EMLSAT00000002579, EMLSAT00000002579-698426 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002579
Unique Name	EMLSAT00000002579-698426
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s151	supercontig	LSalAtl2s151:1296698..1300995 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002579 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002579	EMLSAG00000002579-685345	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000011400	EMLSAE00000011400-720328	Lepeophtheirus salmonis	exon
EMLSAE00000011401	EMLSAE00000011401-720329	Lepeophtheirus salmonis	exon
EMLSAE00000011402	EMLSAE00000011402-720330	Lepeophtheirus salmonis	exon
EMLSAE00000011403	EMLSAE00000011403-720331	Lepeophtheirus salmonis	exon
EMLSAE00000011404	EMLSAE00000011404-720332	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780605	auto780605	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002579	EMLSAP00000002579	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s151:1296698..1300995+

protein sequence of EMLSAP00000002579

>EMLSAP00000002579 ID=EMLSAP00000002579|Name=EMLSAP00000002579|organism=Lepeophtheirus salmonis|type=polypeptide|length=438bp
MISKLEKSRWSCYHLLHKYVLIQIRMVSNRTNSDDWIYALHSVDTFNKLL
QPESSHILHYHLHEDKHSFENCRPTIIRPVTVSKILQIVASERTWKGAKE
ISRSITIGLDPSKVNHVSEEYDWLQVPIRVLQNETHYEPKQRIRKNMMED
DVGSPTSDYFSQNGGRIKNPGIKDGLNHXAYLDNYIATEEIFLNNLFSHL
CKVPGLLNEGVIKSTKSGSTICKYVRVHMAEYYHDILWPEIGRMASSCLL
WDNLPESNDIPFAFQHPRVCLSIGHMLQEYLSSPIDDDYSPLAFPCVQIL
VENFNLHAISFFWDLQYMVSVSEASKPKTEIIPYAEGVCGTTITKTGRYL
HDTIKILSSCNNRCNPDVLRNFVEHGTHDPEDISFLEELHVLRRLQATLF
CIRNWACQKGEAALRAWQFKDFLMTTQNDILNAQAACQ

mRNA from alignment at LSalAtl2s151:1296698..1300995+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002579-698426 ID=EMLSAT00000002579-698426|Name=EMLSAT00000002579|organism=Lepeophtheirus salmonis|type=mRNA|length=4298bp|location=Sequence derived from alignment at LSalAtl2s151:1296698..1300995+ (Lepeophtheirus salmonis)
GAAAAATCTATTCGCAAGACGGTTTTCTTTCGTGCCAAGCACATGATCTC
CAAATTAGAAAAGAGTCGATGGTCATGCTACCATTTGCTCCACAAATATG
TCCTCATACAAATCCGAATGGTTTCTAATCGAACAAACTCAGATGATTGG
ATCTACGCTCTACACTCCGTCGACACTTTTAACAAACTTCTACAGCCCGA
GTCCTCCCATATTCTCCATTATCATCTCCATGAAGATAAGCATAGCTTTG
AAAATTGTAGACCCACCATCATTCGTCCTGTTACTGTAAGCAAAATCCTA
CAAATCGTAGCCTCAGAGCGAACGTGGAAAGGTGCAAAGGAAATCAGTAG
GAGTATCACAATTGGGCTGGATCCCAGTAAAGTCAACCATGTGTCTGAGG
AGTATGACTGGCTTCAAGTTCCAATACGGGTTCTACAAAATGAAACGCAC
TATGAGGTAAGTTTTGGACCATAACTTTTGGGGACTCCCATTTATAATAA
TTTATATTGCAATTTAACGTAATTACACATAAGTTCGCTATAGCCCCCTG
CGTACGCCCCTGATACAATATATAATGTGTACATAAATAATGGTAGCCTG
GCAGGGAGCCCTGGTTCCCTTCTCTTTGTTTCAAGGAGCGACAATTTGAG
AAATTTCTACGCTTAAAAATTTTTTTGAAAAAAAAAACAAGACTTTTATT
TGGGCCATTCCTTACCAAATCCCCATAGGCATACAAGGGTAATTATTCAA
CCAACAAATACATCAAAATTGTATTAAACTTTGTAAACATGTAGATTTTT
ACCAAGAAACTCTAAATCTAATTAATATTGTATCGAACTTTTTGTATATA
ATATCCCTTTTTATGACCAGGAATTTTTATGATGACCTCGAATTTGACCT
TGTAGATCAAACTAATTACAGTCTATTACATAGTCTATTGCATATTCATA
TAATTCATAACTGTAGCCTAGTTCCATTATATTTCAACAAATTTGCAAAC
AATAATTGTGGTCCTACCATGGTGAAAATTTATTTTAACTACGTTGTTGC
ATAGAGTATCATTAAATATGACCACTTAAAAAATAATTTTAAAGTCGGTG
AACTGGTAATCAAGCTATGGCCATTTTTAACATCTTAACCAATAGATGGC
GCTCACACAGTGAAAATGTGTATCCCTGATTTTAGAGGTCATACTTTTAA
TAGAAGTATGATTTTGGTATCAAATTGTACGTTTTTTGGGATGAGGAGCA
TGAATTTGAGGCTTTAATCAGTGTACAACCAAGAGAAATCAATGATTTTC
AATGTTTCGTGAGGCCAACTTGAGGATGAAGGATTGCACAAAATTTTGAA
AAAAATATATTTTTGATATCTTGAAGAGTTTTATACTCTACTCATCTTAG
TTACTTCCTTCAACTTACTTTCCATTCAACCATTCAAATTTAATGTTAAT
TTAACCTAAAAACATTGAAGGTTGGTTGGTTGGTTGAAGGCATTTATTTT
TTTGCCCAAGTTAGGATATAAATAATTAAAAACCAATATAATTGAATTTT
CGTGTGAGCCCCTTCTCCCAGTTCCTACAGCCCTGCACAACGAAGTTTAA
GCCCGTATGACACAATATGTGTACAAAATATCAGTTCCTGGGACTAATTA
TCTCTCTTTCTCTAGCCAAAACAAAGGATTCGTAAGAACATGATGGAAGA
TGATGTTGGATCCCCTACCTCGGACTACTTTAGTCAAAATGGCGGAAGGA
TTAAAAATCCGGGTATTAAGGACGGCCTTAATCATKAAGCCTATCTCGAT
AATTACATTGCAACTGAAGAAATATTCCTTAATAATTTATTTTCACATCT
TTGCAAGGTATATCCATTTCATATTATGCATGGATCCTCTCTGAAAATCC
TTTCACACTCATAGGTACCGGGTCTTTTGAATGAAGGAGTAATAAAATCC
ACAAAATCCGGGTCAACCATTTGTAAATATGTCCGTGTTCACATGGCAGA
GTATTATCATGACATTCTCTGGCCAGAAATTGGGCGAATGGCCTCGAGTT
GCTTGCTTTGGGATAACCTGCCTGAATCCAATGACATACCTTTTGCCTTT
CAACACCCTCGTGTTTGTCTTAGTATTGGGCATATGCTTCAAGAATATTT
ATCTTCTCCCATTGATGGTAGGAATTGATTACTCCAGTTTATATTAGCCA
GGGTTCTTTAATTAATTACTTAATTAACAATATTTTTATTTTATAGATGA
TTATTCACCATTAGCCTTTCCTTGTGTTCAAATCCTTGTAGAAAATTTTA
ATCTTCACGCTATTTCATTCTTTTGGGATCTTCAATATATGGTGAGTGTC
TCAGAAGCCTCAAAACCAAAAACAGAAATAATTCCCTATGCCGAAGGGGT
TTGTGGCACAACTATCACTAAAACAGGTCGATATCTTCATGATACTATAA
AGGTAATATATAATAGAGACAAATATATCTACTAGGGGTTCGCTTATGGC
AAGGTTAATAGAAATACAAGGTTAGACCATCATGTAATCGAGCTTGCTAG
AATGTTCTATCTGATGTATTGTACCAATTACTGGGCAAGACAGGCAAATT
TTGACAAAACACGCAAACCACTTATAGTGTATGACGTCACTATTGCTAGA
ATGTTCAATTTAATGTATCGTACCGACTGCTGGGCCAAAAACAGGTTTTG
ACAAAACACTCAACCACTCATAGTCTATAACGTCACTATTAAAAAGCGTG
GTGGAAGTCAAACATCAGTCGTACACGCATTATGGTATAACCTTGTATTT
CTATTAACCTTATCTTATGGGATATGGAGATCCCTTTTTCACGAGATTTG
TTAGGGATTTACACCTAAGGGCTTTGCACAAAGTATATCTGTCTGTTTAT
TTATCAATATACATCAACAAAATGATGCCGAAGCTCAAAATAACTATCAC
AAATCCACAAATGAATATTTAATTAGACATATATGTAGAATCAAACCTGT
ATTAAGAGGCCAGGTAAGGGAAATGGAAAAATTCACGGCTTAGTGCAGGT
GACCTATTAAACCAAGTTGTGTATTTTGTAACAATTCCACGTCACTTAAA
ACTAATGACCTTTAAACCAAGTTTGACTGTAACTTCACCTTCTAACACCT
CCAAGTAACATGAATATAATTTTGAATCTCTCACAAATTTGTGATTAAAA
ATTTATTTTTAAAATATAAAAATAAGCTACTTAAATGACTCAATTTTTAT
CATTTAAATAGCATCGGCTAAAAGACAAATTTTACTTTAATGATATAAAA
AATAACTCTCCAGTATTGCTACACTTTTCTTAGCAAATTTACACGTAACT
ACTCAATACTTATACTATTTATATGTGTTCTCGTCTCAAAAATGAAAAAA
ATGTTAATAAGAGTTTGAGAAAAAAACTAATATGTTGGGATGACGGATGA
GTAATTTAGTCTCTAGAGCACTAACTATCAAAGACAAAGAAAATTCATGT
CGATATACCAGTCTTTATATTTCATTCAAATTTTAAGATATACTGAAAAT
GAATTATGATCATAGATGGGTTTTTTGTAAGAGCCCGAGAAGAAGGCGGT
AGGAAGACATATGGTACACCTGAATTAAGACTCTTCTTAATATCAGCTGC
CTGTTTTATGATTTTGGAGGGGGAAAATGAATTAATGGTAGAGTACATAT
GAGATAAATAGCAAAAACAAACAGAAACATTTCTTTTTCATTACATGCAC
ACGCCTGCAATATTTCATTAATACGAATACATTGTTATTTCTTATATCAA
AATATATATTTATGATATACATAAGGGAGCACTATACACTGTGCATCCTT
TGACAGTTGTTCATACAAACAGGTATGGCATGCTTTATTAATATAGGAAT
ATCATCCTGAAATTTTCGGGAATCAATTTAAACAAATGTTTCTCGGGATT
TCGATTAAGAACAATTTCACAGTGAATGAGAAATCCTAGTCCGTTCATTT
ATATATAATATGTCTAGTATACTTTCATCAATCCATTGATTTTTTTCAGA
TATTATCTAGCTGTAACAATCGATGCAATCCTGATGTNCTTCGCAACTTT
GTAGAGCATGGTACCCATGATCCTGAGGACATATCCTTTCTGGAAGAGCT
CCATGTTTTACGAAGGCTTCAAGCAACATTGTTTTGTATCCGTAATTGGG
CGTGCCAAAAAGGAGAGGCTGCTCTCCGAGCTTGGCAATTTAAAGACTTT
CTTATGACTACTCAAAATGACATTCTTAATGCTCAAGCTGCGTGTCAA

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