EMLSAT00000002798, EMLSAT00000002798-698645 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002798
Unique NameEMLSAT00000002798-698645
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s16161supercontigLSalAtl2s16161:6..765 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002798 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002798EMLSAG00000002798-685564Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012387EMLSAE00000012387-721315Lepeophtheirus salmonisexon
EMLSAE00000012388EMLSAE00000012388-721316Lepeophtheirus salmonisexon
EMLSAE00000012389EMLSAE00000012389-721317Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767765auto767765Lepeophtheirus salmonispolypeptide
EMLSAP00000002798EMLSAP00000002798Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002798

>EMLSAP00000002798 ID=EMLSAP00000002798|Name=EMLSAP00000002798|organism=Lepeophtheirus salmonis|type=polypeptide|length=197bp
VCWFKKLKIHLFVDGKWSSWQSWGQCSASCGNGRRQRARECNSPSPAHGG
LSCFGNSVDXQVCNVRECPIDASWSLWTQWTSCTKTCGEGRRERQRNCDG
ALFGGRPCTGNSTVERDVIPCWIQVVCSLDGHWSSWAQWSTCSTTCGAGN
RQRRRDCNNPAPKFGGRRCAGADFENGPCSANQNCPIGENCLFLYYV
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mRNA from alignment at LSalAtl2s16161:6..765+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002798-698645 ID=EMLSAT00000002798-698645|Name=EMLSAT00000002798|organism=Lepeophtheirus salmonis|type=mRNA|length=760bp|location=Sequence derived from alignment at LSalAtl2s16161:6..765+ (Lepeophtheirus salmonis)
GTATGCTGGTTTAAAAAATTAAAAATTCATCTATTTGTAGATGGTAAATG
GTCAAGCTGGCAATCATGGGGACAATGTAGTGCCTCTTGCGGAAATGGAC
GAAGGCAAAGAGCCAGGTAACATAGAAAAAATCTCATTCATTTCTGAAAA
GTTGACTTAAAAAATAAATAATTTGATATTCTGTAGAGAATGTAACTCAC
CTTCTCCAGCCCATGGAGGATTGTCTTGTTTTGGAAATTCTGTAGATAAM
CAAGTATGTAATGTAAGAGAATGCCCCATTGATGCATCATGGTCTCTCTG
GACCCAATGGACATCATGCACTAAAACTTGTGGAGAAGGACGAAGAGAAA
GACAACGTAATTGTGATGGAGCACTCTTTGGAGGAAGGCCATGCACAGGC
AATTCAACTGTGGAAAGAGATGTAATTCCTTGTTGGATTCAGGTAGTCTG
TTCCCTTGGTAAGTATTGGCCCAACAGAAATAAACATTTGTGTATACTTA
CTTGATATGACTTAATCTTTCAATGATTAGATGGACATTGGTCTTCATGG
GCCCAGTGGTCAACATGTAGTACTACATGTGGTGCTGGAAATAGACAGAG
GCGAAGAGATTGTAACAACCCTGCTCCCAAATTTGGAGGCAGAAGATGTG
CTGGAGCTGACTTTGAAAATGGACCATGCAGTGCTAATCAAAATTGCCCA
ATTGGTGAGAATTGCCTTTTTTTATATTATGTTTAAAGGTAATAACTATC
ACTTGATCCA
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