EMLSAT00000003024, EMLSAT00000003024-698871 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003024
Unique NameEMLSAT00000003024-698871
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s171supercontigLSalAtl2s171:494274..495861 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003024 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003024EMLSAG00000003024-685790Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013256EMLSAE00000013256-722184Lepeophtheirus salmonisexon
EMLSAE00000013257EMLSAE00000013257-722185Lepeophtheirus salmonisexon
EMLSAE00000013258EMLSAE00000013258-722186Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778159auto778159Lepeophtheirus salmonispolypeptide
EMLSAP00000003024EMLSAP00000003024Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003024

>EMLSAP00000003024 ID=EMLSAP00000003024|Name=EMLSAP00000003024|organism=Lepeophtheirus salmonis|type=polypeptide|length=232bp
MATPSNPGSSESAKMIGSSFSLVRYNNPVLIDKHPTPTHSPTESSNSEKS
KTETEELLDSILPPREWEEEGQLWRQSEQLDQKLQQRQARETGICQVRRE
LYAQCFDELIRQCTINCMERGLLLLRVRDELRMTLHAYQTLYESSIAFGI
RKALQAEQGKADMESNISILEDEKMELERKVADLKHNCEIIEKRAAEQKL
ADEKNHAEEINFLKRTNQQLKAQLEGIISQKK
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mRNA from alignment at LSalAtl2s171:494274..495861+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003024-698871 ID=EMLSAT00000003024-698871|Name=EMLSAT00000003024|organism=Lepeophtheirus salmonis|type=mRNA|length=1588bp|location=Sequence derived from alignment at LSalAtl2s171:494274..495861+ (Lepeophtheirus salmonis)
ATGGCAACTCCAAGCAATCCAGGCTCTAGCGAATCCGCCAAAATGATTGG
CTCTTCCTTCTCCCTCGTCCGCTACAACAATCCTGTACTCATTGACAAGC
ATCCCACTCCAACTCATAGTCCTACCGAATCAAGTAACTCAGAAAAGAGT
AAAACTGAGACCGAAGAACTCCTGGACTCAATTCTTCCTCCTCGGGAATG
GGAAGAAGAGGGTCAGCTCTGGAGACAGTCTGTCTCTTCAACCCCTGCTA
CAAGACTGGATGTCATCAACCTACAGGTATAACGATTAAATTATATTTAT
ATTTTACATTGTGTAGAAGTTGGGATATTGTACAAGTTGCAATTTGTACG
TCTTATAACCGTTTATTGATTTATGATAGAAACTGTTTAAAAAATTATTA
TCATTCTCTATTAATTGATGCTATCTTTTAGTATAAGAGTGAAGGAACCT
TGAAACCTGTGGTTATCTTATGGCCTACATAATACCTATGAATTAATAAT
TTTCAACTGAAAAGTCAAAAGTTTTCTCGGTGACAAATAATTAAAAAGGT
TATTCTAATATTTTGGTCGAAACAAGCTGTTTGTATACGTTATTTCTTGT
ACAATAGCCCAATTTGTATGCACCATACGAATGTCAATCATTACTGTTTA
TATGTACCCTTTAGGAGCAATTAGATCAAAAGTTACAACAGCGTCAGGCA
CGAGAAACAGGGATTTGTCAAGTCCGAAGAGAGCTCTATGCCCAATGCTT
TGATGAACTAATACGTCAATGCACCATCAATTGTATGGAGCGTGGACTCC
TTCTTCTCCGTGTACGCGATGAACTCCGTATGACACTTCACGCCTATCAG
ACTCTCTATGAATCCAGCATTGCCTTTGGGATACGAAAAGCCTTACAAGC
AGAGCAGGTAGATCCATTGGGGGGTTGTTCACTTCAAGAGATGAAGAAAT
GTCAAGTATGTGTATGTTTCTTAGGGTAAAGCGGATATGGAATCGAATAT
CTCCATCCTTGAGGATGAAAAAATGGAGTTGGAGCGAAAGGTAGCGGATT
TAAAGCATAATTGTGAGATTATTGAGAAGAGAGCCGCGGAACAAAAGTTG
GCAGATGAGAAGAACCATGCCGAGGAAATTAATTTCCTCAAGAGAACGAA
TCAACAACTCAAGGCTCAACTGGAGGGAATCATTTCGCAGAAGAAATAAT
GATTTCCGCTCTACTATGACTGACTGATACATTTGGACATATGATATGAA
TAGGGGTTTGAGAAGAGCTGTGTTATTTGTCATCATCTCCTATAAGCTAG
GGGTGGTGTTTATCTGATATAAATGTATTTATTTGTATATACAACATAGT
AGAAAGACATTGTTTCTACATATATCCAGACAGAGCAAGGGAAAACTTGT
ATTCTTTATGTTAGTGGTTGAATACATAGCTATATGTATTTTTAACACCT
ATTTATGTATTTTAAAGAATAACATAAATGTTTTCATACTTCTTCAATAT
CATTTTTCAAATCCTTTTTAAAATAAAATTGACAGCTGGAAACGAAATAT
ATATTATGTTATTATATAGAAATATAGTTGAATGAATG
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