EMLSAT00000003058, EMLSAT00000003058-698905 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003058
Unique NameEMLSAT00000003058-698905
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s17314supercontigLSalAtl2s17314:133..683 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003058 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003058EMLSAG00000003058-685824Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013410EMLSAE00000013410-722338Lepeophtheirus salmonisexon
EMLSAE00000013411EMLSAE00000013411-722339Lepeophtheirus salmonisexon
EMLSAE00000013412EMLSAE00000013412-722340Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767832auto767832Lepeophtheirus salmonispolypeptide
EMLSAP00000003058EMLSAP00000003058Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003058

>EMLSAP00000003058 ID=EMLSAP00000003058|Name=EMLSAP00000003058|organism=Lepeophtheirus salmonis|type=polypeptide|length=144bp
MRRDPLNESDINLFCADWRNGTIYPDYGQGAANTQIAGKIIAIFFNNVSE
IFEPIRPKLHLVGFSFGAQVCSFAGSNIKNCSRITGLDPAGPSFREHNTS
FRLDKSDADFVDVIHTNGHVDFYPFGGETQPYCNNLFEEFLCKF
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mRNA from alignment at LSalAtl2s17314:133..683-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003058-698905 ID=EMLSAT00000003058-698905|Name=EMLSAT00000003058|organism=Lepeophtheirus salmonis|type=mRNA|length=551bp|location=Sequence derived from alignment at LSalAtl2s17314:133..683- (Lepeophtheirus salmonis)
ATGAGACGCGATCCTCTAAATGAAGTAAGTTCTTCCTAAAGATTAGACAA
GCCATACAAATAACATCAAAAATGTATAGTCTGACATAAACTTATTCTGT
GCAGATTGGAGAAATGGAACGATATATCCAGATTACGGTCAGGGTGCAGC
CAATACACAAATAGCTGGAAAAATTATTGCAATTTTCTTTAATAATGTCA
GTGAAATATTTGAGCCCATCAGACCTAAGCTACATTTAGTTGGCTTTAGT
TTTGGAGCACAAGTCTGTTCATTTGCCGGATCTAATATTAAGAACTGTAG
CCGGATCACAGGTAGGTTCTTTTTTATATATGTATTATATACATGAATAA
CGCATAATTTTTGCGAAAGTAGGACTGGACCCCGCTGGACCCTCATTCAG
AGAGCATAATACATCTTTTAGATTGGATAAATCTGATGCAGATTTTGTTG
ATGTTATACACACAAACGGTCACGTTGACTTTTATCCTTTTGGAGGAGAA
ACTCAACCATATTGTAACAATTTATTTGAGGAATTTTTATGTAAGTTTTA
A
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