EMLSAT00000003009, EMLSAT00000003009-698856 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003009
Unique NameEMLSAT00000003009-698856
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
F235 EMLSAG00000003009 female
  1. Adult
  2. Adult
 -Missing-
-Missing- 		14.12.2015 - 11:02
25.01.2016 - 10:03
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:853996..854817 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003009 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003009EMLSAG00000003009-685775Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013219EMLSAE00000013219-722147Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779915auto779915Lepeophtheirus salmonispolypeptide
EMLSAP00000003009EMLSAP00000003009Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003009

>EMLSAP00000003009 ID=EMLSAP00000003009|Name=EMLSAP00000003009|organism=Lepeophtheirus salmonis|type=polypeptide|length=273bp
MSILKNSPIRDPSPKYKCLEEDSLDAVFVLNNGPEDFIRTPSSRGRSREL
LHNAFKVXIYTFXFXAFILIAVKXWNTTTGIILEKESXXXXXXXXXXXXX
XXXXXXXXXXXXXXXSILRDFKPIITDMKSKEKPSQCHMKPDPGPCRSLL
PQFYYDFETGRCKSFYYGGCQGNANRFDNEENCLSICSSEEKKKGRENKG
NVCKLKADPGPCRALFQRYFFDSEKKVCVEFGYGGCQGNENNFVKKSDCE
DVCVKNDPGLVQVDPPTKDKNIE
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mRNA from alignment at LSalAtl2s170:853996..854817+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003009-698856 ID=EMLSAT00000003009-698856|Name=EMLSAT00000003009|organism=Lepeophtheirus salmonis|type=mRNA|length=822bp|location=Sequence derived from alignment at LSalAtl2s170:853996..854817+ (Lepeophtheirus salmonis)
ATGAGTATACTAAAAAATTCTCCTATCCGTGATCCTTCACCCAAATACAA
ATGTCTTGAGGAGGATAGTCTCGACGCAGTTTTTGTTCTCAACAATGGAC
CCGAGGACTTCATTAGAACACCATCTTCCCGAGGGCGTTCTCGCGAGCTA
TTGCACAATGCCTTTAAAGTTCNCATATACACTTTTCNGTTTGSAGCCTT
TATTCTCATTGCTGTCAAGTKCTGGAATACCACAACCGGGATAATACTGG
AAAAAGAGTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCAT
ATTGAGAGACTTCAAACCAATCATCACTGACATGAAGAGTAAGGAAAAAC
CCTCGCAATGTCATATGAAGCCAGATCCTGGACCCTGTCGATCCCTCTTG
CCTCAGTTCTACTATGACTTTGAGACAGGGAGATGTAAATCATTCTACTA
TGGAGGATGTCAAGGGAACGCTAATCGTTTTGACAATGAAGAAAATTGTT
TAAGTATTTGCTCTTCTGAAGAAAAAAAGAAGGGGAGAGAGAACAAAGGG
AATGTCTGCAAATTGAAGGCTGATCCTGGGCCATGTCGAGCATTATTTCA
ACGCTATTTCTTTGACTCTGAAAAGAAGGTTTGTGTGGAGTTTGGTTATG
GAGGTTGTCAAGGGAATGAAAATAATTTTGTTAAGAAATCAGACTGTGAA
GATGTTTGTGTTAAAAATGATCCTGGTTTGGTTCAAGTGGATCCTCCAAC
TAAAGATAAAAATATAGAATAA
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