EMLSAT00000002967, EMLSAT00000002967-698814 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002967
Unique NameEMLSAT00000002967-698814
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:1030725..1032950 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002967 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002967EMLSAG00000002967-685733Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013089EMLSAE00000013089-722017Lepeophtheirus salmonisexon
EMLSAE00000013090EMLSAE00000013090-722018Lepeophtheirus salmonisexon
EMLSAE00000013091EMLSAE00000013091-722019Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780289auto780289Lepeophtheirus salmonispolypeptide
EMLSAP00000002967EMLSAP00000002967Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002967

>EMLSAP00000002967 ID=EMLSAP00000002967|Name=EMLSAP00000002967|organism=Lepeophtheirus salmonis|type=polypeptide|length=700bp
MISKGSFKSPRPMSVCGDCGALGPSWASINRGILLCSDCCSVHRTLGRHV
SHIKALRQSNWIPEQLHMVQSLYANGANSIWEYSLLNPHKAXAPSSNPTS
KPQASDPLHPLKFEFIRAKHATLAFLYKPTGKDEFVXESELSRQLHSSVR
TSNLETSLRLLSQGADPNYYHPEKNSTPLMVAGRAGQAGQVELLLVYGAD
PGAVDKSGKSATDYAKTSGHNTLSQRIFSSQFELSDRLTYYLCQKRPEHI
SGQHFLIPESDRSQGEAHRIAKRKLQGLNNSVFEELAIDVYDEVDRRETD
SLWASNSNSPGNKSAIIPFLPVNPDYGTTRNQGRQKLARLNSLEFAGLVI
DVLKEVRRRQTELDNKWPLKAKTTPSQRIKSLAFGGDEEPIYDHVASDDD
YYQVPEDDEDELVEKELESCHNNNNANNLIKSKKDSISNISGGGPHLSGG
DYXKLKTQLESSELRVQHLIDSNDDMRSEIARLTTTVNKLILENKNLRVS
PIHSKFEDSRSLSMYESRSPPPPSSSSGVPQLNSYLSMNSSHTPRGNTSS
HYYGNDATYDEPTRSYSARYPSNYYDDTSGILPSQEEVVRRTEAITRCIQ
ELLITAKDEKFDAFIPCSERIVRAVTDMVVLFPDDMGNESMRSSLSSLTS
AAQNFERECGILVIRSQKEGPLSSSFVSQQVIQNAFDIAKSTKQLVAFFQ
back to top

mRNA from alignment at LSalAtl2s170:1030725..1032950-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002967-698814 ID=EMLSAT00000002967-698814|Name=EMLSAT00000002967|organism=Lepeophtheirus salmonis|type=mRNA|length=2226bp|location=Sequence derived from alignment at LSalAtl2s170:1030725..1032950- (Lepeophtheirus salmonis)
ATGATATCCAAAGGTTCTTTCAAGTCTCCCCGTCCCATGAGCGTGTGCGG
GGACTGCGGTGCACTGGGCCCCTCCTGGGCCTCCATCAACCGAGGCATTC
TTCTCTGTTCGGACTGTTGCTCCGTCCACCGGACTCTGGGACGACACGTC
TCGCATATTAAAGCACTGCGCCAAAGCAATTGGATCCCAGAACAACTCCA
CATGGTGCAATCCCTGTACGCCAATGGGGCCAACTCCATCTGGGAGTATT
CCCTCCTCAACCCCCACAAGGCGGKGGCCCCTTCATCCAATCCCACATCC
AAGCCCCAGGCCTCTGATCCTCTTCATCCCCTCAAGTTTGAATTCATCCG
TGCCAAACACGCCACTCTGGCCTTTCTCTATAAACCCACGGGAAAGGACG
AGTTCGTTYCGGAGTCCGAGCTGAGCCGGCAGCTCCATTCCAGTGTTCGC
ACTTCCAATCTGGAAACGAGTCTCCGGCTCCTTTCCCAAGGTGCGGATCC
CAATTATTACCACCCAGAAAAGAATTCCACACCTCTGATGGTAGGAAAGA
ATCCTTCCTTTCATATTTTAATCCAGGCTCAAATAATTAAGATTGTTGTT
GATAGGTTGCGGGGCGAGCTGGTCAAGCGGGACAAGTTGAGCTTCTCCTC
GTCTATGGAGCTGACCCTGGTGCTGTTGACAAGTCTGGAAAATCTGCGAC
GGACTATGCCAAGACATCTGGTCACAACACTCTCTCTCAACGGATTTTTT
CTTCACAATTTGAATTAAGTGATAGACTAACGTATTATTTGTGCCAGAAA
CGACCAGAGCATATCTCTGGTCAGCATTTTCTTATTCCTGAGTCTGATAG
ATCACAGGGAGAGGCTCATCGCATTGCCAAAAGAAAATTACAAGGTATTC
CAGCTTTCATTATTTTAATATTTAATATGTACGATTATTATTCATAATCT
AGGTCTGAACAATTCAGTATTTGAAGAGCTTGCCATTGATGTCTACGATG
AAGTTGATCGCCGTGAGACGGATAGTCTCTGGGCCTCTAATTCCAACTCT
CCTGGTAACAAATCCGCAATTATTCCTTTTTTGCCCGTCAACCCTGACTA
TGGTACGACACGAAACCAAGGGCGCCAAAAACTAGCCAGACTTAATAGTT
TAGAATTTGCGGGCCTTGTCATTGATGTTCTGAAGGAAGTTCGTCGTCGA
CAAACGGAGTTAGATAATAAATGGCCCCTTAAAGCCAAGACGACTCCAAG
TCAAAGGATAAAATCTCTTGCTTTTGGGGGAGATGAGGAACCAATTTATG
ATCATGTTGCGTCAGATGATGACTACTATCAAGTTCCCGAGGATGATGAG
GATGAATTAGTGGAGAAAGAGCTTGAATCATGCCATAACAACAATAATGC
TAATAATCTCATTAAATCAAAGAAGGACTCTATATCGAATATAAGTGGCG
GCGGCCCTCACCTCTCAGGTGGGGACTACAWCAAATTAAAAACTCAATTA
GAGAGTTCTGAACTTAGAGTTCAGCACCTCATAGACTCAAATGATGACAT
GAGATCCGAGATTGCTCGACTTACTACAACTGTGAATAAACTTATACTCG
AAAATAAAAACCTCCGAGTTTCTCCCATTCATTCAAAGTTTGAGGATTCG
CGATCACTTTCCATGTACGAGAGTCGCTCGCCACCACCCCCTTCGAGTTC
ATCCGGAGTTCCACAGTTAAATAGTTATCTATCAATGAATTCCTCTCATA
CTCCTCGGGGTAACACCTCTTCACACTACTACGGAAATGATGCCACATAT
GATGAACCTACTAGGAGTTACTCAGCAAGGTATCCTTCCAATTATTATGA
TGATACTTCGGGTATCCTACCTAGTCAGGAAGAAGTCGTCCGACGAACCG
AGGCAATCACGAGATGCATACAGGAACTCCTTATAACGGCCAAAGATGAA
AAATTTGACGCATTTATTCCTTGTTCTGAGCGAATAGTTCGTGCCGTAAC
GGATATGGTTGTTCTATTCCCAGACGACATGGGGAACGAGTCCATGAGGA
GTTCACTCAGTTCTCTCACATCCGCTGCTCAAAACTTTGAAAGAGAATGT
GGGATACTGGTCATAAGGTCTCAGAAAGAAGGACCCCTCTCCTCTTCCTT
CGTGTCCCAACAAGTGATTCAAAATGCATTCGACATAGCCAAATCCACCA
AACAATTGGTTGCTTTCTTTCAGTGA
back to top
Add to Basket