EMLSAT00000002706, EMLSAT00000002706-698553 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002706
Unique NameEMLSAT00000002706-698553
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1560supercontigLSalAtl2s1560:42518..43682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002706 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002706EMLSAG00000002706-685472Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012028EMLSAE00000012028-720956Lepeophtheirus salmonisexon
EMLSAE00000012029EMLSAE00000012029-720957Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770390auto770390Lepeophtheirus salmonispolypeptide
EMLSAP00000002706EMLSAP00000002706Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002706

>EMLSAP00000002706 ID=EMLSAP00000002706|Name=EMLSAP00000002706|organism=Lepeophtheirus salmonis|type=polypeptide|length=367bp
MILGGSSHTTWVVILIISMEIIPSNKRAIIGSLFQMFWKLGFINLALLAY
LIRDHFYLQLAMSLFNLIFISYIWILPESPRWLLSRGKVEEAKKYLRWIA
IWNKPPGYSDELLDEKIQMFLKNEVKHEQFEEDPSSFTHIVQFILTNTKV
RVKYILGKSILRRRLGLIVYPWMVTGMSYYGIFLSVKLLNASKYIIIVVA
SVVDIFIQFFAIYFFDKFGRIPTLMFTFSICGISGILIFFTQASDTIIRS
TLTIVGKTLSSVSFQGLGLLGPELFPTPIRSEVFSIMDSFSKFGAAIAPF
AVDLMSIIDYSLPNVFFGIMILLGGICFLFLPETKGIDVPETVEELKLAS
DRTVMNKLIKCCRKENS
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mRNA from alignment at LSalAtl2s1560:42518..43682-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002706-698553 ID=EMLSAT00000002706-698553|Name=EMLSAT00000002706|organism=Lepeophtheirus salmonis|type=mRNA|length=1165bp|location=Sequence derived from alignment at LSalAtl2s1560:42518..43682- (Lepeophtheirus salmonis)
ATGATTTTAGGAGGTTCCTCTCACACAACATGGGTCGTAATTTTGATCAT
ATCTATGGAAATCATTCCATCTAATAAAAGAGCTATAATAGGCTCTCTTT
TTCAGATGTTTTGGAAGTTGGGTTTCATAAACCTAGCTCTCTTGGCATAT
CTTATTCGAGATCATTTCTATCTCCAATTGGCAATGTCCCTTTTTAATCT
TATATTTATTTCATATATTTGGATCCTCCCAGAATCACCCCGATGGCTCC
TTTCAAGAGGAAAAGTGGAAGAAGCAAAAAAATATCTCCGATGGATTGCA
ATTTGGAATAAACCTCCAGGTTATAGTGATGAACTTCTAGATGAAAAAAT
TCAAATGTTTTTAAAGAATGAAGTTAAGCACGAACAATTTGAGGAAGATC
CCTCCTCCTTCACACACATTGTTCAATTCATTTTGACAAATACTAAAGTT
AGAGTTAAGTACATATTGGGCAAATCTATTTTACGAAGGCGATTGGGACT
TATCGTATATCCGTGGATGGTCACGGGCATGTCATATTACGGGATATTTC
TTTCAGTAAAACTATTAAATGCTAGCAAATATATTATCATCGTTGTTGCG
AGTGTTGTTGATATTTTTATTCAGTTTTTCGCCATCTACTTCTTTGATAA
GGTAAAACAAATCAAATTGGTTTAATTTAGATTTAAATATGTTTATATCT
TATATTATTCAGTTTGGAAGGATTCCTACTCTTATGTTTACATTTAGTAT
TTGTGGCATCTCAGGAATACTAATATTTTTCACCCAGGCGAGCGATACAA
TTATACGTTCAACACTTACTATTGTGGGTAAAACTCTTTCATCAGTAAGT
TTTCAAGGACTCGGCCTTCTAGGACCAGAATTATTTCCAACTCCAATTCG
AAGTGAAGTATTCAGTATCATGGATTCCTTCTCCAAATTTGGAGCTGCTA
TTGCACCTTTTGCTGTTGATCTAATGTCAATTATTGATTACTCACTACCG
AATGTTTTCTTCGGGATCATGATTTTACTTGGCGGGATTTGTTTTCTTTT
TCTACCTGAGACTAAAGGCATTGATGTTCCAGAGACGGTCGAAGAACTTA
AACTTGCCTCAGATCGTACCGTTATGAACAAGCTTATAAAATGTTGTAGA
AAGGAAAATTCATAA
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