EMLSAT00000002925, EMLSAT00000002925-698772 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002925
Unique NameEMLSAT00000002925-698772
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1689supercontigLSalAtl2s1689:12297..13160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002925 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002925EMLSAG00000002925-685691Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012943EMLSAE00000012943-721871Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769051auto769051Lepeophtheirus salmonispolypeptide
EMLSAP00000002925EMLSAP00000002925Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002925

>EMLSAP00000002925 ID=EMLSAP00000002925|Name=EMLSAP00000002925|organism=Lepeophtheirus salmonis|type=polypeptide|length=287bp
MRVRTRETYMTTPKGLTFFRCEWSHPILRIRGXVFISHGLGEHMGYYSDV
AVHLVRLGYIVFGHDHPGHGYSSDSKEDMFRECIECTLFDITVTTQSKYG
NKYSLFIIGHSIGALIALTALKKMPDLFSGAVLVAPPFKGLSKLYFKPLF
NLLLPFLSYFYPSYQIVKMSLNQLTRDVHQVKRMEKDPLYSKLGLKARST
YLIHQTIKTLQSRAHEIQVPLFIQQGACDGFTDPLSAQSLFDSVGSRRKH
IKMYDGAYHHLYIDIPSTKKEAISDAVTWIYFTQKFA
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mRNA from alignment at LSalAtl2s1689:12297..13160+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002925-698772 ID=EMLSAT00000002925-698772|Name=EMLSAT00000002925|organism=Lepeophtheirus salmonis|type=mRNA|length=864bp|location=Sequence derived from alignment at LSalAtl2s1689:12297..13160+ (Lepeophtheirus salmonis)
ATGCGTGTTCGAACCAGGGAAACTTATATGACCACACCAAAGGGCCTTAC
TTTCTTCCGTTGTGAATGGTCACATCCTATACTCAGAATTCGTGGCTTKG
TCTTTATTTCTCATGGCCTTGGTGAACACATGGGCTACTACTCAGATGTT
GCCGTCCACTTGGTCCGTCTTGGTTATATTGTCTTTGGCCATGATCATCC
TGGACATGGATATAGCTCAGACAGCAAGGAGGATATGTTCCGGGAGTGCA
TTGAATGTACTTTGTTTGATATCACTGTTACAACACAGAGCAAATATGGA
AATAAATATTCCCTCTTTATCATTGGTCATTCCATTGGGGCACTCATTGC
TCTCACAGCTTTAAAAAAGATGCCGGATCTTTTCTCAGGAGCTGTTCTTG
TAGCTCCTCCATTCAAGGGATTGTCGAAGCTATATTTTAAGCCTCTATTT
AATCTCCTTCTACCCTTCCTGAGTTACTTTTATCCTTCATATCAAATAGT
AAAAATGAGTTTAAATCAGCTCACGAGGGACGTTCATCAGGTCAAAAGAA
TGGAAAAGGATCCKCTTTATTCAAAACTTGGACTGAAGGCACGATCTACT
TATCTGATTCATCAAACAATCAAAACACTACAATCAAGGGCTCATGAAAT
CCAAGTTCCTCTCTTTATTCAACAAGGTGCATGTGATGGATTTACGGATC
CATTGAGTGCTCAGAGTCTCTTTGATTCTGTTGGATCAAGAAGGAAGCAT
ATCAAAATGTATGACGGAGCCTATCATCACCTATACATAGACATTCCGTC
GACGAAGAAAGAGGCTATTTCAGATGCTGTTACATGGATTTATTTTACTC
AAAAGTTTGCTTAA
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