EMLSAT00000002865, EMLSAT00000002865-698712 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002865
Unique NameEMLSAT00000002865-698712
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1659supercontigLSalAtl2s1659:31403..33391 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002865 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002865EMLSAG00000002865-685631Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012725EMLSAE00000012725-721653Lepeophtheirus salmonisexon
EMLSAE00000012726EMLSAE00000012726-721654Lepeophtheirus salmonisexon
EMLSAE00000012727EMLSAE00000012727-721655Lepeophtheirus salmonisexon
EMLSAE00000012728EMLSAE00000012728-721656Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769922auto769922Lepeophtheirus salmonispolypeptide
EMLSAP00000002865EMLSAP00000002865Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002865

>EMLSAP00000002865 ID=EMLSAP00000002865|Name=EMLSAP00000002865|organism=Lepeophtheirus salmonis|type=polypeptide|length=295bp
MSMRAFIRSSPLYDNARLLAPDGELLCTCDNRKASWYVSKGLGTYDSSST
EKVMVVRLSFEPQGRPIGTHGEYYTKDKENRCVVCGREDFVLKKYIVPRE
YRKHFPQNMRDHQSHDVLXLCFLCHKTWGLKDLQLRRKLSKHCNAPLSTQ
LNETESLDVMEVKSIISAARALSRNNGKIPQDRVNILESTLLDYFDADEI
TDSLLQKACSLKPNFKHDVNYSHGKLVFDHFTSDEQGIESLEILWRMHFL
STMEPKFLPELWSVNHHQNESIKCSNLNKVDSNELYRRYMDLKTY
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mRNA from alignment at LSalAtl2s1659:31403..33391+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002865-698712 ID=EMLSAT00000002865-698712|Name=EMLSAT00000002865|organism=Lepeophtheirus salmonis|type=mRNA|length=1989bp|location=Sequence derived from alignment at LSalAtl2s1659:31403..33391+ (Lepeophtheirus salmonis)
ATTTTATATATATTAATAAATACTAAATAGACATGAGTATGAGAGCTTTC ATTCGTTCGAGCCCCCTCTACGATAACGCGCGACTCTTGGCTCCTGATGG AGAACTCTTATGCACATGTGATAATAGGAAGGCTTCCTGGTATGTCTCCA AAGGATTGGGCACCTATGACTCATCCTCCACAGAGAAAGTCATGGTTGTC CGTCTCTCATTCGAGCCCCAGGGGCGCCCCATAGGAACTCATGGGGAGTA CTACACCAAAGACAAAGAAAATCGCTGCGTCGTTTGTGGGAGGGAAGACT TTGTTCTCAAAAAGTATATTGTGCCTCGAGAATACAGAAAACATTTTCCA CGTACGTACGCAGATCCTTTCCACTTCCCGGGATTCCTTTGTTTGTTCAT TATTTCTAAAAAATAATTGCTTCTTTCTTTTATTAGAGAACATGAGGGAT CATCAGTCCCACGATGTCTTATTMCTCTGCTTTCTCTGCCACAAAACATG GGGTCTCAAGGATCTGCAACTGCGTAGAAAACTCTCAAAGCACTGCAACG CTCCTTTAAGTACACAACTGAATGAAACTGAGGTAATCATATTTTATATG TGTATTCCATGTCAAATCGACAACAACAACAAAAAAAAAAATGTCACCCG ACCCTCTCAGATTTGGATGATTTTTGGAACACAAGCTCAAATTCATGAGT AAATTGAATATGTCCAAATTTCAGCAATTAAATTGTGCCTTTTGGGACCG AAATTTTCAACGACGTCAAAATTCTGTTTTCTTTTGTTAGTCTATATTAG TCATAAAATAAGATATAAACACGTACGTAAAATTGACCAAATTCCCGAAG AAAAGTAATATATCCCTGGGAGCTATGATTAAAAATCCAACACGATTTTT TGCACAGTGATACTCCAACATATGTAGATCATGTTGACAAAGTTTCATAT TCCTAAGAGTTTGGCATCTTTTTTTATTCTTGATTCTTGCTCGTGTAATT ATGATTTAAAAAAAAAAAATCGAAATTGAGGTAAACAAATTTAGATACTC TTGTTTTGATTTCAATTTTGGAATCCTCATACTTCAAACTCGTCAAGTAA CAAAGTTCAAGAGGTAAACTCTTTGGATCAAGAAATATACAAGAAAAAGT AGGGTTCAGTAATAAGACATTAAAGTGACGTTGACAATTTTTGACTAAAA AAGGCAGTAGGACAAGTATTAATATCTCATGAACAACTCAAATTTATGTG CTGAAATTTGGTGCATCTACTCTTGAATTTGAGCTTGTGTCCCATAAATC ATCCAAATCTGAGAGGGTCGGGTGAGATTTTTTGTATATTTGCCATGGAG TGACCCAAAAAAAGAGTATAATGAATAACCTCATCTTTTTGCAAGAGTTT AGACGTAATGGAAGTCAAAAGTATTATTTCCGCCGCAAGGGCTTTATCCA GAAATAACGGGAAAATTCCCCAGGATAGAGTCAACATTTTGGAAAGTACG CTCTTGGATTATTTTGATGCAGATGAAATCACCGATTCCCTCCTTCAAAA AGCATGTTCACTCAAGCCAAAGTAGTCTACAAGAATTTCCGATCAATTTC TTATACTAATATATATTTAAATACTTAGTTTTAAACATGACGTAAACTAC TCTCATGGAAAATTGGTATTTGATCATTTTACATCGGATGAGCAGGGAAT AGAGTCTCTTGAAATTCTCTGGAGAATGCACTTTCTTTCAACCATGGAAC CTAAATTTCTCCCAGAGTTGTGGTCTGTGAATCATCATCAGAATGAATCC ATCAAATGTTCCAATTTGAATAAGGTAGATTCTAATGAATTATATCGTCG ATATATGGACTTGAAAACATACTAGTGAATAAATAACTAGGCATTATGTA TGTTGAATTGTTTTGTTATTAGTTCAGCATGTATCTATGAGAGTGTATAA TTATTGGGTGATAATATTTCAGTATATTTAATTTTGAAA
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