EMLSAT00000002814, EMLSAT00000002814-698661 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002814
Unique NameEMLSAT00000002814-698661
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1623supercontigLSalAtl2s1623:31398..32936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002814 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002814EMLSAG00000002814-685580Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012481EMLSAE00000012481-721409Lepeophtheirus salmonisexon
EMLSAE00000012482EMLSAE00000012482-721410Lepeophtheirus salmonisexon
EMLSAE00000012483EMLSAE00000012483-721411Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769943auto769943Lepeophtheirus salmonispolypeptide
EMLSAP00000002814EMLSAP00000002814Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002814

>EMLSAP00000002814 ID=EMLSAP00000002814|Name=EMLSAP00000002814|organism=Lepeophtheirus salmonis|type=polypeptide|length=292bp
MGKACVVPGCRSGYKPLKSENNTNVIAFNKKIGYHMFPKDEALRKKWIQA
IPRKNWEPTKYSAICALHFDSSDLRTEPQDSNKFRRNKPNLIRKVLKKDA
IPTKFPSVPFHNPRRRTVVRSENDLSPCRLSIDHEKSINTLDTVDAVLTL
DELNSKLDRGLYPEKIFDKFNKVKKELLFHSICDTDSHGFTILFSLKVNS
DMSIQIWLKNEEFPFYRLKHIIRNNCIEKCSVLLNILAYMNSLTNSDYVY
NDTKDKKRDIKDELNECFSRLDFLLPEIEDIIKVEKLEESSF
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mRNA from alignment at LSalAtl2s1623:31398..32936+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002814-698661 ID=EMLSAT00000002814-698661|Name=EMLSAT00000002814|organism=Lepeophtheirus salmonis|type=mRNA|length=1539bp|location=Sequence derived from alignment at LSalAtl2s1623:31398..32936+ (Lepeophtheirus salmonis)
AAAATACTTGGCAACGTGTGACGTCATATTGTAAGTATGTGTGAGATTTT
TTTTTAAATTTTGTCATAGAAAAATACTATTTTAAATTAGAAATTATTGT
ACTTTTGAAAAAGTGCAATAACTTATAATTCCATGTTTATCCAACAAATA
AAGCCCGTTGTAGAATGAACGAAATTATACACTGAATATAGATCGCAAAA
ACCTATATTCAGTCCTGGATTTTTGATATTTTGTATTAGTATTTAGTATT
ACATAGTAAAAAAAGTGGAAAATTATTTTATCTTGTTATTTTTTGACAAT
CCTATCCTTGTCTTGTTTAATCCATCAATCATGCGGTTATTAGAACTAAG
CGTCTTTCATTGGCATCCATCAATATGGGGAAGGCTTGCGTAGTTCCAGG
ATGTCGTAGTGGTTACAAGCCTTTGAAGTCTGAAAATAATACTAACGTTA
TTGCATTTAATAAAAAGATAGGGTATCATATGTTTCCCAAAGATGAGGCT
CTTAGAAAAAAATGGATTCAAGCAATACCAAGAAAAAATTGGGAACCTAC
CAAATATTCTGCAATTTGTGCCTTACATTTTGATTCCTCGGATTTAAGAA
CGGAGCCTCAAGACTCTAATAAATTTCGACGTAATAAACCTAACCTAATT
CGGAAAGTGTTGAAAAAAGATGCCATCCCAACCAAGTTCCCCAGTGTTCC
CTTTCATAATCCGCGTCGTAGAACAGTTGTGAGATCAGAAAATGATCTTT
CTCCATGCCGATTAAGTATAGATCATGAAAAAAGCATTAATACTTTAGAC
ACCGTGGATGCAGTTTTGACGCTGGATGAACTTAATAGTAAACTAGATCG
AGGCCTATATCCAGAAAAAATATTTGACAAGTTCAACAAAGTGAAGAAGG
AATTACTTTTCCATAGTATTTGTGATACGGATAGCCATGGGTTTACTATT
TTATTTAGTCTAAAAGTTAACTCAGATATGTCAATTCAAATTTGGTAAAT
AATTATTTTTCAGAGTAAATTTCCTTTCATTAAATCATGTTTATCTATTT
AGGTTGAAAAATGAAGAATTTCCTTTTTATAGACTGAAGCACATCATCAG
AAATAATTGTATTGAGAAGTGTAGTGTACTTCTTAATATTTTGGCCTATA
TGAATTCCTTAACTAATAGTGATTATGTATATAACGATACAAAAGACAAG
AAACGTGACATTAAAGATGAACTTAATGAGTGTTTTAGCCGTTTGGATTT
TTTATTACCCGAAATAGAAGATATTATAAAAGTGGAAAAATTAGAAGAAT
CGTCGTTTTGATTGGCTTATTGCTCTAGGGATTGTCATTATATATATTTT
TATTATACCAAGAGCATCCTGAAAAATCAATACTGTCTCTAAACAAGTTT
TTTTCATTATCAAGAAATGGAATAATCCACGATTTTAATAGCATTTGACA
AAAGTATTCATTTTTGAATTGGTAAATATTATACACAAGTAAATAAAAAA
TATATAAATCCTAATCATTGTGATTGAAATAGCATTTTT
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