EMLSAT00000002649, EMLSAT00000002649-698496 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002649
Unique NameEMLSAT00000002649-698496
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1537supercontigLSalAtl2s1537:133243..134074 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002649 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002649EMLSAG00000002649-685415Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011730EMLSAE00000011730-720658Lepeophtheirus salmonisexon
EMLSAE00000011731EMLSAE00000011731-720659Lepeophtheirus salmonisexon
EMLSAE00000011732EMLSAE00000011732-720660Lepeophtheirus salmonisexon
EMLSAE00000011733EMLSAE00000011733-720661Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772965auto772965Lepeophtheirus salmonispolypeptide
EMLSAP00000002649EMLSAP00000002649Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002649

>EMLSAP00000002649 ID=EMLSAP00000002649|Name=EMLSAP00000002649|organism=Lepeophtheirus salmonis|type=polypeptide|length=182bp
MEPIYARTVFPCFDEPSFKSIFNIALRRPKNMTSISNMPISETITEENSS
DFVLDFFMPTPLMSTYLVAFVIANYTNERIPTNDSVKLRIWSSEEDKLKT
CWAKRVSPTLYENLVKYFGTNLPIPQEDFITVPAIKRAVAMENLGLTTFL
SKFMLTEENGKSILSLNSKDEIVVTIAHEVIL
back to top

mRNA from alignment at LSalAtl2s1537:133243..134074+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002649-698496 ID=EMLSAT00000002649-698496|Name=EMLSAT00000002649|organism=Lepeophtheirus salmonis|type=mRNA|length=832bp|location=Sequence derived from alignment at LSalAtl2s1537:133243..134074+ (Lepeophtheirus salmonis)
ATGGAGCCAATATACGCTCGAACTGTCTTTCCTTGCTTTGATGAGCCAAG
CTTTAAGTCCATATTCAATATAGCACTTCGTCGTCCCAAAAATATGACCT
CCATTTCAAATATGCCAATTAGTGAAACAATTACAGAAGAGTAYAGTTTT
TATAGCTTTAATCTATATACACACATATACTAAATCATAATTATTCTTTC
AATTAGAAATTCTTCAGATTTTGTCTTAGATTTTTTTATGCCCACTCCAT
TAATGAGCACATATCTGGTGGCATTTGTCATTGCCAATTACACCAATGAA
AGAATTCCTACAAATGATTCTGTAAAATTAAGAATTTGGAGTTCTGAAGA
AGACAAGTTAAAAACATGCTGGGCAAAGAGGGTCAGTCCAACTTTGTATG
AAAATTTAGTTAAATACTTTGGAACTAATCTGCCAATTCCTCAGGAGGTT
AGTTAACACATGAATCGTAAGAATGGCTTTTAGGGAATTTCAATTTTCTT
CTTGGAGGGAGGGGGGGACAGGAAATTGCAAAATTTCCTTGAGATAAGCA
GATATAAAATATTAATTGTCTGGATNATAAGGATTTCATTACAGTTCCTG
CAATAAAACGGGCTGTTGCCATGGAAAATTTGGGTCTCACAACTTTCCTA
TCAAAATTCATGTTGACAGAAGAAAATGGGAAATCAATTCTTTCTTTAAA
TTCAAAGGATGAAATTGTAGTCACTATTGCACATGAGGTTACACATCAGT
GGATGGGKAATGTTTGAAGTTTATTCATTTAATCAAAAAATTGTTTTTGT
ATTTTTATTTTATAAAATAGGTGATATTGTAA
back to top
Add to Basket