EMLSAT00000002863, EMLSAT00000002863-698710 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002863
Unique NameEMLSAT00000002863-698710
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1659supercontigLSalAtl2s1659:24105..25688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002863 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002863EMLSAG00000002863-685629Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012720EMLSAE00000012720-721648Lepeophtheirus salmonisexon
EMLSAE00000012721EMLSAE00000012721-721649Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769644auto769644Lepeophtheirus salmonispolypeptide
EMLSAP00000002863EMLSAP00000002863Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002863

>EMLSAP00000002863 ID=EMLSAP00000002863|Name=EMLSAP00000002863|organism=Lepeophtheirus salmonis|type=polypeptide|length=302bp
MTKLSLVLILVLCFLQTGIGRKSSGGSSSRGNIGGGGWSSGGSSSSSSGG
GWGTSSQNRGNIGGGGWNTGGSSSGGSAGGWNXGGSNSNTGSGKKGGLGS
LFGSKKTGSDSSSGGKKGILGSLFGKKKTSNEGFGKKKKGSKLKTLKKAA
VIGAVAYGGXKXGQLXSRFSNFGHSNNMGYGFNDWNRWRQQDGFLCRNNN
DCVWIDPSLECDDYKLDFSPSNLWFGGDVASIKGKCECRNNFLWNDDDLH
CLKRSGGFGGGGGGGLGGLIISIIVIMSMVCCCCVIGCVFIVKMFIGRAS
EG
back to top

mRNA from alignment at LSalAtl2s1659:24105..25688+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002863-698710 ID=EMLSAT00000002863-698710|Name=EMLSAT00000002863|organism=Lepeophtheirus salmonis|type=mRNA|length=1584bp|location=Sequence derived from alignment at LSalAtl2s1659:24105..25688+ (Lepeophtheirus salmonis)
ATGACAAAGTTATCTTTGGTCCTTATTTTGGTTCTCTGCTTCCTCCAGAC
TGGGATTGGACGGAAGTCTAGTGGAGGCTCTTCGTCTAGGGGAAACATTG
GCGGGGGTGGATGGTCCAGTGGCGGGAGTAGTAGTAGTAGTAGCGGGGGT
GGATGGGGCACTTCTTCCCAAAACAGGGGTAATATTGGAGGAGGGGGATG
GAATACGGGTGGATCTTCCAGTGGTGGAAGTGCTGGAGGATGGAACKCTG
GGGGGTGAGTGTACATTACCTGAATTCCCTGTCCTATTCATTATTTCATC
CCTTACTTTGGTAGGTCCAATTCGAATACAGGCTCTGGGAAGAAAGGAGG
CCTAGGAAGTCTCTTTGGAAGTAAAAAAACAGGCTCTGATTCTTCCTCTG
GAGGAAAGAAGGGCATCCTGGGAAGTCTCTTTGGTAAGAAGAAGACATCC
AACGAAGGATTTGGTAAAAAGAAAAAGGGCTCCAAGTTAAAAACCCTGAA
AAAAGCTGCTGTGATTGGTGCTGTAGCTTATGGAGGCTAMAAAGNCGGAC
AATTAASGAGCCGTTTTAGTAATTTCGGTCATAGTAATAATATGGGCTAT
GGATTTAATGACTGGAACAGATGGCGGCAACAAGATGGTTTCTTGTGTCG
CAACAATAACGATTGTGTATGGATAGACCCTTCTTTGGAATGTGATGACT
ATAAATTAGACTTCTCCCCCAGTAATTTGTGGTTTGGAGGTGATGTAGCC
AGCATCAAGGGAAAGTGTGAATGTAGAAATAATTTTCTATGGAATGACGA
CGATTTACATTGTCTTAAAAGGAGTGGTGGTTTCGGTGGCGGTGGTGGAG
GCGGGCTCGGAGGTCTCATCATTTCCATCATTGTCATTATGAGTATGGTC
TGCTGTTGCTGCGTGATTGGATGCGTCTTCATTGTAAAAATGTTCATAGG
AAGAGCTTCTGAAGGATAAGATAAGCAATGATATTGTGGATTCATGCAAC
ATATTATTATGCGAATATTCAATCGATTATATAAATTACTTTTCGATGGA
ACTTGTATGTATAACGTATATACTTGATGTGGACTGTGTTTTATCAGCTC
TGGTTCCTTATTATTCTCTATAATTATTAATTATACTCTACTTGGTATCA
AATACCTACATGCTTTTTCTTCTCTTTCTTACACTATCAGTGATCACTTT
GTTAAAGTAATATAGTCGTCAAATCGTTTTTATCACTTATTGTTTTCCTG
AGATCTTGCACTTTTTTATGAATGTTTTTTTTTTAACTTTTTTTTTAGAA
ATAAGAAATCAAATTACTGGAATCCCACATACCCTTCTGATGAATACTAT
AAATAAATCTTTTTATAAATGTAATGTTACTCATCGTTATCTATACGCTT
TTAATTTTATCAAAAGGTCCAATTTACTAATCAAATGCGCGATAAGCTTA
CTAACCACAAAAAGAAGAACACACTCACTACAGACTTAGACCCCAGTATA
AAAAGGAAGAATATTATCCTCTTAAATATTTATTATGTATTTTATCAAAA
TATAAGTTAACTAATATAATTCTAACTGCTTTTC
back to top
Add to Basket