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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1734 | supercontig | LSalAtl2s1734:14347..19068 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003059 >EMLSAP00000003059 ID=EMLSAP00000003059|Name=EMLSAP00000003059|organism=Lepeophtheirus salmonis|type=polypeptide|length=1132bp
MMAELNEEKGNRFRVESVNQISLNGAGGDPSGGDDNFSENGSIDDSISYK
NYLAYELNRSSNPGGGGGGDRRRPSVTISVPENEKPSPSSRRLSRKRSSF
QFTTQRSLRHYLTREAIPHADHYRNKMSFAKGKPDSSRPTLDDLLNDDPY
SKDNSDLESQTDDQDTGSVIKFGWIEGVYMRCLLNIWGVMLFLRLTWVIG
QAGLLEGLAIITLSNIVTVITSISMSAVSTNGQIKAGGIYFMISRSLGPE
FGGAIGLMFTLANSIAVAMYIIGFCEALSDMLKQYIPGFIGILNTPEDGL
HDIRLIGSVSLVLLLGLAIVGMEWVTRVQKGLLVLLLFSQLDFIIGSFLP
PSEDKLAKGFVGYNGTVLMENLFSEYIPNEGTEKNNSFFTVFAVFFPAVT
GIVAGANLSGDLKDPGVAIPKGTLLXIVSTYVTYTIYGVMIAAXTXREAS
GDVLELDYVNETIKEVNNITNSFWECENRTCSYGILHSQQMMEVISAWGP
LIYAGCFAATLSSAIASLVGAPRVFQAVAKDKLFPGIASFADGWGKNNDP
VKGYLLVFLISLICILIGDLNYVSSLLSNFFVAAYALINFSVFHASITKS
PGWRPGFKYYNKWISLLGTVLCICVMFLMDMVTALVTFIIVFFLYMYVSI
RKPEVNWGSSTQAQSFMTALNSVLSLTKVEDHVKNYRPKIMVMSGSPLNR
PTLIDFANLVTKRISLLESVDVVPEDLDWKKSQAIKNSGQNWFTENHIKG
FFSVVRNSKISEGARTAMELSGLGKLRTNMILLGFQDTWWKKDESAKEYY
KIIQTAFDLRLAVGVLRINGGLDVTSMTNLMEDSSPNQSNALNYDDRCES
NMSVDSGLDLATKSGAKNTSTQSGEDDKEDGSLKRNKKPNGFEKLLFKKK
CPSSIPLPPSEKDVKPLDEDIVNRLSQFRDKTTVNTGTIDVYWLYDDGXX
XXHILQTRAKYSKCKMRVFFLSNKNDELDGQTRSMASLLAKFRIDFQDVI
MLTDATKQPKKETKDEFKAMLANNSLKNSNSGKKLSTSSRDSSSSECDEV
PPLVSELDIIANKEKTNFNLRIAEIVKDNSSSADLIVMTLPMPKKEIVPQ
ELYMAWLDYTTKDMPPFLLVRGNQTSVLTFYS back to topmRNA from alignment at LSalAtl2s1734:14347..19068+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003059-698906 ID=EMLSAT00000003059-698906|Name=EMLSAT00000003059|organism=Lepeophtheirus salmonis|type=mRNA|length=4722bp|location=Sequence derived from alignment at LSalAtl2s1734:14347..19068+ (Lepeophtheirus salmonis)
CATCAATTACTTATAGTTTTTACTTCATCTAATCAACATAAAAAAGTTTT
ACTAATATTCATCTTCTACTTGAAGGCGCTCACTGACAAGTCCACATAGT
CATTTGTGTTGAATAAGACTCAGTTCTTGAGAGCGGAAAGGGATAAAGTG
TGATATTTGATCTGAAAAACGAACAAAAAATTGTCATTAACTTATTTTTA
TCATATAATCACTTCGTGTAGAATGATCTTTTAATAGATTTCTACTTATT
TCAACTACTTACTTTTAACTCTGTTATCACATCTCTCAAGTAACAAAGGA
ATCAAAAGATATACTCATCATATTTAAATGATGGCAGAGCTCAATGAAGA
AAAAGGCAATCGATTTCGAGTTGAGTCGGTTAATCAAATTTCCCTCAATG
GTGCTGGAGGTGATCCCTCTGGAGGAGACGATAACTTCTCTGAAAATGGT
TCAATTGACGACTCTATTTCTTACAAAAACTATCTTGCCTATGAATTAAA
CAGATCATCCAACCCTGGCGGAGGAGGAGGAGGTGATAGACGAAGACCTT
CTGTTACAATTTCTGTTCCAGAAAATGAAAAACCCTCTCCCTCATCCCGA
AGACTCTCACGTAAAAGATCTTCTTTTCAATTCACTACACAAAGAAGCTT
ACGACACTATTTGACTCGGGAGGCCATTCCACATGCGGACCACTACCGGA
ATAAAATGTCATTTGCTAAAGGTAAGGAACTCATACTACACAATATTAGA
GTATCCTACAAAGTCCCAATATCAGTAAAAATAATAAATGGTAAAAAACC
AAGTTTCCCAAATCATATTAAATCCTCTTCATTATTACAAAAAAAATAGT
AACAATGATCCTTAATTCATGCATAAATGATATATAATTATATATCATTT
TATGTATTTGTCAAAAAACCTGAAATATGGAACAGTTAAAATATATTTTT
TATAGAAGTCTCAAAAATTAGAAGTTGTTATTTTGATATGTTTGTTAAAA
GCAGTTGAGGGGGGGGGGGGCTAATTATATCGTTGGGCTATTTGTAGATG
AAGTAAATTTATATACCATGTACAATAAAATAGAATATATATGGACATGT
TTAGTAAATAAATGATCAACCTCCCACACGTTTCAAATGCAAAAATAATC
ATATATATAAAAACCAACATTCTCTTGAAGTAATTTATCCCCTCAATTGT
CGTGTTTGCTTCCAAATCATTTAATCAATTGTATTTATAGAGGAGGGTAG
GAAGATATTATGCAGATTTGATCATGATATCCTATTATTAAAACTAACTG
CTTCTCCATAATCCACCTCTAAAATAACTTAATAGAAAATAGGCTGCTCG
AAAGTATATGTTATTATATATTTTATCAGTTGGGATATTACGAAAGACGT
GATCATATTTCTCAATCTGAGAGAGTGCACCTTTATTGTACCAAAGTACT
ATTCATGCAGGCTAAATACCTTTTCTTCCTTTATGCGTATTTTTCCATCC
TTAATACTTCTTATTTCTCATAAAGACGTTGAGAAGGCGGACTGCAGTAA
ATATTACCTATATTATTCCAAAAGAGTATGCAAGTACGTTTTTCTTTCGG
CTCATTAAACGTGATTCTACTACTCATTTTTCTCAATTAATCTCATGTAA
TGTCGATACTAAAACCTTGTTTTAATCGTTATTTTATAACTTAATGTTAT
CCCTTGATTTTTTTCAGGTAAACCTGATAGCTCACGTCCAACTTTGGATG
ATCTCCTCAACGATGATCCCTATAGTAAAGACAACAGTGATTTGGAATCT
CAAACTGACGATCAAGATACAGGAAGTGTTATAAAGTTTGGATGGATCGA
AGGAGTATACATGCGATGTCTTCTCAATATTTGGGGAGTGATGTTATTTC
TGCGTTTGACTTGGGTTATTGGTCAAGCTGGTCTCTTAGAGGGTCTGGCT
ATCATCACACTCTCCAACATTGTAACCGTTATAACATCTATTTCCATGAG
TGCAGTGTCCACAAATGGGCAGATCAAGGCTGGAGGAATTTACTTTATGA
TATCAAGGTCCCTTGGTCCGGAGTTTGGAGGGGCTATAGGCCTTATGTTT
ACTCTTGCTAATTCAATTGCTGTAGCCATGTATATAATTGGTTTTTGTGA
GGCTCTCTCGGATATGTTGAAACAGTATATTCCGGGTTTTATTGGGATAC
TTAATACTCCTGAGGATGGCCTTCATGACATTCGACTAATTGGAAGTGTG
AGTCTGGTGCTTCTTTTAGGTCTTGCAATTGTAGGAATGGAATGGGTGAC
CCGAGTTCAGAAGGGTCTTTTGGTACTACTCCTATTTTCTCAACTGGATT
TTATCATTGGTAGTTTTTTGCCTCCAAGTGAGGACAAGTTGGCAAAAGGC
TTTGTTGGCTATAATGGAACAGTTCTAATGGAAAATCTATTCTCAGAATA
TATTCCAAACGAAGGAACGGAGAAAAACAATTCCTTCTTTACTGTTTTTG
CTGTTTTCTTCCCAGCAGTGACAGGGATCGTAGCAGGAGCTAATCTCAGT
GGAGATTTGAAGGATCCAGGAGTTGCTATTCCAAAAGGTACTCTTTTGSC
CATTGTATCAACCTACGTCACTTATACCATCTATGGAGTCATGATTGCGG
CTTKCACTTTWCGAGAAGCATCGGGAGACGTATTGGAACTCGATTACGTG
AATGAAACCATCAAAGAAGTCAACAATATCACAAACTCTTTCTGGGAATG
TGAGAATAGAACGTGCAGCTACGGCATTCTCCACTCTCAGCAAATGATGG
AAGTTATTTCTGCATGGGGACCACTTATTTATGCTGGTTGTTTCGCTGCC
ACTCTTAGTTCTGCCATTGCGTCTCTTGTTGGTGCTCCTCGTGTATTTCA
AGCCGTTGCAAAGGATAAGCTATTCCCCGGGATCGCTTCCTTTGCTGATG
GATGGGGAAAGAACAACGATCCTGTAAAAGGATACCTTCTTGTATTTCTG
ATTTCATTGATTTGCATTTTGATTGGAGACTTAAATTATGTTTCTAGCTT
GCTCTCAAATTTCTTTGTGGCAGCATATGCCTTGATCAACTTTTCTGTAT
TTCATGCATCCATTACTAAGAGTCCCGGATGGAGACCTGGATTTAAGTAC
TATAATAAATGGATATCACTATTGGGAACAGTTCTCTGTATTTGTGTTAT
GTTTTTGATGGATATGGTCACAGCACTTGTGACATTTATTATCGTTTTCT
TTTTATATATGTACGTATCTATACGAAAACCCGAAGTTAATTGGGGATCC
TCAACACAAGCCCAGAGTTTCATGACAGCTTTAAACTCAGTTCTTAGTCT
GACTAAAGTAGAAGATCACGTCAAAAATTATAGACCCAAAATAATGGTGA
TGAGTGGATCCCCTTTAAATAGACCAACGCTGATTGATTTTGCCAATTTG
GTTACAAAGAGAATATCTCTCTTGGAATCTGTTGATGTCGTTCCTGAAGA
CTTGGACTGGAAGAAATCCCAAGCCATCAAAAATAGTGGCCAAAATTGGT
TTACGGAAAATCACATTAAGGGATTTTTCTCGGTTGTAAGAAACAGCAAA
ATAAGCGAAGGAGCGAGAACAGCAATGGAACTCAGTGGATTAGGAAAACT
CCGAACTAACATGATTCTATTGGGCTTTCAAGACACCTGGTGGAAAAAGG
ATGAGAGCGCTAAAGAATATTATAAAATCATTCAAACTGCATTTGATTTG
AGACTTGCTGTTGGCGTTTTGAGGATTAATGGTGGATTAGATGTGACTTC
TATGACAAATTTGATGGAAGATTCCAGTCCAAATCAAAGTAATGCTCTTA
ATTACGATGATAGATGTGAGTCAAATATGTCTGTTGATTCTGGACTTGAT
TTGGCGACAAAGTCTGGAGCCAAAAATACCTCGACGCAATCTGGGGAGGA
TGACAAAGAAGACGGATCTTTGAAGAGAAATAAGAAGCCTAATGGTTTTG
AAAAGTTACTTTTCAAGAAAAAATGTCCTTCATCAATTCCATTGCCTCCA
TCAGAGAAGGATGTAAAACCCTTGGATGAAGACATTGTGAATCGATTAAG
CCAATTCAGGGATAAAACAACTGTCAACACGGGCACGATTGATGTATACT
GGCTCTATGATGATGGTNNNNNNNNNNNCCATATTCTTCAAACCAGAGCA
AAATACTCCAAGTGCAAAATGAGGGTATTCTTCTTGAGCAACAAAAATGA
CGAATTGGACGGGCAAACAAGGAGTATGGCATCACTATTAGCTAAATTCA
GAATTGATTTCCAAGACGTTATCATGCTCACAGATGCTACCAAGCAGCCA
AAAAAGGAAACGAAGGATGAGTTCAAAGCTATGTTGGCCAACAACTCCTT
AAAGAACAGCAACAGCGGAAAGAAGCTTTCCACATCAAGTCGAGACTCAT
CATCTTCCGAATGTGATGAAGTCCCACCCCTCGTATCCGAATTGGATATT
ATAGCAAACAAAGAAAAAACCAACTTCAATCTACGAATTGCTGAAATTGT
CAAGGATAACTCAAGCTCGGCTGATCTTATCGTCATGACTCTTCCCATGC
CTAAAAAAGAAATCGTTCCTCAAGAACTTTACATGGCCTGGCTTGACTAC
ACCACAAAAGACATGCCACCATTCCTGCTCGTAAGGGGAAATCAAACTTC
TGTTCTCACATTTTACTCGTAA back to top
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