EMLSAT00000002992, EMLSAT00000002992-698839 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002992
Unique NameEMLSAT00000002992-698839
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:487213..488268 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002992 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002992EMLSAG00000002992-685758Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013164EMLSAE00000013164-722092Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778093auto778093Lepeophtheirus salmonispolypeptide
EMLSAP00000002992EMLSAP00000002992Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002992

>EMLSAP00000002992 ID=EMLSAP00000002992|Name=EMLSAP00000002992|organism=Lepeophtheirus salmonis|type=polypeptide|length=351bp
MSEIDNHLSKKYXVHKRLGKGAYGIVWKAKSRRSGRIVAIKKIFDAFRNR
TDAQRTFREIIFLKEFNNHPNIIRLLNVHKADNDRDLYLVFEYMSTDLHH
VIRKGNILRDIHKEYIMYQLFQATSYIHSGNVIHRDQKPSNILLDSECRC
KIADFGLARSLSSTELEENQDCLTDYVATRWYRAPEILLGYQKYTKGVDM
WSLGCILGEMIIGKPLFPGKSTMDQIEHIARLLGNSQLLKLKKICSSQTA
QLVGKMISKHSVSKWSSTIKEKYPEGIDLLQKLLLVTPDDRITAPEAIKH
KYVTKFYNKKHDYHLNYDVVPPFNDNVQLSVDQYRRKLYDIIKGDKTNQG
M
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mRNA from alignment at LSalAtl2s170:487213..488268-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002992-698839 ID=EMLSAT00000002992-698839|Name=EMLSAT00000002992|organism=Lepeophtheirus salmonis|type=mRNA|length=1056bp|location=Sequence derived from alignment at LSalAtl2s170:487213..488268- (Lepeophtheirus salmonis)
ATGAGCGAGATCGACAATCACTTATCCAAGAAATATGMCGTCCATAAAAG
ACTCGGTAAAGGAGCCTATGGGATTGTATGGAAGGCCAAGTCTCGACGCT
CAGGAAGGATCGTTGCTATTAAAAAGATATTCGATGCCTTTCGTAATCGA
ACGGATGCTCAAAGAACCTTCCGAGAAATTATATTCCTCAAAGAGTTCAA
CAATCACCCAAACATCATTCGMCTCCTCAATGTTCACAAAGCAGACAATG
ACCGCGACTTGTATCTTGTCTTTGAGTACATGAGTACGGATCTACATCAC
GTTATTCGAAAAGGAAATATCCTTAGGGACATTCACAAGGAGTACATCAT
GTATCAGCTGTTTCAAGCCACATCATATATCCACTCTGGTAATGTGATTC
ATAGGGATCAAAAGCCGAGTAATATCCTGTTGGACTCTGAGTGTCGATGT
AAGATTGCGGACTTTGGTCTTGCACGCTCATTGAGTTCCACTGAGCTGGA
AGAGAATCAAGATTGCCTGACAGACTACGTTGCCACGCGTTGGTATCGAG
CACCTGAGATCCTACTAGGATATCAAAAGTACACAAAGGGAGTTGACATG
TGGAGTCTTGGCTGTATACTTGGAGAAATGATAATTGGAAAGCCTCTTTT
TCCAGGAAAATCCACCATGGATCAAATTGAGCACATTGCAAGGCTCCTCG
GAAACTCTCAATTACTCAAACTTAAGAAAATTTGCTCATCTCAAACTGCT
CAGCTTGTTGGAAAAATGATATCCAAGCACTCCGTTTCCAAATGGAGCTC
AACTATCAAAGAAAAATACCCTGAGGGCATTGATCTTCTACAAAAACTCT
TATTGGTGACTCCGGACGATCGGATCACCGCTCCTGAGGCTATAAAACAT
AAATACGTTACAAAGTTTTATAATAAAAAACATGACTACCACCTCAACTA
CGATGTCGTYCCGCCATTCAATGACAATGTTCAGCTCTCGGTGGATCAGT
ATCGACGTAAATTATATGATATCATTAAAGGTGACAAAACAAACCAAGGG
ATGTGA
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