EMLSAT00000002669, EMLSAT00000002669-698516 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002669
Unique NameEMLSAT00000002669-698516
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1541supercontigLSalAtl2s1541:42228..43412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002669 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002669EMLSAG00000002669-685435Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011821EMLSAE00000011821-720749Lepeophtheirus salmonisexon
EMLSAE00000011822EMLSAE00000011822-720750Lepeophtheirus salmonisexon
EMLSAE00000011823EMLSAE00000011823-720751Lepeophtheirus salmonisexon
EMLSAE00000011824EMLSAE00000011824-720752Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770369auto770369Lepeophtheirus salmonispolypeptide
EMLSAP00000002669EMLSAP00000002669Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002669

>EMLSAP00000002669 ID=EMLSAP00000002669|Name=EMLSAP00000002669|organism=Lepeophtheirus salmonis|type=polypeptide|length=311bp
MIQLLKVIFIGVIVGILLLTTWNIFVIHNFYLFNNLKSYSNTFHKDISSN
DSQIPLFVKTVKNHTMFFKENIPKDTSFFFLETSGKSQLTLKEFCAIESA
ANIDLTYVFKGTVIENLWLENKIQNSAHYNSHMSDILRSWFVYNYGGTYL
DTDIIVLKELPLDYNYAGVENTESFLVTGSIIHFTHHHKLLKMILEDISK
KFDGSDWINNGPAMFTNNIIKLCKGKTMKTINEAKCHNIQLFPPNAFFSV
FYPSWQLFFNNDSREDVKNRLKDSLIAHYWGKLSSKTKIKPGMPIHDLAL
EKCPLTAKYFQ
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mRNA from alignment at LSalAtl2s1541:42228..43412-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002669-698516 ID=EMLSAT00000002669-698516|Name=EMLSAT00000002669|organism=Lepeophtheirus salmonis|type=mRNA|length=1185bp|location=Sequence derived from alignment at LSalAtl2s1541:42228..43412- (Lepeophtheirus salmonis)
ATGATTCAATTGTTAAAAGTTATTTTTATTGGTGTAATTGTCGGTATTTT
ATTGTTAACCACTTGGAACATATTCGTCATCCACAATGTAAGTTTACATT
TGAAAATAAATAAAAAATTTACTATCGTTCATATAATACCATACTTTATT
TTATTTGTACAGTTCTACCTATTTAACAATCTAAAATCCTATTCCAATAC
TTTCCACAAAGATATCTCCTCAAATGATTCTCAAATCCCATTATTTGTTA
AAACCGTCAAAAATCATACCATGTTCTTCAAAGAAAATATTCCAAAAGAC
ACAAGTTTCTTCTTTTTGGAGACCTCGGGGAAATCCCAATTGACATTGAA
GGAATTTTGCGCCATTGAGAGCGCAGCTAAGTTACATCCAAAGCGAAAAG
CCTTTTTTTTTAATGACGAATAAAACGTATGAAAGAAGTGCAGTTGTTGA
AAAAATGATGGAAACATATTCCAATATTCAATTCCTTAGCATTGATTTAA
CCTACGTTTTTAAAGGAACGGTAATTGAGAATCTTTGGCTTGAAAACAAA
ATTCAAAATAGTGCTCACTACAACTCCCACATGAGTGATATTTTGCGATC
TTGGTTTGTCTATAATTATGGGGGCACTTATTTGGACACGGATATTATTG
TTCTCAAGGAATTGCCTCTTGACTATAATTATGCTGGAGTTGAGAACACA
GAGTCATTTTTAGTCAGTAAGACAACCCCTACTATAACTCGTAAGATATT
AATATCACTATTTCTATTTTCTTGACTTCAGCGGGTAGTATCATACATTT
CACTCACCATCACAAACTCTTAAAAATGATTCTTGAGGATATTTCTAAAA
AATTTGATGGAAGCGATTGGATCAATAATGGACCTGCAATGTTTACTAAC
AACATCATCAAACTTTGTAAAGGCAAAACCATGAAAACAATCAATGAGGC
TAAATGCCATAATATTCAACTATTTCCTCCAAATGCATTTTTCTCCGTTT
TTTATCCATCCTGGCAATTGTTTTTTAATAATGACTCCAGGGAAGACGTC
AAAAACAGACTTAAAGATAGTTTAATAGCGCACTATTGGGGAAAGCTATC
ATCAAAAACAAAAATCAAACCAGGAATGCCCATTCATGATCTGGCTCTTG
AAAAATGCCCCCTCACCGCCAAGTACTTCCAATAG
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