAAATGCCAATTTAAAGAACTGCGATCTTCGTGGAGCTACATTGGCA GGCGCCAATCTGGAGGKAAGGCAATAAATCTCTTAAACTTTAAAGTAAAA TCCATCAACCTTCTTTCAGTTATGTGACTTATCCGGAAGTGATCTTCACA ATGCAAATCTACGCGGAGCCAATTTAAAAGACGCTTCTCTTAAGCTAATG TTGACTCCTCTTCACATGTCACAGACAGTTAGATGA
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