EMLSAT00000002872, EMLSAT00000002872-698719 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002872
Unique NameEMLSAT00000002872-698719
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1662supercontigLSalAtl2s1662:5843..7182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002872 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002872EMLSAG00000002872-685638Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012751EMLSAE00000012751-721679Lepeophtheirus salmonisexon
EMLSAE00000012752EMLSAE00000012752-721680Lepeophtheirus salmonisexon
EMLSAE00000012753EMLSAE00000012753-721681Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768598auto768598Lepeophtheirus salmonispolypeptide
EMLSAP00000002872EMLSAP00000002872Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002872

>EMLSAP00000002872 ID=EMLSAP00000002872|Name=EMLSAP00000002872|organism=Lepeophtheirus salmonis|type=polypeptide|length=276bp
MTEQSLSQYEIIREENIRQKNEAMIEFGLKSRVQVTTKKVRKVRNKGRCN
GVPRRSNRLRYNGDDHTSLTQEAGRLKRHIEGVHEKIRKYQCRFCSRSFT
QSGSLKTHIEGVHEKIKKYQCNFCSRSFKFSGNLKRHIETLHGKIKKHQC
SFCSRSFSQSGNLKTHIEVTAINFLLHSGSLKAHIEGVHEKIKKFQCSIC
SRSFTQSGNLKTHIEGVHEKIKKYKCNVCSSTFTQFGNLKTHIESVHEKI
KKFQCTYCSRAFAKLELLENHIEGVH
back to top

mRNA from alignment at LSalAtl2s1662:5843..7182-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002872-698719 ID=EMLSAT00000002872-698719|Name=EMLSAT00000002872|organism=Lepeophtheirus salmonis|type=mRNA|length=1340bp|location=Sequence derived from alignment at LSalAtl2s1662:5843..7182- (Lepeophtheirus salmonis)
ATGACAGAACAAAGTCTATCCCAATACGAAATAATTCGTGAAGAAAATAT
CCGTCAAAAGAATGAAGCGATGATTGAGTTCGGCTTAAAGTCACGAGTTC
AAGTAAATGAAGTAAAATATTATATACCCATTATTTGCAAATATTTACAT
AGGTGACGACGAAAAAAGTTAGAAAAGTAAGGAATAAAGGTCGGTGTAAC
GGTGTCCCAAGAAGGAGTAATCGTTTGAGATATAACGGAGATGATCATAC
ATCATTGACCCAAGAAGCTGGAAGATTGAAGCGGCATATTGAAGGTGTTC
ATGAAAAAATAAGGAAATACCAATGTAGATTCTGCTCTCGCTCTTTTACA
CAATCTGGAAGCTTGAAAACCCATATTGAGGGTGTTCATGAAAAGATAAA
AAAATACCAATGTAACTTCTGCTCTCGTTCTTTTAAATTCTCTGGAAACT
TGAAGCGGCATATTGAAACTCTCCATGGGAAGATAAAGAAACACCAATGT
AGCTTCTGCTCTCGTTCTTTTTCACAGTCTGGAAACTTGAAGACGCACAT
TGAAGGTNTTCATGAGAAGATAAAGAAATTCAAATGTAGCTTCTGCTCTC
GCTCTTTTACACAAGCTGGACACNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTTT
CACAATTTAGTAACTTAAGGACCACCATTGAAGGTCTTCTTAAGAAGATA
AAATTCACATGTAGTTACTGCTATAAATTTTTTACTACACTCTGGAAGCT
TGAAGGCACATATTGAGGGTGTTCATGAGAAGATAAAGAAATTCCAATGT
AGTATCTGCTCTCGCTCTTTTACACAATCTGGAAACTTGAAAACCCATAT
TGAGGGGGTTCATGAAAAGATAAAAAAATACAAATGTAATGTCTGCTCTA
GTACTTTTACCCAATTTGGAAACTTGAAAACACACATTGAAAGTGTTCAT
GAGAAGATCAAAAAGTTCCAATGTACTTACTGTTCTCGTGCTTTCGCAAA
ACTTGAACTCTTGGAGAATCATATTGAAGGTGTTCATTAG
back to top
Add to Basket