EMLSAT00000002701, EMLSAT00000002701-698548 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002701
Unique NameEMLSAT00000002701-698548
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s155supercontigLSalAtl2s155:425338..425688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002701 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002701EMLSAG00000002701-685467Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011999EMLSAE00000011999-720927Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777552auto777552Lepeophtheirus salmonispolypeptide
EMLSAP00000002701EMLSAP00000002701Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002701

>EMLSAP00000002701 ID=EMLSAP00000002701|Name=EMLSAP00000002701|organism=Lepeophtheirus salmonis|type=polypeptide|length=116bp
MGRFIQNCGDFWAIYNYIELASEIRDKCDYCLSKKGVKSMWEDDSNCNGG
RGAYSNPVNRRKSFDRGLDVNWLEVMMSLIGEALEGXSDLINGTVVSLRN
QSDKISICLATVYDGI
back to top

mRNA from alignment at LSalAtl2s155:425338..425688+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002701-698548 ID=EMLSAT00000002701-698548|Name=EMLSAT00000002701|organism=Lepeophtheirus salmonis|type=mRNA|length=351bp|location=Sequence derived from alignment at LSalAtl2s155:425338..425688+ (Lepeophtheirus salmonis)
ATGGGAAGATTCATTCAAAACTGTGGAGATTTTTGGGCCATATATAATTA
TATCGAGTTAGCCTCTGAGATAAGGGATAAATGTGACTATTGTCTCTCTA
AAAAGGGAGTAAAATCAATGTGGGAAGACGATTCTAATTGTAATGGAGGA
CGCGGGGCTTATAGTAATCCTGTAAATAGAAGAAAATCCTTTGACAGAGG
ACTAGATGTGAATTGGCTAGAAGTGATGATGTCTTTAATAGGTGAAGCAT
TGGAAGGGMCTAGTGATTTGATTAATGGTACTGTTGTTAGTCTTCGCAAT
CAATCAGATAAAATATCAATTTGCTTGGCTACAGTATATGACGGGATCTG
A
back to top
Add to Basket