EMLSAT00000003080, EMLSAT00000003080-698927 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003080
Unique NameEMLSAT00000003080-698927
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s173supercontigLSalAtl2s173:1480394..1481405 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003080 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003080EMLSAG00000003080-685846Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013508EMLSAE00000013508-722436Lepeophtheirus salmonisexon
EMLSAE00000013509EMLSAE00000013509-722437Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780781auto780781Lepeophtheirus salmonispolypeptide
EMLSAP00000003080EMLSAP00000003080Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003080

>EMLSAP00000003080 ID=EMLSAP00000003080|Name=EMLSAP00000003080|organism=Lepeophtheirus salmonis|type=polypeptide|length=317bp
MSWDNYNGQDYYGSHDPNEQYAGYEDPQQQGYDPNYYGAPGAGYYNPNDY
YATQQQQQQQHTSNAPLGPGQVGEFLQSNPMISGMAMAYGQEFVGKGSAE
IQKNWDKYINLEVLRYYFAVDTAYVASKLRIILFPFTKSNWAKSFSEEGG
PVMPKCDVNATDLYIPLMSYVTYILVSGYISGLMNAFTPDGLATTAYSAL
LWLLLEMGIFYFSSFIFNIPSDLSKWDVLAYSSYKYVGVVLLCLIGLIGS
RLIYYLSLIYTSIAVMVFLARSLKRRINPERGGVGGSNXAGKMYILLFIT
GVQPFFLWWFTFSYVMV
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mRNA from alignment at LSalAtl2s173:1480394..1481405-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003080-698927 ID=EMLSAT00000003080-698927|Name=EMLSAT00000003080|organism=Lepeophtheirus salmonis|type=mRNA|length=1012bp|location=Sequence derived from alignment at LSalAtl2s173:1480394..1481405- (Lepeophtheirus salmonis)
ATGTCTTGGGACAATTATAATGGTCAGGATTACTACGGATCCCATGATCC
AAATGAGCAGTATGCGGGGTATGAAGATCCTCAACAACAAGGATATGATC
CCAATTATTACGGGGCTCCAGGTGCTGGTTACTACAATCCCAATGATTAC
TATGCGACGCAACAGCAGCAGCAACAACAAGTGAGACTCGGAAGAGGTTC
CAAAGTAGTCCTTTAGCTAATAATATGTTTACTTGTAGCATACTTCGAAC
GCTCCATTAGGTCCCGGTCAAGTGGGAGAATTTTTGCAATCCAACCCAAT
GATATCTGGGATGGCCATGGCTTATGGTCAGGAGTTTGTGGGCAAAGGCA
GTGCTGAAATACAAAAGAATTGGGATAAGTACATTAATTTGGAGGTTTTA
CGCTATTACTTCGCAGTGGATACGGCCTATGTAGCCTCCAAGCTTCGTAT
TATTCTTTTTCCATTTACCAAATCTAACTGGGCCAAGTCCTTTTCCGAAG
AGGGAGGCCCTGTTATGCCTAAATGTGATGTTAACGCCACCGATCTATAT
ATACCATTAATGTCCTATGTTACCTATATCCTTGTATCTGGATACATCAG
TGGTCTCATGAATGCTTTTACTCCAGATGGACTCGCTACAACGGCGTATT
CAGCCCTTCTCTGGCTTCTTCTCGAAATGGGGATTTTTTATTTCTCCTCT
TTTATCTTCAACATTCCTTCGGACTTGTCTAAATGGGATGTTTTAGCATA
TAGCTCTTACAAATATGTTGGAGTCGTACTTCTCTGTCTAATAGGACTTA
TTGGCTCCAGACTCATTTATTATCTATCACTGATCTACACATCCATTGCA
GTCATGGTCTTTTTAGCTCGGAGTTTGAAACGACGGATAAATCCTGAGCG
TGGGGGGGTTGGAGGATCTAATKCAGCCGGCAAAATGTATATCCTTCTCT
TTATAACCGGAGTGCAACCCTTCTTCCTCTGGTGGTTCACGTTCTCGTAT
GTTATGGTTTAA
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