EMLSAT00000002984, EMLSAT00000002984-698831 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002984
Unique Name	EMLSAT00000002984-698831
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s170	supercontig	LSalAtl2s170:293100..297855 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002984 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002984	EMLSAG00000002984-685750	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000013143	EMLSAE00000013143-722071	Lepeophtheirus salmonis	exon
EMLSAE00000013144	EMLSAE00000013144-722072	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775969	auto775969	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002984	EMLSAP00000002984	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s170:293100..297855-

protein sequence of EMLSAP00000002984

>EMLSAP00000002984 ID=EMLSAP00000002984|Name=EMLSAP00000002984|organism=Lepeophtheirus salmonis|type=polypeptide|length=196bp
DEDYIQDKFNLTGLNEQVPHYRQALDLILDLESDEDLDDNPNQSDLIEQA
AEMLYGLIHARYILTNRGIAQMIEKYQSGDFGHCPRVYCENQPMLPIGLS
DIPGEAMVKLYCPKCMDVYNPKSSRHHHTDGSYFGTGFPHMLFMVHPEYR
PKRPASQFVPRLYGFKIHQLAYQIQQQAAANFKTPLRALSYNNAKR

mRNA from alignment at LSalAtl2s170:293100..297855-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002984-698831 ID=EMLSAT00000002984-698831|Name=EMLSAT00000002984|organism=Lepeophtheirus salmonis|type=mRNA|length=4756bp|location=Sequence derived from alignment at LSalAtl2s170:293100..297855- (Lepeophtheirus salmonis)
GACGAGGACTATATCCAAGACAAATTTAACCTCACGGGCTTAAATGAGCA
GGTCCCTCATTATAGACAAGCCTTGGATTTAATCCTAGACTTGGAGTCGG
ATGAGGATTTAGACGACAATCCCAATCAATCGGATCTGATTGAACAAGCT
GCAGAAATGCTCTATGGTCTCATACACGCCCGATACATTCTCACCAATCG
AGGGATCGCTCAAATGATTGAAAAATACCAATCCGGGGACTTTGGACACT
GTCCCAGAGTTTATTGTGAAAATCAGGTATACGCATTGCAAGGCAAAGAA
GGTTTTGAGCCGCTTCCTCTCAAGGGGATTCTCGAGGATTTTACCCTCAT
GTCCATATCTATAATATCATTATCCACTTCCCTATTTACAACCCCCTCAT
CTCCTAATTCCCCCTCTTATATATGTGACCACACAAAAGCATGCTAGAAT
CAGGGATCTCCAAATGGAATCCCCATTACATTATTGAGTGACTCAAAAGT
AGATCGTCTGATATTTAAGGATCATGTTTAAAATCAGAGAAAAGACCCAC
TTCCTTTCAAGATTCAGATTCATTAGAATAATACATTGACCCACGTCTAT
TTATGTCCACTTCCATAATTACAGCTACTACCGTCATGTCCAAATCCCGC
CCCTTAAAGTTGAATCCTCATTACATTTATCCAGGGTTGAGAGCATCATG
TTCGTAACTCAAAAATGAAATATTTGTCATTCTAGTAGTCTTAATATTTA
GGCGATGTTTACATCGCAATTGAAATACTTTATTAAGATTGCTCCTCTTC
TTACTCAGTTAAACAGGGTTATCTTGATTTCAAGATATATTCTTGTATCA
ATCATAAAATCTTTTTTATTGTTTGAGACCTGCTCTGAGAATTTTGCAAA
GCAGGGAGTTGGATTGGGTGGTACATATGTCAAATGGTAATGTATTTGTC
CTGAGGCCCTTGTTTTATGACCGTAAATGTGGGCCGTCAACACTTTGTGT
TCATATTTAAAAGCTGAGAAAACAATCGAACTTTTTAAATGAATCTCTTA
GTTCCATTTTATTATGAAAATAGGAAAACATCATAATGAAATAATTGAGT
TTTCAAATTCCAAAGCTTATTTCTGTTAATTAAAAATTGTCGTAATGCCC
TCCCCCACACACAATTTGTATTCCTTTATATACAAGTCATTGTCAATCTA
TATCGATAAATTAATATTATGAACCCATTAGGTCTACCGCAAATTCCACT
CTCAAGTAGCAACAATTGAAGTCACAATAAAAGAAGGATAAATTGACAGA
TTTTATGTATTTAAAGGCCTCCAGAGGGACATGTATCAGTTTCTCAAATA
TTAGTTTAGCTAAAATTCTTGTGTATCTAAAATCATCCGATTATTTTGAA
TAATATGCCCCTATAACTGACTAAAATATATGTAGAGCTATTTCAGGTGA
TATTTTTCTCTAATGACCCGACTTTCCTTGTCTCTAATCGATCAAAACTT
TAAAAAAAATCTACAAATCTAACCATTTTCGGGATTTTGATTATACTCAA
ATATCAGTGTTTTATCATTGGCATTAAATAGTATTGAATGCAGGTGTCAA
GTCTATTTATTCATAAAGACATTTGATGGAGTTTGATCAAGGGTTATTGT
AAATGAGTCTCCTTCAATTATGATGCAATTTATGCAGTCAATGAAAATGC
TCAATTTGGATTCTCTCGTGATTTTTGTTCAAGATTTTTTATATGTTAAC
GCCCTGCACTTTACAAATCAGTGAAAATGATTAAATAATAACAGTTTTTA
ATTATTCATAATGGAATTTGGTGTGATTTAATCAATCACCATTTGGACAT
ATGCAATTGTCTCTATACTAAATAATATGTTTGAACACCTCTGTGCATTT
TTTTTATTTTTGAAACACCTCTATTTCAATACCTGATATCCCCTGGTCCT
CCTCCCTATTCATTTGTATCCATATTGATGCTAATATACCTTCTTTTTTT
GCTCCTGGGAAAATTAAATTGATTTCCTGTCGTTCAATACTCATACCTAC
TTATAGAGTGTCTCCAAAAGGTAGATATCTGTATTGTTATATTTTCGTAG
AAAGGTTTAGCATATTATTATTATTTTTTGCAACGGAAATACCTGAGTTA
AAATATGTGGTGCGTCCATACATCCTCTGACGAAAGAGTTATCATATATA
TAAAGTACATCAATATATTTATTATTACATTATTTTGTAGCAATGGTGCA
TGGCAAAAAACCTTTTAAAAAATAATACTTCACAAAAACTTTTTATTTTA
TTTTAATTACTTTTAACAGTTATTTAATATATGTGATTTTTCAACATAAA
AACAATCTTGATATTAGTGCTAAGGAAACAATCCCTATTTATAATTATTA
TACCACATATATGTATACATATAACTCAGTATTTCTGGGTTATTATACAA
ATAACTAGGATGAGTGAAGATACCTAAGAATTTTAGCTATAATTGTAAAT
CTTTATTTAATGTGTAAGACTTATATTGGCCACAATTTCTCCCTTTTCAA
ATAAAATCTTTTCATTTTTTTAAGTTAACGATCAATTTTAATTGTACTTC
AAGTTTAATTTGAACACACCCAAAGGGTCCATAATAATAATAATTTGTAC
GCAGAAATTGAAGATAATTCGATTCCGGATGGAACGGAATTTTAAATAAA
TTGTTAAACCCGAGGAGTTGTCCCAAACATCTCCATAACCCATTGAGAGT
TCTTTATCAGCGGACCAGTAAATGTACACTCCAGTTTTGATAATTTATAC
ACTAGATCCCACTTATACATATTCAATATTTTATAGATATATTTGAGTGA
AATATAGGAATATTATTCAAATTGAAGGATGAGTTAAAATAGTAAATAAT
TTACGCTTTAGTTGTGATCCTTTATTCGATATAAGATACTTATATATTGG
CCTCGATATTGCCCCTTTCAAATATAATCAATCAATTTCTCATTCTTTTA
TTGTGATTGAAATTGACTTCATTTTGAGAAAAATAATTCTAGCTCTATAA
AATGGCTTTCTATTCATCATTGCGTTGTTTTTTAACAATGGCGACAGTTA
AAATGTATTTAAAAATGAAACAAAACAAAACCATAAAATTATATTTTAAA
TACTTTTAACATTACGTCACATTATGTCACATAAAAAAACCTCGAACTTA
CATCGAGAAAAGGAAAAAATCCAAATTTATTATTTCATTTCATATTTACG
TACAATCTAATATTTCAGTCAATTAGTCTTTTTATTCAAATTACTAGAAA
TTGTTAAGAATCTGTATGAATTTACGTTTTAAATCTTCATTTGATATAAG
AGTCTTATATATTGTCCTGAAACAATTTGTTTTTCAAATAGAATTTATCA
ATTTTGAATTCTTTTATTCTGAGCTCAAGATTGGCTACCCAATCGGTTTA
ATAAGAACAATTTGTTCATAGATATTTACTTCATTTTAAATAAATTATCA
TTCTGACTTGCTTCTATATTAACGATCCACATATATTATCCATATCTAAA
GATGTATCTGATAGATTACACATCATTTTAATTGTCAAAATGTTGTCATT
GACTCACATATATCTTGTTGTAAAACAAAGGGATTGTAAGGTGTGATTCA
ATTTGGATTTTTTTGATAAAGACTGTTGTTATTATTTAGAAAGTGTTTTT
TTATGATGTAGTTTAATATTTGTGGCCCGTCAACAAAAAAAAAACTATAA
TAATTTTTCTCATAATTGAGTGTGGATTACATTTGTATTCTTATACGAAT
AATCGTCAATTTTTATCGACAAATTATTATTAATAATCCTTTGGATGTGC
GTCAAATTGCATTTGAAGTAACCAAATTCAATTGTCACAATAATTAATAG
CTTTTATTTGGAAGGGGTCATAGCGTGGCCAATATAAGGTAATGAAGCTA
TACTTAAAACTCAGGGTTAAATTCAATCATCCCACAAATTTAAATATAAT
GAACTCAAATATATTTATGAAATATTGCCCTATATGAAGTAAATTAAGCT
TAGGATTTTTCCTCCTCTACTTAATTTTTGCCAAAGATTGTTTTCATGTT
GACGTGCATTTGTATAGTGTTGTTCATAGTGGACGTACATATTATTATTA
TGATCAGTATGTATTTGGCACAATATTAGGTGCATCTACTGTCATCTACC
TTCAGATGATTGGAAGACTCTTTGATGGTCGTTCTTCTGCAAATAATATC
TATCGATGTTGCTTGTATGAAGAGCTCGCAATTCAATATTATTAGTCAAG
TCAGAGATTTGTTTTTATTATTAGTCAGTTTATTTATTATTAAAAAAAAA
AATGTTGATGGGCAAGGAGAAGAGTTGCTTGGAATTCCTTATTTGTTCAG
AATCATAAACTTATTTATTTATTTTTTTAACTATTTTTTAGCCCATGTTA
CCCATCGGATTGAGCGACATTCCTGGAGAAGCAATGGTTAAGCTTTACTG
TCCCAAATGTATGGATGTATATAATCCCAAAAGCTCACGTCATCATCACA
CTGATGGTTCATATTTTGGTACAGGTTTCCCGCACATGTTATTTATGGTT
CATCCAGAGTATCGTCCCAAAAGACCAGCAAGTCAATTTGTTCCGCGATT
ATATGGCTTTAAAATACATCAGTTAGCATATCAGATTCAACAACAGGCAG
CAGCCAATTTTAAAACACCTCTGAGAGCATTGAGTTATAACAATGCAAAA
CGTTAG

Add to Basket

Search form