EMLSAT00000002978, EMLSAT00000002978-698825 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002978
Unique NameEMLSAT00000002978-698825
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:166204..168625 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002978 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002978EMLSAG00000002978-685744Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013128EMLSAE00000013128-722056Lepeophtheirus salmonisexon
EMLSAE00000013129EMLSAE00000013129-722057Lepeophtheirus salmonisexon
EMLSAE00000013130EMLSAE00000013130-722058Lepeophtheirus salmonisexon
EMLSAE00000013131EMLSAE00000013131-722059Lepeophtheirus salmonisexon
EMLSAE00000013132EMLSAE00000013132-722060Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773690auto773690Lepeophtheirus salmonispolypeptide
polypeptide-auto773691auto773691Lepeophtheirus salmonispolypeptide
EMLSAP00000002978EMLSAP00000002978Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002978

>EMLSAP00000002978 ID=EMLSAP00000002978|Name=EMLSAP00000002978|organism=Lepeophtheirus salmonis|type=polypeptide|length=168bp
MRSQQELRIVLFCALVLGTTSAYDHEDPYCLDKEDYCTADEWNCLHPQYY
HVCRRSCGCKRRGQCYDLFGDCVDFTNDCFNERRCDNLIRDEYCENNRNL
CNHPSILYLCARTCGRCRNDCRNKMLSNKVCNAFVKRRYCDTSSPFCWIM
RDVCHASCTSGCRHHHIH
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mRNA from alignment at LSalAtl2s170:166204..168625+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002978-698825 ID=EMLSAT00000002978-698825|Name=EMLSAT00000002978|organism=Lepeophtheirus salmonis|type=mRNA|length=2422bp|location=Sequence derived from alignment at LSalAtl2s170:166204..168625+ (Lepeophtheirus salmonis)
ATGAGAAGTCAACAGGAGTTAAGGATAGTTCTTTTCTGTGCATTGGTCTT AGGTACAACGTCGGCTTATGATCGTGAGTTAAATTTGAATACTTTATATC TTTAAGTTAACTTGTTGGATATGACTCAGATGAGGATCCTTATTGTCTCG ATAAGGAAGACTATTGTACCGCTGATGAATGGAATTGCTTACATCCACAA TACTATCACGTTTGCAGAAGATCCTGCGGGTGTAAACGACGTGAGTACAC TCAGATTTGGCAACTTAACTTTATTTTTGAATCCATATATTAGGAGGACA ATGCTATGATCTGTTTGGAGATTGTGTAGACTTTACAAATGACTGCTTCA ATGAACGACGTCGCCATTGTCCTAGATTCTGTGGCCTATGTACAGAAAGT AAGTCAACTCAATGAATTCCAATATCCACGGGGCCATAATCACCAGTTGC CAAGGGGGGCACAATAACTTTTTGGGTAGTAATATTTATTTACCCCAGTT ATGGTGAGACATACATTAGTAGAGTTGTATCAAATATGTCCTTAACGTGT GTGGGATTAACGTGGTAACTCTGCCCATTTAAGGAATGTTTGGGAGGAAA GTAGTGTGGCGGGCATGGCTTTTTTTTTTGATCAGGGTCAAGCACTCATG TGAGAAAAGGAATAAACAAAAACCAATTCCGTATTTAGCATGGACTTATT GGTTGGAATTACTCCGATGTCGATCTTCAATTCTACTCTGAGTCCAACAA GGACTTACACTTATAAATCCCAAGTAAATCCTTACTGCTACTCTCCGTTT TTCTTGAAAAAACGCACTAATTACTACTTTATTCTTATATATTCCCTTCT CAAGAATTAAATAATAATGATAGGAGCTTTGGGAAATAAAAACCTCTTTA GATTACCAACTCTGCGTGTGCTCATGAATGACAAAGAGAAACAATGAGTC TTTGCTCTAGTTTTGTAACTTATAAGTGTAAATCTTTGTTGAACTAAGAG TATAATTGATTATTGACATCGGAACAATTATTCCCTATTTCCTTGCTGTA TGCAGAGTGGGATTAGTGTGGGTTTTTTTAAGTTCCTTTAATTTGTAATA TGGAGTTGCTCTGATAAGTAAAGATTATAGTGATGTATTTACTCCATCTG ATCCAGGAATCTTCCTTGAAGTCCATATACAAACTGCATACATTCTTCTC TAGTTGCGTCTGAGTATCGAATCACTCAGATTGAGTTCAAGAGAATATTT TATCACGAGCGCGTTCTCCATTGAGCTACGTCGTTGTATTAATGTATTTT CACTCACGGGTTCTTGCAGATGATCCAATAAAACGTCAAGACAACAAACC TCATGTATATCGCTGACAAAGCTTCTCTTCTCCCAAATATTCTTATAAAT GTCAGGCTTACCATACCATTTTTCAGTTTTTTTATTTTTACAAACTGACA CCTCATATTTCATCAGGGGAGTTCGCGGAGCGTAGGTTGGAGGGGATGTA ACCCCTTCCCCAAAATTAAGGAATTTTTTCAGTTTACTAGTTGTTTTTTT TTCCAAATAATTTGATTTTTCGTGAAAAGCTATGGATTTTTGACATTTTT TGAAAAAAATTTAATATTTAAATTTTTTTTGTAAATGGCAGTGGAGTTTT GATGTTTTTTCCAAAAAAATTTCAATACTTTAATTGTGAATGTTTACAGA TTTTTGAAATTTTGTCCCACAAAATTTAACATTTTAATTTTATTTTCCAA AAAAATATAATTTTTTGTGAATAACTGGATTTTTCAAATATTTTTCCGAA TAATTATTTCCCAAAAGTATAATTTTTGTCAAAATTCCCAAAAACACAAA ATTATTATAAATAAAAATAATAATAATAATCCTGGGGATGATCCTGTTTA TACATTTCTAACCATAGCCATCCGATCAGAGCCCTAAACAACAAAACAGT GATTACAGCACTGATCAAAAATAATCTATTTACTAATTATTTCTAACTAT ACACAGGTTGTGATAATTTAATCAGAGATGAATACTGTGAAAATAATAGA AATCTTTGCAATCATCCCTCTATTCTTTATCTGTGTGCAAGAACTTGTGG AAGATGTAGAAGTGAGACATGGAATGATTCTATGTGATTATATACATTCA TTAATATTTATTTTTATCTATTATCCACAGATGACTGTCGAAATAAGATG CTAAGTAATAAGGTTTGTAATGCGTTTGTAAAACGTAGATATTGTGATAC TAGCAGTCCCTTTTGTTGGATCATGAGAGATGTATGCCATGCTTCATGTA CCAGTGGGTGTCGACACCATCACATACACTAAATAGAATGTAAATTCTTG TAAAAACTTGGGAATTCTAAATTCAATTTTGTTAAATAGTATAGAAATGA ACACAGAATATTTTAAGTTCTT
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