EMLSAT00000002799, EMLSAT00000002799-698646 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002799
Unique NameEMLSAT00000002799-698646
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s16171supercontigLSalAtl2s16171:2..755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002799 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002799EMLSAG00000002799-685565Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012390EMLSAE00000012390-721318Lepeophtheirus salmonisexon
EMLSAE00000012391EMLSAE00000012391-721319Lepeophtheirus salmonisexon
EMLSAE00000012392EMLSAE00000012392-721320Lepeophtheirus salmonisexon
EMLSAE00000012393EMLSAE00000012393-721321Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767756auto767756Lepeophtheirus salmonispolypeptide
EMLSAP00000002799EMLSAP00000002799Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002799

>EMLSAP00000002799 ID=EMLSAP00000002799|Name=EMLSAP00000002799|organism=Lepeophtheirus salmonis|type=polypeptide|length=193bp
MRRDLLNESDINLFCADWRNGTIYPDYGQGAANTQIAGKMIAIFFNNVSE
IFEPIGPKLHLIGFSFGAQVCSFAGSNIKNCSRITVGLDPAGPSFREQNT
SFRLDKSDADFVDVIHTNGVNFTKGGIGLLEVSGHVDFYPFGGETQPYCN
NLFEEFLSGQEFGCSHYRAVYLFLESIRNDTCKMIGFPCPEGV
back to top

mRNA from alignment at LSalAtl2s16171:2..755-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002799-698646 ID=EMLSAT00000002799-698646|Name=EMLSAT00000002799|organism=Lepeophtheirus salmonis|type=mRNA|length=754bp|location=Sequence derived from alignment at LSalAtl2s16171:2..755- (Lepeophtheirus salmonis)
ATGAGACGCGATCTTCTAAATGAAGTAAGTTCTTCCTAAAGATTAAGTAC
AAGCTATAGTAATAACATGAAAAATGTATAGTCTGACATAAACTTATTCT
GTGCGGATTGGAGAAATGGAACGATATACCCAGATTACGGTCAGGGTGCA
GCCAATACACAAATAGCTGGAAAAATGATTGCAATTTTCTTTAATAATGT
CAGTGAAATATTTGAGCCCATTGGACCTAAGCTACATTTAATTGGCTTTA
GTTTTGGAGCACAAGTCTGTTCATTTGCCGGATCTAATATTAAGAACTGT
AGCCGGATTACAGGTGGGTTCTTTTTTATATATGTATTATATATATGAAT
AACGCATAATTTTTGCGAAAGTAGGACTGGACCCCGCTGGACCCTCATTC
AGAGAGCAAAATACATCTTTTAGATTGGATAAATCTGATGCAGATTTTGT
TGATGTTATACACACAAACGGTGTAAATTTTACAAAAGGAGGAATTGGTC
TTTTAGAGGTCTCTGGTCACGTTGACTTTTATCCTTTTGGAGGAGAAACT
CAACCATATTGTAACAATTTATTTGAGGAATTTTTATGTAGGTTTTAATA
AATGGATAACATGATAATATATAATTTTATTCATTTGACATAAATAGCGG
GACAAGAATTTGGTTGTAGTCATTACCGAGCAGTATATTTATTTTTGGAA
AGCATAAGAAACGATACATGCAAAATGATAGGATTTCCTTGTCCTGAAGG
TGTT
back to top
Add to Basket