EMLSAT00000003033, EMLSAT00000003033-698880 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003033
Unique NameEMLSAT00000003033-698880
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1723supercontigLSalAtl2s1723:18166..21364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003033 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003033EMLSAG00000003033-685799Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013291EMLSAE00000013291-722219Lepeophtheirus salmonisexon
EMLSAE00000013292EMLSAE00000013292-722220Lepeophtheirus salmonisexon
EMLSAE00000013293EMLSAE00000013293-722221Lepeophtheirus salmonisexon
EMLSAE00000013294EMLSAE00000013294-722222Lepeophtheirus salmonisexon
EMLSAE00000013295EMLSAE00000013295-722223Lepeophtheirus salmonisexon
EMLSAE00000013296EMLSAE00000013296-722224Lepeophtheirus salmonisexon
EMLSAE00000013297EMLSAE00000013297-722225Lepeophtheirus salmonisexon
EMLSAE00000013298EMLSAE00000013298-722226Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769330auto769330Lepeophtheirus salmonispolypeptide
EMLSAP00000003033EMLSAP00000003033Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003033

>EMLSAP00000003033 ID=EMLSAP00000003033|Name=EMLSAP00000003033|organism=Lepeophtheirus salmonis|type=polypeptide|length=361bp
MEFADLIKVSRVLKILHRSIDSIERKNKSTIIIKCKDLQNNTIIPNQDEF
NDVVDTLEKLSAIDDLTRSYPFFYNPNFKQIEDGWSLFQPEEEFSKLVHS
NNKEWRISYVNSDFSTFLVRCSQPLSGPNNRRCKEDEKIFAVILNLSRPH
SYGGRKGYIIDTRTSAASQNSYSKLMDAITEKXASAEKWLNKLTVSSWLT
HVKEILNCACLIAQCLEKENASVVVHGSEGMDVTLCVTSLAQIILNPDCR
TVRGQFEALVVREWIQAGHPIWSRTTKGPFNDSLATKSKNHAPTFTIFLD
SVWQIYHQFPCSFEFTEKFLILLADHAYFSNFGTFLADCEKLPESFVLNQ
MLNNLAFSRTC
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mRNA from alignment at LSalAtl2s1723:18166..21364+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003033-698880 ID=EMLSAT00000003033-698880|Name=EMLSAT00000003033|organism=Lepeophtheirus salmonis|type=mRNA|length=3199bp|location=Sequence derived from alignment at LSalAtl2s1723:18166..21364+ (Lepeophtheirus salmonis)
ATGGAGTTTGCAGATCTTATCAAAGTATCTCGTGTTCTCAAAGTAATTTT
GCATCGACCATTTGTTTGCCCCTCAGAAATGACGTTATGTATCACGGGGC
ATCATTTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTATTATCTG
GTACATGAATGTAAAAGTAATTGAGAAATCAAACACTACAAACAAAACCC
TATAAAGCTCCATGTTATATTTCTCATAATTTTTTCACATGAGTATTTGA
TTAGACCTCTTTTCTGAACGATTTGCTGGATTGCACTGTTCTTGTAAGTT
ATATCATATTTAAATACAATCCTAGATTCTCCACCGAAGCATTGACTCAA
TTGAAAGAAAAAATAAAAGCACCATCATAATTAAGTGTAAGGATCTACAA
AATAATACAAGTAGTTATCCCAAATCAAGATGAGTTCAATGATGTTGTAG
ATACATTGGAAAAATTATCGGCTATAGGTATAACAAGTTCTCAGTTATTG
TCATCCACTAATTAACTTTCAACTTATTTTAAACTCATATATATGTATAT
GTCTCTTATTAAAATGAAGATGATTTGACACGGAGTTACCCCTTCTTTTA
TAATCCAAATTTCAAACAAATTGAAGATGGTTGGAGCCTCTTTCAACCCG
AAGAAGAGTTCTCAAAATTAGTTCATTCAAACAACAAGGAATGGAGAATT
TCTTATGTTAATTCTGACTTTTCAGTGAGTCAATAAATAATTAATTATAT
AAATTTATAGTACATATTTGAACAAAAATACTGCATGCATCTATTTTGTT
TCAAATAAGGTGAGTTAACAAAAAAAAAAATCTAGAAGAAAAATCTCGAG
AAGAATAAATATCCAACTTTTTTCTTTTTTTTACATCGTACATCCCATTA
TTTCATTAACATATTTTTTCAATTATGAGTATTATATTAGAATTTATTGG
ATGAAGGAAGGTACCTCAGAATATTAATTATAGTTCAAAACCTTCATTTA
ATTTTTTATGACTTCATTTGCTCCAGATATGGCCTTTCAAATATGATCTA
TCAATTTCCAATTGGTTCATTGGGAGGATGAATTTTTGAGGGTTAATCAT
GATAATTTATCGAAGATTACTAATGTAATCAAGAGTCTATTTTGTAAAAA
ATCATTCTAGCTTGCTTTTGAGTTAATGGTTCAAAAATTTCACATTTGTA
GTACTCTTTCTTGAAATACGTATCATAATTCGAAATTAATATACATATCT
ATAGGTTTGCAGAACTTACCCTAGAGCTGTTGTTGTTCCAGCATGTATAT
CAGATGGCTGTCTGCGTGCTTCCGCCCGTTATCGACAGGAGGGGAGYTTT
CCAACATTGAGCTATCGACATGCAAATGGAGTAATTAATTCATATAAATA
TAAACATCAAGATAATTTACTAAACTCAAAATCTTTTATTGTTTCAGACT
TTTTTAGTAAGATGTAGTCAACCTTTATCGGGTCCGAACAATAGGCGTTG
TAAGGAAGATGAAAAAATATTTGCTGTGATTTTAAACTTATCGAGGCCTC
ATTCATATGGTGGAAGAAAAGGCTACATAATAGATACACGAACATCTGCT
GCCTCACAAAGTGCCAAATCCAAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTGGAAGCGTATC
AATAAATCAATAGATAGATTTCATTATTTATTAGACTCTTATTCGAAATT
AATGGATGCAATAACAGAGAAAAGWGCATCCGCTGAAAAATGGTTAAACA
AACTCACTGTGTCTAGTTGGCTAACTCATGTGAAAGAAATATTGAACTGT
GCTTGCCTCATTGCCCAATGTCTAGAAAAAGAAAATGCATCTGTGGTTGT
TCATGGTTCTGAAGGAATGGATGTTACACTATGTGTTACATCCTTGGCGC
AAATTATTTTAAATCCAGACTGCCGAACAGTTAGAGGGCAGTTTTTAATA
TGATTATTAAAGTTATTGCCATATAAATTAACTTTGATATTTTATTTTAG
ATTTGAAGCGCTTGTGGTTCGAGAGTGGATTCAAGCTGGACATCCAATAT
GGTCCAGAACAACGAAAGGMCCTTTTAATGACTCCTTAGCGACAAAATCA
AAAAATCATGCTCCGACTTTTACAATATTTCTCGACTCTGTATGGCAAAT
TTATCATCAGTTTCCGTGTTCATTTGAATTTACTGAAAAATTCCTAATTT
TACTAGCTGATCACGCATATTTCTCAAATTTTGGTACATTTCTAGCTGAT
TGCGAGTGTGKAAGMTCRATTTTWGATTTGAAAAATAAAACGGTTAGTCT
TTGGTCTTATGTAAATCGACCTGAAATCATAGAAAATTACCTGAATCCTT
TGTATTGAACCAAATGTTGAATAATTTGGCCTTCAGTCGCACCTGTTAG
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