EMLSAT00000003034, EMLSAT00000003034-698881 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003034
Unique NameEMLSAT00000003034-698881
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1723supercontigLSalAtl2s1723:22498..25427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003034 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003034EMLSAG00000003034-685800Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013299EMLSAE00000013299-722227Lepeophtheirus salmonisexon
EMLSAE00000013300EMLSAE00000013300-722228Lepeophtheirus salmonisexon
EMLSAE00000013301EMLSAE00000013301-722229Lepeophtheirus salmonisexon
EMLSAE00000013302EMLSAE00000013302-722230Lepeophtheirus salmonisexon
EMLSAE00000013303EMLSAE00000013303-722231Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769548auto769548Lepeophtheirus salmonispolypeptide
EMLSAP00000003034EMLSAP00000003034Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003034

>EMLSAP00000003034 ID=EMLSAP00000003034|Name=EMLSAP00000003034|organism=Lepeophtheirus salmonis|type=polypeptide|length=639bp
MLLLTLRKPWNCRFLNYIATETVKNSKGNSYKLRRTNEKFEYYYKRLCPQ
EEWDEALHAMRQPLPLSFRFTSSSPQSFLLSLFENKFGSNLKRVPWYEPF
GYAWQIQGIHRWNLDSDAEIQKNILREWDLGHLYRQELVSMVPVHFLDIQ
PHHRVLDMCASPGSKTTQALEYLGNDGFLIANEFNKIRVTNLIGNLHKFS
SSNAHLTLSEDGRYFPDIVMKDSSILQFDRIVCDVPCSGDGTIRKNPNVW
LNWHPARGNERHHLQYSIAARSIELLKPGGIMVYSSCAMNPIENEAVISR
LLRDFEGDIFIINPPNAIALNYAQGTWIAFCDVMECQLVHKRSLSKKLIF
FDGVIIKNGVTLNDRITFLIKEDETSKEFMTRVRQGKEKLRVGDIIKFTG
SFENENYFIVSDYQFIQRWDNSIKGTFKSVPPKVKEDKAPKVPEIDSESK
HKRARIFANWIEETYSFLDNKKDLILDVAGGKGDLSFELSVRKDFKSHVV
DPRFDPRNREESYKKWQKKIAKKTGRKIPKSFNTWFDQNFFIKNRDWILE
NVKLIVGLHPDEATDSIVDLCLENNINFAIAPCCVFATQNPHRKLTNGTT
PNTYELYLEYLQQKSIQNIQVVDLKFGGRNTILYTNHFK
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mRNA from alignment at LSalAtl2s1723:22498..25427-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003034-698881 ID=EMLSAT00000003034-698881|Name=EMLSAT00000003034|organism=Lepeophtheirus salmonis|type=mRNA|length=2930bp|location=Sequence derived from alignment at LSalAtl2s1723:22498..25427- (Lepeophtheirus salmonis)
ATGCTGCTATTAACTTTAAGAAAACCATGGAATTGTCGGTTTTTAAATTA
TATTGCGACGGAGACTGTAAAGAATTCGAAAGGAAATAGTTATAAGCTCC
GTAGGACAAATGAAAAATTTGAGTATTATTATAAAAGACTGTGTCCACAA
GAGGAATGGGATGAGGCACTCCATGCGATGCGACAACCTTTGCCTCTGTC
CTTTCGATTTACCTCTTCGTCACCACAATCTTTTCTATTATCACTCTTTG
AAAATAAATTTGGATCTAATCTAAAGAGAGTCCCTTGGTAATACAATTTC
GTCTAATGCATTATTTATTAATGATTTATGACTTCATAAGTATAACTTAT
AATATATTTAATTGCAGGTATGAACCTTTTGGATATGCATGGCAAATTCA
AGGAATACATCGTTGGAACTTGGACTCCGATGCAGAAATTCAGAAGAATA
TACTTCGAGAGTGGGATTTGGGTCATTTATACCGACAAGAGTTAGTTAGT
ATGGTGCCCGTTCATTTTTTAGATATACAACCTCACCACCGTGTCTTGGA
TATGTGTGCTAGTCCTGGATCAAAGACAACTCAGGCATTAGAATATCTTG
GGAATGATGGGTTTTTAATTGCAAATGAATTTAATAAAATACGCGTTACG
AATCTTATCGGAAATCTCCATAAGTTTTCTTCCTCTAACGCACATCTCAC
ATTATCAGAAGATGGAAGATATTTCCCAGACATTGTGATGAAAGATTCAT
CCATTCTTCAATTTGATAGAATAGTATGTGATGTACCTTGTTCTGGTGAC
GGAACAATAAGAAAAAATCCAAATGTTTGGTTAAATTGGCATCCTGCTAG
AGGAAATGAAAGACACCATTTACAATATAGCATCGCTGCTCGAAGTATTG
AGTTATTGAAACCTGGGGGAATTATGGTATATTCATCTTGCGCTATGAAT
CCAATTGAAAATGAAGCTGTTATCAGTAGACTTTTACGAGATTTTGAAGG
GGATATATTCATTATAAATCCTCCAAATGCAATTGCATTAAATTATGCAC
AAGGGTTTGTAAGTTGGGATGTTTTTGATAAACAAATGAACATCCACAAG
GAATATTTATCAGGAAATAATAATGGCCAAATTTCGCCACATTTATTTCC
TCCAAAAGAAGACTGGATCAGGGAACAACTCCTAAAGACTATGAGATTTC
AGCCTCATTTTAATGATGACGGTGGCTTTTTCGTTGCTTATATAAAAAAG
AAAAATGATTCCTTGAAAAAAATATCGAACAGAAAAAAATCAAAATCTTA
AACGCTCTAAGAATATGTTACTTCCAAAAACCATTGGGTCAGATATATTT
AAAGTTAAGAAGACCTTAGACTTATTAGGAATTTGTCACGTCGAGCTTGA
AGGATTTTTTCAATATACAAGTCAATACTGTTCGAAAAAGATACGCTCAA
CTTCTAAAGAACTCTTAGATATATGCCAACATAATCCGCATTTAAACATA
GCTGGTATTGGTAACGTGGTTCTAAAAGAAGAATCTCGAATTAGTTCACC
TCTCACTCACAAATTTCCAACTTCTTACATCCATAATCCTCTTAAAAAAA
AATTACAAAAAGAACTATGTATATTTCCTTAGTTGATTTTAAAAAATTAC
TCAAATCAGAATATTTGAGTTCTGATGAATTTCCAAGAGCAGAGGAAGGA
CTTATTATATTTGTAATTAACAATGATAATGATGGAAATAAAGTGGAAAG
TTGTTTAGGATATATTGGAACCTCAAGAATTAGTTTAAATATAACTCCTT
CTATGCGAGAACACTTTTGTCTAAAATATACAGCATTCTAATTTATATTT
GCTTTCAGTACTTGGATAGCATTTTGTGATGTTATGGAATGTCAATTGGT
TCATAAACGTTCTTTAAGCAAGAAATTAATATTTTTTGATGGGGTTATAA
TTAAAAATGGAGTAACGTTGAACGATCGTATTACTTTCCTAATCAAAGAA
GATGAAACTTCTAAAGAGTTTATGACTCGAGGTAAGACTTTTAAATTTAG
AATGTAAGAATAATCATTTATTTCGTATTCGTTGTTTCCTCAAGTACGCC
AAGGGAAGGAGAAACTAAGAGTTGGAGACATTATCAAATTCACTGGTAGC
TTTGAGAATGAAAATTATTTTATTGTAAGCGACTATCAGTTTATACAAAG
ATGGGATAACTCGATAAAAGGAACATTTAAATCAGTTCCACCCAAAGTAA
AAGAGGACAAAGCACCGAAAGTCCCAGAGATAGATAGTGAATCTAAGCAT
AAGAGAGCTAGAATTTTTGCCAATTGGATTGAAGAAACATATTCCTTTCT
TGACAACAAAAAAGACTTAATATTAGATGTTGCCGGCGGAAAAGGGGATT
TAAGTTTCGAATTAAGTGTAAGAAAGGATTTCAAATCCCATGTAGTTGAC
CCGAGATTTGATCCTAGAAATAGGGAAGAGTCGTATAAAAAATGGCAAAA
AAAGATTGCTAAAAAAACAGGTCGAAAAATACCTAAGTCTTTTAATACAT
GGTTTGACCAGAACTTTTTCATCAAAAATCGGGACTGGATTCTTGAGAAT
GTTAAATTGATAGTGGGTAATGTAACGATTACATCCATTTAAAAAACATT
ACATATGTCATTAGTTTCTTCTATCTTAGGATTACATCCTGATGAAGCAA
CGGATAGTATCGTAGATTTATGTCTTGAAAATAATATCAACTTTGCTATA
GCTCCATGCTGTGTCTTTGCTACTCAAAATCCTCATCGAAAACTTACAAA
TGGAACAACTCCGAATACATATGAGTTATATTTAGAATACCTTCAGCAAA
AAAGTATTCAAAACATTCAAGTTGTCGATTTAAAGTTTGGAGGAAGAAAT
ACCATACTATATACGAATCATTTTAAGTAA
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