EMLSAT00000002581, EMLSAT00000002581-698428 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002581
Unique NameEMLSAT00000002581-698428
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s151supercontigLSalAtl2s151:1305107..1306803 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002581 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002581EMLSAG00000002581-685347Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011407EMLSAE00000011407-720335Lepeophtheirus salmonisexon
EMLSAE00000011408EMLSAE00000011408-720336Lepeophtheirus salmonisexon
EMLSAE00000011409EMLSAE00000011409-720337Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780615auto780615Lepeophtheirus salmonispolypeptide
EMLSAP00000002581EMLSAP00000002581Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002581

>EMLSAP00000002581 ID=EMLSAP00000002581|Name=EMLSAP00000002581|organism=Lepeophtheirus salmonis|type=polypeptide|length=508bp
MIGLIRSTRITCRYFTERKFRSLCTIVPPSFEHDGDGRGPPEVTPPHAPS
QIRTPEEICSFREKNRIVVKGVDTDPVFSFQETGFPLGLIERIKSHGFEA
PTAIQAQGWPIATNGKNIIAIGETGSGKTLGFVLPGLCHLMRXPPRRNRG
DGPVVLIIAPTRELAEQIHNVVDGFASKIPTACLVGGNHKQGQIRDLNRG
AEIVVATPGRLIDLMEDGDVDLKRCSYMVLDEADRMLDMGFEPQIRKIMR
QVRPDRQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQ
DFKFCERFEKMDSIKEILESLSEVESKKVLIFAATKIRVDQLVRKLKYWN
FVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVIN
YDFPNNIEDYVHRIGRTGRCSKEGKSFSFFDEVEDGSKAKDLINVLKEAH
QSIPHKLQEISRMSYKPKKKQFKSNFNRRNSYDDDFYNGTWRKRRENNRN
RRYSEDFQ
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mRNA from alignment at LSalAtl2s151:1305107..1306803-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002581-698428 ID=EMLSAT00000002581-698428|Name=EMLSAT00000002581|organism=Lepeophtheirus salmonis|type=mRNA|length=1697bp|location=Sequence derived from alignment at LSalAtl2s151:1305107..1306803- (Lepeophtheirus salmonis)
TCCTCACATTGCCGCGGAAATAACGGAATAAAGATGATTGGGTTGATTCG GTCAACGAGAATCACGTGTAGATATTTCACGGAAAGGAAATTTCGAAGCC TATGTACAATTGTACCCCCGTCATTTGAACATGATGGTGATGGCAGAGGG CCTCCTGAAGTGACACCCCCTCATGCTCCGTCTCAAATTAGAACTCCTGA AGAAATTTGTTCATTTCGAGAGAAAAATCGTATTGTGGTCAAAGGTGTGG ATACAGATCCAGTCTTTAGCTTCCAAGAAACTGGATTTCCTCTTGGGCTC ATAGAGAGAATTGTAAGAAGGATTGGATCCATTCATTTATTATTAATCAT CAGTATCGAATAATTATTCTTTATAACATTTATAGAAGTCGCATGGATTT GAGGCACCAACGGCCATTCAAGCACAAGGTTGGCCCATTGCTACAAATGG GAAAAATATAATCGCCATAGGTGAAACGGGCTCTGGAAAAACACTTGGAT TTGTATTGCCAGGTCTATGTCATTTGATGCGACAKCCTCCGAGACGTAAT AGAGGAGATGGGCCTGTCGTTCTTATTATTGCTCCTACTCGTGAGCTAGC GGAACAGGTAGGTTTGGTTTATCCCTGTCTCGAACATAGTTAACATTATT TTTTTAATTAAAACCTGATAGATCCATAATGTGGTAGATGGTTTTGCATC CAAAATTCCTACTGCTTGTTTAGTTGGAGGGAATCATAAACAAGGTCAAA TCAGGGATCTAAACAGAGGAGCGGAAATAGTCGTGGCAACTCCTGGACGG CTTATAGATTTGATGGAAGATGGGGATGTGGATTTAAAACGATGTTCTTA TATGGTACTAGATGAAGCGGATAGAATGTTAGATATGGGGTTTGAGCCTC AAATACGGAAAATCATGCGTCAAGTAAGGCCAGATCGACAATTACTCATG TGGTCAGCCACTTGGCCTTCGGAAGTGCAATCTCTAGCTCACGACTTTTT TGGAGGTACAGACTATGCTCATGTCAATATTGGTTCCTCAGAGCTAKAAG CCAATAAATTGATTATGCAGGATTTTAAATTTTGTGAACGTTTTGAAAAG ATGGATTCAATTAAGGAAATACTTGAAAGCTTGAGCGAAGTAGAAAGCAA GAAAGTTCTAATTTTTGCCGCGACCAAAATAAGGGTTGATCAATTGGTAA GAAAATTGAAATATTGGAATTTTGTTGTGGATGGAATTCATGGAGATAAG ACTCAAGCCATGAGGACTCGAGCTTTGGATAAATTTCGTTCAGGAAGGAT AAACATACTCGTAGCCACGGATGTTGCATCTCGTGGATTAGACGTAAATG ATATCAAAGTCGTTATAAATTATGACTTTCCAAATAACATTGAAGACTAT GTTCATCGTATTGGGCGTACAGGTCGTTGTAGCAAGGAGGGTAAATCTTT TTCATTCTTTGATGAAGTCGAGGATGGAAGTAAGGCAAAGGATTTGATCA ATGTTTTAAAAGAGGCTCATCAGTCTATTCCTCATAAGCTTCAAGAAATT AGCCGTATGAGTTATAAACCTAAGAAAAAACAGTTTAAATCCAATTTTAA TAGAAGAAACTCATATGATGATGACTTTTATAATGGTACATGGAGGAAGC GGAGGGAAAATAACAGAAACCGTCGATATTCGGAGGATTTTCAATAA
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