EMLSAT00000003067, EMLSAT00000003067-698914 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003067
Unique NameEMLSAT00000003067-698914
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1739supercontigLSalAtl2s1739:29725..30837 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003067 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003067EMLSAG00000003067-685833Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013448EMLSAE00000013448-722376Lepeophtheirus salmonisexon
EMLSAE00000013449EMLSAE00000013449-722377Lepeophtheirus salmonisexon
EMLSAE00000013450EMLSAE00000013450-722378Lepeophtheirus salmonisexon
EMLSAE00000013451EMLSAE00000013451-722379Lepeophtheirus salmonisexon
EMLSAE00000013452EMLSAE00000013452-722380Lepeophtheirus salmonisexon
EMLSAE00000013453EMLSAE00000013453-722381Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769864auto769864Lepeophtheirus salmonispolypeptide
EMLSAP00000003067EMLSAP00000003067Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003067

>EMLSAP00000003067 ID=EMLSAP00000003067|Name=EMLSAP00000003067|organism=Lepeophtheirus salmonis|type=polypeptide|length=122bp
MKSLLVLLILFQLDSSFAKRNRACTTALGIRCIFPFIYKGQRYSSCTNVD
SRNGRFWCPIFLNRDGVFPERSLNFGYCRRNCLRQKRPDQILTPTSFATT
VDINSITDMKIATNGRTPPPPK
back to top

mRNA from alignment at LSalAtl2s1739:29725..30837-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003067-698914 ID=EMLSAT00000003067-698914|Name=EMLSAT00000003067|organism=Lepeophtheirus salmonis|type=mRNA|length=1113bp|location=Sequence derived from alignment at LSalAtl2s1739:29725..30837- (Lepeophtheirus salmonis)
ATGAAGTCTCTTCTTGTTCTGTTAATTCTTTTTCAGTTAGACTCTAGTTT
TGCAAAAAGAAATCGAGGTAAGATTTGTCAAAATATGTTCCTTGTTGAAA
TAATTACTTCTACCTACAACTTTTTAAGCTTGCACAACGGCATTAGGCAT
CAGATGTATCTTTCCATTTATTTATAAGGGGCAAAGATATTCAAGTTGCA
CAAATGTTGATTCAAGAAATGGTCGTTTTTGGTGTCCAATTTTCCTTAAC
AGGGATGGAGTTTTTCCTGAAAGGAGCCTTAATTTTGGTTATTGCAGAAG
AAATTGTTTAAGTAATTATTTTTAATCCCAATAAAAAGCTTAACCTAATA
TATATATATATATTTTTTCAAACGTTAGGACAAAAACGCCCCGATCAAAG
TAAGTAATTAAATATTCTCAGGATTTAATTAATATTATGTCGATTAATTA
ACTTGAATTTATAGCCACAACAACAACACGACCTAACTAGGGGGGAGGGG
GTTTAAAATCAAATTCAATTTAAGTACAACTTTTCGGATACAAAAGGATC
TTTTAGGCAATCTGGAATAAAAATTAATTTCCCTCCTTAAAAAAAACGGA
AAACCCCCAAAACACCCATGAATATGTATTTTATCAATCTTTTTCTAAGA
AATAAGAAGAAACTCGCAAATGTCGTAATCATTAAAGTCTTTAATGTTAA
AAGCAATAGTTATATACCATATTTAGTTTATAAAGRACAGTTTTAAGGTT
ACTTAAAAGTCAAAGACCCCAAAAAAGGTCAATTTTTTCTAATTTTTTAT
TTAGTCTGAATTTTTTGACTTCTGTTAATCAATGGTTTTAGATTAATAAT
ATCTTCCTTTTTTTTTTTTTTATTCAGTATTAACACCTACGTCCTTTGCA
ACGACTGGTAAGTTTTATTATTTATTAAATTCTTGAATCAGTTTTAAAAC
TATTTTGTTTTCTTTTAAATTTCCTACAGTGGATATAAATTCAATTACAG
ATATGAAAATTGGTAAGAACCTTTTAGAGATAACTCGTATTCTATTATTT
AATTAATTTTAACTTGTATTCTACAATTCAGCAACAAATGGAAGAACTCC
MCCACCCCCGAAA
back to top
Add to Basket