EMLSAT00000002779, EMLSAT00000002779-698626 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002779
Unique NameEMLSAT00000002779-698626
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s15supercontigLSalAtl2s15:996855..998038 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002779 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002779EMLSAG00000002779-685545Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012293EMLSAE00000012293-721221Lepeophtheirus salmonisexon
EMLSAE00000012294EMLSAE00000012294-721222Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780228auto780228Lepeophtheirus salmonispolypeptide
EMLSAP00000002779EMLSAP00000002779Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002779

>EMLSAP00000002779 ID=EMLSAP00000002779|Name=EMLSAP00000002779|organism=Lepeophtheirus salmonis|type=polypeptide|length=300bp
MGIHQKLELSAPTKRKCKITWXIIFSLFGAAAFSLLLFLVPFIVDPALAT
ILADFTTQNVSCVVTELAFRQGQGNCSWSSCREGCTRDVYTCFQIHVNYT
DLSAQLQSGHLFVNARGCGYPPSVKCDLFYEQYEYYXKNNLRXXCHYSRK
NGSVVVTEVDVPVQVFNLVISISFPLLILIISILAVIFIQKFIRLKDDKS
CFEERLEIQSEPDENDADTIMSASDPGGSNLNDMLQGFNGMSSTSSLPRE
PPPNHFYNENLKRKSDHIELPTLSKRIRRTEINPVLTNFIIEDKSMKKIH
back to top

mRNA from alignment at LSalAtl2s15:996855..998038+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002779-698626 ID=EMLSAT00000002779-698626|Name=EMLSAT00000002779|organism=Lepeophtheirus salmonis|type=mRNA|length=1184bp|location=Sequence derived from alignment at LSalAtl2s15:996855..998038+ (Lepeophtheirus salmonis)
ATGGGTATACATCAAAAGCTGGAACTGAGTGCACCCACCAAGAGAAAATG
CAAAATTACATGGKCCATCATTTTCTCCCTCTTTGGAGCCGCTGCATTCT
CACTCCTTCTCTTTCTCGTTCCATTCATAGTGGATCCCGCATTAGCCACG
ATCCTTGCAGACTTTACTACCCAAAATGTGAGCTGTGTTGTGACGGAGTT
AGCGTTTCGCCAAGGGCAAGGGAACTGCTCTTGGTCTAGCTGTCGAGAGG
GATGTACACGAGACGTTTATACTTGCTTTCAAATCCATGTAAATTACACA
GACCTTTCTGCTCAACTCCAAAGTGGGCATCTCTTTGTGAATGCCCGAGG
CTGTGGTTATCCTCCTTCTGTTAAATGTGATCTATTCTACGAGCAATATG
AGTATTATCAKAAAAATAATTTGAGATRCGKCTGCCACTATTCGCGGAAG
AATGGATCTGTCGTTGTAACGGAGGTGGATGTGCCGGTACAAGTGTTTAA
TTTAGTTATCTCCATCTCCTTTCCACTCTTGATTCTCATCATATCCATTT
TGGCTGTTATATTCATTCAAAAATTCATTCGTTTGAAAGATGATAAATCT
TGTTTCGAAGAAAGGTAAGTTATGCAAAGCTTTTGCAATTCTCTATTAAT
GTATGGCCTCTCTCCCCATCACTATTATTTCAGGTTGGAAATACAATCAG
AGCCGGATGAGAATGATGCAGACACCATCATGTCTGCATCCGATCCAGGA
GGATCCAATTTAAACGACATGCTACAAGGATTCAATGGCATGTCCTCAAC
TTCCTCCTTGCCCCGAGAACCTCCTCCGAATCATTTCTATAACGAGAATC
TTAAAAGAAAATCGGATCATATAGAACTCCCTACTCTTAGTAAACGAATA
CGCCGGACTGAAATAAATCCTGTTCTAACAAACTTTATTATTGAGGACAA
ATCTATGAAAAAGATACATTGAGCTCCGGATTGTTTAATATGTGTGTAAA
ACAATCCATGGAAAGGACTGTGATTCCTTTGTGATGTCTAGGCAGGGAGT
TACATACATACATACCTACGACACGTGAGAGTGATCAAATCAAGATTTTA
GCCATGACCTCTTTTTATATACTCCATTATACAATATTTAGTTATATACA
TAAAATTGATTCAGAAATATAATATTATTTTTCG
back to top
Add to Basket