EMLSAT00000002789, EMLSAT00000002789-698636 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002789
Unique Name	EMLSAT00000002789-698636
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1610	supercontig	LSalAtl2s1610:6077..13923 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002789 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002789	EMLSAG00000002789-685555	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000012348	EMLSAE00000012348-721276	Lepeophtheirus salmonis	exon
EMLSAE00000012349	EMLSAE00000012349-721277	Lepeophtheirus salmonis	exon
EMLSAE00000012350	EMLSAE00000012350-721278	Lepeophtheirus salmonis	exon
EMLSAE00000012351	EMLSAE00000012351-721279	Lepeophtheirus salmonis	exon
EMLSAE00000012352	EMLSAE00000012352-721280	Lepeophtheirus salmonis	exon
EMLSAE00000012353	EMLSAE00000012353-721281	Lepeophtheirus salmonis	exon
EMLSAE00000012354	EMLSAE00000012354-721282	Lepeophtheirus salmonis	exon
EMLSAE00000012355	EMLSAE00000012355-721283	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto768608	auto768608	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002789	EMLSAP00000002789	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1610:6077..13923-

protein sequence of EMLSAP00000002789

>EMLSAP00000002789 ID=EMLSAP00000002789|Name=EMLSAP00000002789|organism=Lepeophtheirus salmonis|type=polypeptide|length=1740bp
MGSVISAGAGQAPDRQAALFAGIPDSVPCTLINKVCASGMKSIMVASMSL
EVGNGSIAVAGGFESMSNIPYYLSRGTLPYGGAKLRDGLIEDGLTDVYNK
FHMGNCGENTAKXHGISREEQDEYAINSYKRSLAAYESRNICEEIFPVEI
THKRKPTVIVSEDEEFRKAKFGKFSKLPTAFQRENGTVTAGNASTLSDGA
XXTIIASESAVSEHSLKPLAKIIGYADGATMPIDFPIAPIFATEKLLKQV
GLKAADIDLWEINEAFSVVVLANMKILGLDPSKVNIHGGAVSLGHPLGAS
GARIVNHLVYALKPGQKGIASICNGGGVERGAALLIIWIILLPIRFALLN
TTKSSFIFSFTTSTPLVLNGVEISRQSEYDKDVYLPYDKTYRKMSLNFQF
ADTRCEINQWYCNGLCIHRRKRCSIRGGCHPQYPMSCERKDACFRSEDDC
WQRACTGEECQWDSNSAQLGMKQRRYLASCPDEKNRLNPCDTDSNPHLPR
GIRQQYLCFYNDEVYCPIDKACAHISSKCFKNRYNSYNNNPVYPTQNEHI
NNLLQNQLDDLAPPYSNPGVMDLYNRGVNNIHLRPVDPGLRQSNNYPSMY
SNSDLRQHHQNPNSNWRNPNCPNKWTPCYGMCMDSDYPFKCGDGLCLSVN
DMQFYRECEGACIRNHVSCNGGCRLGXSPCLTRSQCFKDPEGRCDNRRDC
WDATDETVMSSKGRRDLGLFNAPGDLDDLGVSDDDDLEQELNQLLSKGAN
KKPKAKPKKPTVSSKELEAMVNFCLADSSDDIDIDIEGDDADLLDALHEL
ESDKEEIPEVPTPTQPPSQNQDDKIYGNSDLVAIVESRIEMYTSAKKVAE
STGDSSHAQRYGRALGRLKEIKRQLKLGKPVDENNIPPPLSENQIKQLSK
IEVPTTPXHLPTPTPPLPKPPVSINASNQDQELMELKIKRESFKKEALAA
KDRQDKEAALQGLRKVKEMDQLIKNYGSPSSKSATKEQEXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQIDKDKP
IQIPSNMDEVPTTDSSVFVAPSPPKTVLDSLNQGLLFYEKEAETXKNEGN
GSKXRRIGRICKQYQGAIKTHKAGKPIMDKXPVPFGYPPIPVGDNDPAPN
PTVESHEKTNQPASKSLTPSKTEASNHSIQGKQLRILLERQSLFKSAALD
AKKSGQFNQAKEYLRQYHGFDNLIEASRGGLPVDLNTTPVPPQLDKSDDS
SMDFEVISWQDSTDEGMSRQEMFQKLEKELIDQVKMCDTNKKHFKSTGDI
GSSNKFHQMEVHTKKDLEALRHAFKRADPVPKFHYEVRSFSRVVCNTDLS
DNDVELSIIEGNNFRGDKSIDTYVCFEFPYPKEEPFKGETSKVKDSISPK
FDHTTTIPLSIKEKSCQRIFKRHSVKCDIWIDRGFFRKDILLGSVQIKLQ
PLETQCTIHECFPIMDGRKAAGGTLEXRVRLRNPILAKQGMPLWXEDWEV
TPPRKRSRRYSSTSSSSSLESSRQTLRKRSLSCSSYSSDSLEGEQSRSRP
LELSEDADTELMCHRKRALALGHFRLLYRIDGGVSLEDTKTFRDAMRDFD
GKIRYVKVPTGFVGSHYPKTRYSKLRISQPCPGIGTRFNVVWSLPSGEVQ
IDYSVKLYDFDAIQSVEIECDAKSPKSPWFGLVDPRVIPTYDEKVNFDAN
VFWTVGFLFKHFRTCGIEEWDKEISDLRNSFLDNRDNVSN

mRNA from alignment at LSalAtl2s1610:6077..13923-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002789-698636 ID=EMLSAT00000002789-698636|Name=EMLSAT00000002789|organism=Lepeophtheirus salmonis|type=mRNA|length=7847bp|location=Sequence derived from alignment at LSalAtl2s1610:6077..13923- (Lepeophtheirus salmonis)
TTCTTTAGCCATTCAAGAAGCCCTTGCGCAGTCTGGAATTCCAAAAGATA
AAGTGGATGAGGTCTACATGGGTTCCGTCATCTCTGCTGGAGCTGGACAG
GCACCAGATCGGCAAGCAGCTTTGTTTGCCGGGATCCCAGACTCAGTGCC
TTGTACACTCATTAATAAAGTATGTGCCTCAGGCATGAAGTCCATTATGG
TAGCTTCAATGTCTTTAGAAGTTGGGAATGGATCTATTGCTGTTGCAGGG
GGGTTTGAGTCCATGTCCAACATTCCATACTATCTCTCAAGAGGAACTCT
GCCGTATGGAGGAGCCAAACTTAGAGATGGTCTTATTGAAGACGGTCTCA
CGGATGTTTATAACAAGTTTCACATGGGGAATTGTGGTGAGAATACGGCT
AAGGKACATGGGATTTCAAGAGAAGAGCAAGATGAATATGCAATTAATAG
GTTTGCCTCATTATTATCTTAGTTTTAATGCAGTATTAATTTATTAACAT
ACTTTGACCTTCTCTTCAATACATTAATTAACATTTCCATATTTTTTAAC
AGCTACAAACGATCACTGGCGGCGTATGAGTCAAGGAATATTTGCGAGGA
AATTTTCCCTGTTGAAATCACACACAAGAGAAAACCTACAGTTATTGTAT
CTGAAGACGAAGAATTTCGTAAAGCTAAATTTGGTAAATTTTCCAAGTTA
CCCACTGCATTTCAAAGGGAAAACGGTACTGTTACGGCGGGGAATGCTTC
TACTCTGAGTGATGGCGCASCCNCTACCATTATCGCCTCTGAAAGTGCTG
TTAGTGAGCATTCCTTGAAACCCTTGGCTAAGATTATTGGTTATGCAGAT
GGAGCTACAATGCCCATTGATTTCCCCATTGCTCCTATATTTGCAACAGA
AAAACTACTTAAGCAAGTTGGATTAAAGGCAGCAGACATTGACTTGTGGG
AAATCAACGAAGCTTTCAGTGTGGTGGTCCTTGCTAACATGAAGATTTTA
GGTTTAGATCCTTCCAAGGTTAATATTCATGGTGGAGCTGTCAGTTTAGG
ACATCCTTTGGGTGCATCTGGTGCTAGAATTGTAAACCATTTAGTTTATG
CACTAAAGCCAGGACAAAAAGGAATTGCTAGTATCTGTAATGGTGGAGGT
GGTGCGAGTTCTATTTTAATTGAAAAATTGTAATAAAAAGTCCCAAGTAT
TATTCTCTCTATATCGAAACCTACTATAGGAGAGGATGCAAATCTACTAT
ACAATTCAAGGCCACTGCTTTCCCTTACCAGCATTACTTTCTTTTTCTCT
TCTATTATTTTTTATATAGAGTAAATATATATTACAATATGTCAAAGTAA
GGCCCATTCCTGGAAAACGAAACTAAAATCGATTTGGTTTTTGTAGTGTG
TTCGTAAAGTATGAGTTCTTAGTTAAATTCTAATCCATGGACAATGCCAT
TTTTTATCTCAGTGGAAAGGGGAGCAGCTCTTCTTATAATATGGATCATT
CTCCTCCCAATTCGTTTTGCCTTACTAAATACAACCAAATCATCCTTTAT
ATTTTCCTTTACGACTAGCACTCCTTTGGTTTTGAATGGAGTAGAAATAT
CTCGACAATCAGAATATGATAAAGATGTTTATTTACCTTATGACAAAACT
TACCGGAAAATGTCACTAAATTTTCAATTTGCAGATACTCGTTGTGAAAT
AAATCAGTGGTATTGTAATGGTCTCTGTATTCATCGGAGAAAAAGATGTT
CTATTCGTGGAGGATGTCATCCTCAATATCCTATGTCCTGCGAAAGGAAG
GATGCATGCTTCCGTTCTGAAGATGATTGTTGGCAACGGGCATGCACTGG
GGAAGAATGTCAATGGGACTCAAATTCTGCTCAATTAGGCATGAAACAAA
GGAGGTATCTAGCGTCTTGTCCAGATGAAAAAAATCGCTTGAACCCATGT
GATACAGACTCTAATCCTCATTTGCCAAGAGGAATAAGGCAACAATATCT
TTGCTTTTATAATGACGAAGTATATTGTCCAATTGATAAAGCTTGTGCTC
ACATCTCCTCTAAGTGTTTTAAGAATCGTTATAATTCCTATAACAATAAT
CCCGTCTATCCTACCCAGAATGAACACATAAATAATCTACTTCAAAATCA
GTTAGACGATCTTGCTCCTCCCTATAGCAACCCTGGCGTAATGGATCTTT
ATAACCGTGGAGTTAATAATATCCACCTTAGACCCGTTGATCCGGGATTA
AGACAATCTAATAATTATCCATCAATGTATTCCAACTCGGATTTAAGACA
ACACCACCAAAATCCAAATAGCAATTGGAGAAATCCAAACTGCCCTAATA
AATGGACACCTTGCTATGGTATGTGTATGGATTCCGATTACCCATTTAAA
TGTGGTGATGGACTATGCTTAAGTGTAAATGATATGCAGTTTTATCGTGA
ATGTGAAGGAGCTTGCATAAGAAACCATGTATCTTGTAATGGCGGTTGTC
GTCTGGGATMCTCTCCTTGTTTAACTCGTAGCCAGTGTTTTAAAGATCCG
GAAGGACGATGCGATAATCGTAGGGACTGTTGGGATGCAACAGATGAAAC
GGGTTGTTTCAGAACTTTTTTAAAATGGGTTGCACTGCCAACTCTAGTTT
TCTTATTCTTAGTGATCATTGCCGTATATTTTACTTTGGGATGGTTTATT
CGACAAACTTTAACCTCAAAATAATGTAAAAGTCCTTGAATATGTATCTG
TGGTAGAATTCTTTCTAGTAACGAGATTTTAGAGAAAATAAATGCATAAA
TATATACATCTATATCTATTTTAAATTAGTCTTGATTCTCCAAATTTTAT
TTTTATCTTTATTTATTAGTCATGAGTTCAAAAGGGCGAAGAGATTTAGG
GCTTTTTAATGCCCCTGGAGATTTAGATGATCTGGGTGTAAGTGATGATG
ATGATTTAGAACAAGAGCTAAATCAACTATTGAGCAAAGGTGCGAATAAA
AAACCAAAGGCGAAACCCAAAAAACCTACTGGTATGTGCTGGTAAACATA
TTTAATGTCATTCTATTATTCATCAATATGTGTATATTTTAATTTGATTA
AAATTAGTATCCTCCAAAGAACTTGAAGCTATGGTTAACTTTTGTCTTGC
TGATTCTTCTGATGATATTGATATTGATATAGAAGGAGATGATGCAGATC
TTCTGGATGCACTTCATGAGTTGGAATCAGACAAAGAGGAAATACCTGAG
GTGCCGACMCCGACACAACCACCATCTCAAAACCAAGATGATAAAATCTA
TGGAAATAGTGACCTTGTTGCCATCGTTGAATCAAGGATAGAGATGTATA
CATCGGCAAAAAAAGTAGCAGAGTCCACTGGAGATTCTAGCCATGCACAG
AGATATGGTAGAGCTCTAGGGCGGTTAAAAGAAATTAAGAGGCAGTTGAA
ATTAGGGAAACCAGTGGATGAAAATAATATTCCTCCTCCTCTATCTGAGA
ATCAAATTAAACAATTATCCAAAATAGAAGTCCCCACTACACCAYCCCAT
TTACCCACACCAACACCGCCACTACCAAAGCCTCCAGTTTCGATCAATGC
ATCAAATCAAGACCAAGAATTAATGGAATTGAAAATTAAAAGAGAGAGTT
TTAAAAAAGAAGCCCTTGCTGCAAAGGACAGACAGGATAAAGAGGCTGCT
CTACAGGGATTAAGAAAAGTCAAAGAAATGGATCAACTTATAAAAAATTA
TGGATCGCCTTCATCTAAATCAGCTACTAAAGAACAGGAGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
ACCAAATAGATAAGGATAAACCAATTCAAATTCCATCTAATATGGATGAA
GTTCCCACAACTGATTCTTCTGTATTTGTTGCTCCCTCTCCTCCTAAAAC
TGTCTTGGATTCCCTCAATCAAGGATTACTCTTTTATGAAAAAGAAGCGG
AAACTGYAAAAAATGAAGGCAATGGATCAAAAGMCCGTAGAATCGGGCGC
ATATGTAAACAGTATCAAGGTGCCATCAAGACTCATAAAGCGGGAAAACC
AATTATGGATAAATTMCCCGTCCCTTTTGGTTATCCCCCTATACCTGTAG
GTGATAATGATCCAGCACCAAATCCTACCGTTGAAAGCCACGAAAAAACT
AATCAACCAGCCTCCAAAAGTCTTACTCCCTCCAAAACAGAGGCAAGTAA
TCATTCCATTCAAGGAAAGCAACTACGAATTCTCCTGGAGAGGCAATCAT
TGTTTAAGTCTGCTGCTTTAGATGCTAAGAAATCTGGGCAGTTTAATCAA
GCCAAAGAGTACCTTCGTCAATATCACGGTTTTGATAATTTGATTGAGGC
TAGTCGTGGAGGNTTGCCAGTGGACCTTAACACAACTCCCGTTCCTCCTC
AACTTGACAAGAGCGATGATTCCTCTATGGACTTTGAAGTTATTTCTTGG
CAAGACTCAACTGATGAAGGCATGAGTCGCCAAGAAATGTTTCAAAAGTT
AGAAAAGGAACTTATTGATCAAGTAAAAATGTGTGACACAAACAAGAAAC
ACTTTAAATCCACTGGCGATATTGGGTCATCCAACAAGTTTCACCAAATG
GAAGTTCATACCAAAAAGGATTTGGAGGCACTCAGACATGCCTTCAAAAG
GGCTGATCCAGTTCCCAAGTTTCATTATGAAGTAAGATCATTTTCTAGAG
TCGTTTGCAATACCGACCTCTCTGATAATGATGTGGAGCTGTCCATTATT
GAGGGAAATAATTTCCGGGGAGATAAGTCCATTGACACCTACGTTTGTTT
CGAATTTCCCTACCCTAAAGAAGAACCCTTCAAAGGAGAAACATCTAAAG
TAAAGGATTCAATATCTCCCAAGTTCGACCATACAACAACAATACCATTA
AGTATCAAAGAAAAGTCATGTCAACGAATATTTAAGAGACATTCAGTAAA
GTGTGATATCTGGATTGATCGAGGCTTTTTCAGGAAAGATATTTTACTAG
GAAGTGTTCAAATCAAACTCCAACCCTTGGAGACTCAGTGCACTATCCAT
GAATGTTTCCCCATTATGGATGGKAGAAAAGCTGCTGGAGGRACATTGGA
AGKTAGAGTCCGTCTTCGCAATCCTATTTTAGCAAAGCAAGTAGAAAAAG
TTCAAGAAAAGTGGCTGGKTATATCATTTTAATCATTTAATATTTAAACA
TAACGATATGAGACGATTAATATTCACTTAGATATATCTGTGATGCTTAC
CAAAATTATTTAATTTCTAAATTTTGCATTTCGCCTTATTTTTATAAGAA
ATCCATAATAATAAATTTATACAAGATTTAAGTTACATTGTTACATTTGT
ATGCAAATAAACTATTATATAGTTTGACTTTTTGAAAGTATTTTTGACCT
ATCGCTTTGATCAGGAATGATATAAAAAATATCATTTTGCCATAACATCA
CTTATGACGATGATTTTACATAATTGATCCACAATTAATTCCTTTTTTAA
GTAATGAACGTAACAAAACGCTAGCTAACAAAACATAAATGACGACTACT
TCTTCATGAGTAGCCTACAGCTTCTCCCAGTTCTCAACTTCAGAGTCTCA
TACTCTTGTTCAAGACGAACAACTTCACCAGATAAATCAATTTTGTCTCT
TTGAAACTTCTTAACTTTTGTTTGACAACTTTCTGTGGTGGGTGATACTT
TGACCTGTCCTATTTTGTTTTTAACAGATTTAATGTGCTCCTCAACTTTC
AGGATTTGCTGCCGTAATTCAGAATACTCTTTACTAAGTTCTGCTTCTAA
TTCATCTATTTCCCTGTTTAATATATCTGAGCTTTCTTTTAATTTCGGGC
AATTCTCAGAAGGTAGTGAAGACTATTTCCCACGAAGGAAAAAAAACAAC
ATAATTATCATATAGTTACACTGAATAGCCCACCTCATTCATGTTATTAT
TAATTTCTGTCGTATTTTTAAATTGTTGAAGAAAAGAATCAAAGCATTCT
TGACCCATAGACATGATACGAGAACTTTCGTCGACTCTTATATTTGTAAT
TTCTCTGTTTAATGCCTCTAACTCGATATCCACTTCCCTACGAGATTCGA
GTACTGAAAAAAGGACAAGATCCATGATAATGTAATAATTAACATTTGAC
TGGGAATAAATTAAAACATGTTATTTAATTATTACACAAATAGGAACATG
AGTTAAAAAGTATCTTTTTGAGGGGGATAACCTTCACTTATATCCTGTTG
AAGGGCACTATTCCGCGATTCCAATCCTTGGACTACGGATTTAATTCGGA
ATTCTCCTTCTTCGGCTATTTGACAATTTTCCACTTCTTTTTCCACCTCA
TTTTGCAAATGCCCAATTTTCCTTGTTAGATGATCCAATTCCTGCTTGGA
GTCATGGATTCGTCTAGAAATGGATTCTTGGAGGTCGGATTGCAGTGCAA
GTTGGGCTTGCATGAGTGATAAGTGGATGGAGAATGTCGGTTAAGATAGA
AAAGAAAATGGCGGCTTACCCGTATCTGGTTCGAACACTTGATTCTGAGC
GGTCCACTGGTGGTAGGCTAGGCTAGCTGCGCTGGTCAGTCTAAGTCCTT
TTGTCCTCTGATCTGATAACTCTTAGTGGATGGCCCTCCCTCAGTATCAA
TTGTGAATTGAGAATGGATCCTTCTTTCTCGCCCCTCTAGCTAAACAGGT
TCCTTGTTTAGAGATCATCCGTTTCAAGTACTTCAAGCCTCCTTCCTTGT
CTCTTGGTTAATGTCGAACAGCCACCGGAGTCCATCTTGGTCATCTCGAG
ATGATCATATCGAAGGGAATGCCTCTCTGGANCGAAGACTGGGAAGTTAC
ACCTCCTAGAAAGAGATCTCGAAGATATTCGTCCACTTCAAGCTCGTCCT
CCTTGGAGTCATCTAGACAGAGTATACTCACATTCACATTCTCTTTTATT
TTCAATCTCATTTTTCTCATTATTATTCATTCTATCCCTTAGCCCTACGA
AAAAGGTCCCTCTCTTGCTCTTCATATTCCTCAGACTCCTTAGAAGGAGA
GCAATCCCGTTCCCGGCCCCTAGAACTAAGTGAAGATGCAGACACCGAGC
TCATGTGCCATCGTAAAAGAGCTCTTGCCTTGGGTCATTTTAGACTTTTA
TATCGAATTGATGGAGGCGTGTCTCTTGAGGATACAAAGACGTTTAGAGA
TGCTATGAGGGATTTTGATGGGAAGATACGATATGTAAAGGTTCCTACTG
GATTTGTAGGCTCTCATTATCCTAAGACTCGCTATTCGAAACTAAGAATC
AGCCAACCTTGTCCTGGTATTGGCACTCGCTTTAATGTTGTCTGGTCTTT
ACCGAGTGGCGAAGTCCAGATTGATTATTCTGTAAAACTTTACGACTTTG
ATGCTATACAGAGTGTTGAAATTGAATGTGATGCCAAAAGGTATGATGAT
ATTCAGTTAAGAGAGGTCAATTATGATTATTTATTTATTTTTTGGTAGTC
CTAAGTCTCCATGGTTTGGCCTAGTGGATCCGCGGGTCATACCAACCTAC
GATGAAAAAGTTAATTTTGATGCAAATGTCTTTTGGACTGTTGGATTTCT
TTTTAAGCATTTTAGGACATGTGGAATTGAGGAGTGGGATAAAGAAATCT
CTGATCTTAGAAATAGTTTTTTGGATAATCGGGATAATGTTTCTAAT

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