EMLSAT00000002602, EMLSAT00000002602-698449 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002602
Unique NameEMLSAT00000002602-698449
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AO F358 EMLSAT00000002602 female
  1. PreAdult2
 -Missing-
-Missing- 		16.01.2018 - 09:08
20.02.2018 - 09:08
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s151supercontigLSalAtl2s151:51919..52854 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002602 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002602EMLSAG00000002602-685368Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011521EMLSAE00000011521-720449Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770745auto770745Lepeophtheirus salmonispolypeptide
EMLSAP00000002602EMLSAP00000002602Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002602

>EMLSAP00000002602 ID=EMLSAP00000002602|Name=EMLSAP00000002602|organism=Lepeophtheirus salmonis|type=polypeptide|length=311bp
MDDVWEEKCKTLYNEKCDTKYEKRCASVKDIECSTVTQEECSIVFEDKCK
TFNVPYCDVKMVDSCSTEEECNPSTQRECVKIPKKTCSQVPDEEIIVDQV
PLSPVIIETEVIIPEVPTFEDGEEVEYTDEYVTPKPHTEHDIINDDSVAD
TRLQKRSAKAIAKVIKKKFGSKHSIIEKKKALKGYEIGSKHYKKSKDYDS
DSLLSIPTLKLKTVCRESEEESCYDRTRQVCNNVQKCTKLPKKSCGFNAT
KKCAKLPTQKCSDIPKEVCKDVPRSVCRDVPREVCLPYPEKSCKKIIVKR
PREECRPVEGY
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mRNA from alignment at LSalAtl2s151:51919..52854-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002602-698449 ID=EMLSAT00000002602-698449|Name=EMLSAT00000002602|organism=Lepeophtheirus salmonis|type=mRNA|length=936bp|location=Sequence derived from alignment at LSalAtl2s151:51919..52854- (Lepeophtheirus salmonis)
ATGGACGACGTCTGGGAAGAGAAATGTAAGACCTTGTATAACGAGAAGTG
CGACACCAAGTATGAGAAGAGATGCGCAAGTGTGAAAGACATTGAGTGTT
CGACCGTAACTCAAGAAGAGTGTAGTATTGTATTTGAGGATAAGTGCAAG
ACTTTCAACGTGCCTTATTGCGACGTTAAAATGGTCGATTCTTGTTCAAC
TGAAGAGGAATGCAATCCTTCGACTCAACGAGAATGCGTTAAAATTCCCA
AGAAGACCTGTTCTCAAGTCCCTGATGAAGAAATAATAGTCGATCAAGTT
CCACTATCTCCTGTAATTATTGAAACTGAAGTTATTATTCCGGAGGTTCC
AACGTTTGAAGACGGAGAAGAGGTAGAATATACTGATGAGTATGTTACTC
CTAAGCCTCACACGGAGCACGATATAATTAACGATGACTCTGTTGCCGAT
ACTAGATTACAAAAACGCTCTGCCAAAGCTATTGCGAAAGTGATTAAAAA
AAAGTTTGGTTCTAAACATTCAATCATCGAAAAGAAGAAGGCTCTCAAAG
GCTACGAAATTGGAAGTAAACACTACAAGAAGTCAAAAGACTACGACAGT
GATTCATTATTATCTATTCCAACTCTCAAACTAAAGACCGTCTGCAGAGA
ATCCGAAGAGGAAAGCTGTTATGACCGTACCCGTCAAGTTTGTAATAATG
TTCAGAAATGTACGAAGCTTCCTAAGAAGTCTTGCGGTTTCAACGCTACT
AAAAAGTGTGCGAAGTTACCTACTCAGAAGTGTTCCGATATTCCAAAGGA
AGTGTGTAAAGACGTTCCTAGATCAGTCTGCCGGGATGTTCCAAGGGAGG
TATGTTTGCCTTATCCTGAGAAGTCCTGTAAGAAGATAATTGTTAAACGA
CCTAGAGAAGAGTGTAGACCCGTAGAAGGCTACTAG
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