EMLSAT00000002979, EMLSAT00000002979-698826 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002979
Unique NameEMLSAT00000002979-698826
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:169356..170709 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002979 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002979EMLSAG00000002979-685745Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013133EMLSAE00000013133-722061Lepeophtheirus salmonisexon
EMLSAE00000013134EMLSAE00000013134-722062Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773766auto773766Lepeophtheirus salmonispolypeptide
EMLSAP00000002979EMLSAP00000002979Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002979

>EMLSAP00000002979 ID=EMLSAP00000002979|Name=EMLSAP00000002979|organism=Lepeophtheirus salmonis|type=polypeptide|length=275bp
MNRIDFNDLSNLPNFKGVRQVPRKNRAFSVIEKTNKVEDASRKRRGSVAY
IETVYLMVNLVDRTLSLDNLNYERIQLLGIASLYLTSKIEEYYPASVSDM
IKLSQNAYEKEEVFALEKELLQLHNFNVHGVEPMTFMNRLILSTNHSEDA
DFKETVILLYDTLLTCKHYSSLRCSLLSAGAVFGAVTLYGDKWTDSLVSC
SKYKESDLAVIAKKMLKNLYFMKTETSIPALNGVRRKYLSKSQHRDIINS
GRIDIPHLVCAIHAMSNKIKAPSTK
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mRNA from alignment at LSalAtl2s170:169356..170709+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002979-698826 ID=EMLSAT00000002979-698826|Name=EMLSAT00000002979|organism=Lepeophtheirus salmonis|type=mRNA|length=1354bp|location=Sequence derived from alignment at LSalAtl2s170:169356..170709+ (Lepeophtheirus salmonis)
GGGATCTATATAGTCTGGAAAATAAAACTATTTCTATGATTCCCTTTAAA
AGAGCGAATACTTTAATCAAATGAACAGGTTTATCAGTTATGAGCATAAG
CAATCAGGGTTTAAATCCTATAAAACTCTCAGTAATAAACAGTTGGAGAA
GGAGATACAATAGTTAAACGATGAATCGAATAGATTTTAACGATTTATCC
AATCTTCCGAACTTCAAAGGAGTTCGTCAGGTTCCTCGTAAGAATAGAGC
TTTTTCAGTTATTGAAAAAACTAACAAAGTTGAAGATGCATCCAGGAAGC
GAAGAGGATCCGTAGCTTATATAGGTAATGACTGATTATTGTGCCATTTT
ATTTGTATTCATCAACTTGTATTTCCCTAATAATATTATAGAAAATACGA
AAAAACCGCCTGAGAACATTCATAAAGAGCTGTCCAAAAAATTGATAAAG
CTAGATAGCATTACTTCAATCCCTCCTAAGACTGAAACAACTATCACTGA
TAAACAAAAATTGGGCATATATTATGAAGACAATATTTTTGAATATCTTC
TTAANTCGAGAAAAGAAATATATTGTCAACTATGAGGTTCTCACTCGAGG
TAACCCCAAGATTGTGGAATGTCGAGCACTAGCCATTGATTGGCTAYTGM
TGGMTGSTCKTAAAKTGTTCATMTCTCKAGAAACTGTCTATCTCATGGTA
AACCTCGTTGATAGAACTTTGTCTCTTGATAATCTCAATTACGAAAGGAT
TCAGCTTCTGGGAATTGCATCTCTGTACCTTACTTCTAAAATAGAAGAGT
ATTATCCTGCAAGTGTTAGTGACATGATCAAACTGTCTCAAAATGCATAT
GAAAAAGAAGAAGTGTTTGCATTAGAAAAAGAACTTCTTCAGCTTCACAA
CTTTAACGTCCATGGTGTCGAGCCCATGACTTTTATGAATCGACTTATTC
TTTCGACAAATCACTCTGAGGATGCAGACTTTAAGGAAACGGTCATACTT
CTTTACGATACCCTTTTAACGTGTAAGCATTACTCTTCCTTAAGGTGCTC
TCTGCTTTCAGCTGGGGCTGTTTTTGGTGCTGTAACTTTATACGGTGACA
AATGGACAGACTCGCTTGTCTCTTGCTCCAAATATAAAGAGTCAGATTTG
GCTGTTATAGCTAAAAAAATGTTGAAAAATTTATATTTCATGAAAACTGA
GACGAGTATACCGGCTCTGAACGGAGTCAGAAGAAAGTATCTGAGCAAGT
CTCAACATAGGGATATAATTAATTCGGGTAGAATTGATATTCCTCATCTA
GTCTGTGCCATTCATGCAATGTCGAACAAAATCAAGGCACCGAGTACCAA
ATGA
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