EMLSAT00000002862, EMLSAT00000002862-698709 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002862
Unique NameEMLSAT00000002862-698709
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s16595supercontigLSalAtl2s16595:2..760 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002862 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002862EMLSAG00000002862-685628Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012719EMLSAE00000012719-721647Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767990auto767990Lepeophtheirus salmonispolypeptide
EMLSAP00000002862EMLSAP00000002862Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002862

>EMLSAP00000002862 ID=EMLSAP00000002862|Name=EMLSAP00000002862|organism=Lepeophtheirus salmonis|type=polypeptide|length=253bp
DPAPRDVFQEIATDFFEVRGKHYLAIVDRYSNFLLVHKFSSAPTSKSLIS
SLLHHIATFGRPLRIFSDGGLQFTAAETQNFFARWGIAHRLSSPHFPQSN
GLAESAVKSIKALLLKTGNTESEAFQEGLLELRNTPLRHGSLSPSQIVFG
RPMRSRLPARNLSLAEDWQXXLNXXXRHIARQHEYAKNHYNKTSNELKPI
PIGSKVWIQDPTSKIWDRXATVQGKKQDREYLLLLPSGRTLCRNRRFIRI
LRT
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mRNA from alignment at LSalAtl2s16595:2..760+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002862-698709 ID=EMLSAT00000002862-698709|Name=EMLSAT00000002862|organism=Lepeophtheirus salmonis|type=mRNA|length=759bp|location=Sequence derived from alignment at LSalAtl2s16595:2..760+ (Lepeophtheirus salmonis)
GACCCTGCCCCTAGAGATGTTTTCCAGGAGATTGCAACCGATTTTTTTGA
AGTCAGAGGAAAGCACTATTTAGCAATAGTCGACCGATACTCCAACTTTC
TGCTCGTTCACAAATTTTCGTCAGCACCAACATCTAAGTCTCTTATCAGC
AGCCTCCTCCACCACATCGCCACCTTCGGTAGACCGTTGAGAATTTTTTC
AGACGGAGGACTTCAATTTACAGCAGCAGAAACACAAAACTTCTTCGCTC
GCTGGGGTATTGCACACAGATTATCATCACCACACTTCCCTCAATCCAAC
GGACTAGCAGAATCCGCCGTTAAATCAATTAAGGCTCTGCTCCTTAAAAC
TGGGAATACTGAATCTGAAGCCTTTCAGGAGGGGCTGCTCGAATTAAGAA
ACACACCTCTACGACATGGATCACTGTCCCCATCCCAAATCGTCTTTGGA
AGACCAATGAGATCAAGACTCCCTGCTCGCAATYTATCMCTTGCCGAGGA
TTGGCAGGAMCSCCTCAACGAMCMCGMCCGCCACATCGCCAGGCAACATG
AATATGCAAAGAACCACTACAACAAGACATCAAATGAGCTTAAACCCATC
CCTATTGGCTCCAAAGTCTGGATCCAGGATCCAACTTCCAAAATATGGGA
TCGGMCAGCCACTGTTCAAGGCAAGAAACAAGATAGAGAATATCTTCTCC
TGCTTCCATCGGGCAGAACACTATGTAGAAACCGACGCTTCATCCGGATT
CTCCGAACT
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