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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s174 | supercontig | LSalAtl2s174:459498..464707 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003108 >EMLSAP00000003108 ID=EMLSAP00000003108|Name=EMLSAP00000003108|organism=Lepeophtheirus salmonis|type=polypeptide|length=431bp
MIPKSFNLKWSSHFPNMEKVFANLVKSESLAXVTLYTANGQMFRAHRFVL
SSCSDFLRNVFLENPSEQPVVHLPEVESETIKLLLDFIYTGELLVDDDVL
LMKIMDTSNMLFIKGIHSALEEKQKKNNSTMLNVETIGNKRKTRSPRQYI
SSSPPTNGLVTEEEPRDLSSRKIHNESDILKDRKENLSNIMEEGALCNND
YEVPNPSKLMCLDESVGQAWASNHQVFSSLLSKVEADPLHISAVPRVKQE
QMQPPFPQHPPVNLTTDHINNILNTSSLPICPLCGKDCANFPNLRTHLQT
HNNSKPFACDFCDSKFTRASHLNRHRRSHTGEKPFECSICGKLFGRQDKL
KVHVDRHRIREQKELKAANGGVGARQTMSQQNKGSNXQPQQHHTNNWNVN
ATFPSQVSPFPTYYDTIPKTQHNTLMPSFMG back to topmRNA from alignment at LSalAtl2s174:459498..464707+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003108-698955 ID=EMLSAT00000003108-698955|Name=EMLSAT00000003108|organism=Lepeophtheirus salmonis|type=mRNA|length=5210bp|location=Sequence derived from alignment at LSalAtl2s174:459498..464707+ (Lepeophtheirus salmonis)
AAAAAATAAAAATTATTATTCTCAGTCATCTTCTCATCTTGGAGGGCCTT
GGACGACGCGAGTTGTCTTCCCACAGTACTCTCACATATAGTGAACTTTT
CTTCGTCATCGTTTCTTTAAGCGAGTAGTTAGTGCTGCATTGTTTTTTCC
CTACTTCTTCAAACATGATTCCGAAATCCTTTAATTTAAAGTGGTCAAGT
CATTTTCCAAATATGGAAAAGGTCTTTGCAAACCTCGTGAAATCTGAAAG
TCTCGCGGKCGTGACGCTGTACACTGCCAATGGGCAAATGTTTAGAGCAC
ATCGATTCGTTCTATCATCCTGCTCGGATTTCCTTCGTGTAAGTTTGTTG
TGTGACGTAACTCCATCACTGTGTTCAGTGCCGCTTTGAACAAGACATCC
CCTTATTTATGTTCATCCTATCCTGATTTAGTCGGATCAAACCTGCAAAT
ATATCTCCATCAATATAGAAATAAATGTACTTTGGGATTTCATTTTGACT
CCTTGATTTTTTTGCAGAAATGGAGCTACAAAGTTGGTCAATTAGGATCT
CACTAAATAATGTCTGTTTGTAGTGTACAATCTCGTTGTTGTTTTTTTCA
TCTCTGCATAATATCCGACAATCTGTGAATTTTAAATGAATCAAATCAGA
TTTATTGTAAAGTTATATAATGTGCGTCAACATAAAAACAGTCGTGAACA
AAAATCCAGAAAAATATAAAATCCCAATACATATGAACATACGCCCCAAT
ATTTCATAGACATGTGTAACTCAATTATAGGGCTATTATTCAAATATATG
GGATATGATAAGATAGCCAAGAATGTTAGCTACCTATAGTTGTGAACCTT
TATTTGATTTAAGAGACTTAATCTCCAATATCACCCCCTCCCCCCTTACA
ACCATAAAATCTTTCAATTTGTCATTCTTTTATAATGACGATCAAATTTG
TTGATATAAATTGAGGATAATTCGGGGAAGAATATACACTCCATTTTAAG
AAAAATCATTATAGATTGCTTATATGTTGGTGGGCCACATTTTCAAGAAT
CCTGGCAAGACTAGATTTGATATGAAGGTGGGGATTACCGTAATCGGGAA
ACATTTTACACTTCCTTTCACATTCTACTTGAGCTAGGAGAGAAGAAAGT
ATTATAATTTATATATTTTTTCATTCCTTTCCATCAAGAGTACGAATCGA
TTCTTCCTGATCAGATGGAAGTACATTTTTGAAGTAGATGAGTGTCTAAT
TTAGTTAGCCGATATTTATTGATTGTGTTCGGAAAATGACTTAGTTTATT
AAGTAATCTTATAAATTATCAGGAAAAACTTGAGCATTTTTTAAGCTTTT
ATTTTTGTAGGTCTATGAGGCCCACTTTATTACATATATTATGGTGTCAT
TGATTCAAAAGATGTCATGATAGATTCTCACAATTGATGATATATTAGTT
TAAAATAGTAAACTATAATGAATCCACATTTAGGAATAAAATGAGATTAT
CTTATTATTGATGGCTTGCACTTCAGTTGCAAAAAACTAAAATACTTTAT
TCTTCATATTTCAGAATGTCTTTCTTGAAAATCCTTCGGAGCAACCCGTC
GTACATCTTCCAGAAGTTGAGTCGGAAACGATTAAACTTCTCCTTGACTT
CATCTATACTGGAGAGCTCCTTGTTGATGATGATGTACTCCTTATGAAAA
TTATGGATACTTCMAATATGCTATTTATCAAAGGGATTCATTCTGCTTTG
GAAGAAAAACAAAAGAAAAATAATTCTACTATGTTAAACGTTGAGACCAT
TGGGAACAAGAGAAAAACGAGAAGTCCAAGACAGTACATATCTTCTTCTC
CTCCAACAAACGGTTTAGTCACAGAGGAAGAGCCTAGAGATCTTAGTAGC
AGAAAGGTTAGGAGTCGTTCTATCTTTTCACTTCTCTATTAATGATTCAG
TAGACGTTTCTTCATACATGTTGTAAAATACTTTTTCAAATCCTAATGTT
TTGATTTATTTATTTTTAGATACATAACGAAAGTGATATTTTGAAAGATA
GGAAGGAAAATTTAAGCAATATAATGGAAGAAGGTGCTCTCTGCAACAAT
GACTACGAGGTTCCAAATCCATCTAAACTCATGTGTCTAGATGAGAGTGT
TGGTCAAGCATGGGCTTCAAATCATCAAGTATTCTCATCCCTTTTATCAA
AAGTTGAAGCGGATCCTCTACATATATCCGCTGTTCCTCGAGTTAAACAA
GAACAAATGCAACCACCATTCCCTCAACATCCTCCTGTAAATTTAACTAC
CGATCATATTAACAATATTCTTAATACAGTAAGTTGATGAAAATCATTCT
TTAAAGTGTGCTCAATTTACTCTTTCCTTTTCTAATTTGTGGAAATGTCA
TAATATACCTTTCCATAACATTTAAAAAAAGTTATTTTCAAAAAATTAAG
GTAATGATGTAATATTACATCATCTCTTCTTTTGATCGAGAATCGTTTAT
TCTCTCCTGGAAGCATCATATTTATTATAGCAAGGATTGTTGTTGTTTTA
ATAAAACCTTATTCATTTTTTATTTTCAGTCATCCTTGCCAATTTGTCCT
CTATGTGGAAAAGATTGTGCCAATTTTCCCAACCTAAGAACTCATTTACA
AACTCACAATAACTCCAAACCATTTGCATGCGATTTCTGTGATTCAAAAT
TTACACGTGCTTCCCATTTAAACCGTCACCGAAGGTCACACACCGGAGAA
AAGCCATTTGAATGTTCCATTTGTGGTAAATTATTTGGCCGACAAGATAA
GTTGAAGGTGCACGTGGATCGTCATCGTATCAGGGAACAAAAGGAACTGA
AAGCAGCGAATGGTGGTGTTGGAGCTAGACAAACTATGTCACAACAGAAT
AAGGGTTCTAATTTKCAGCCACAGCAGCATCACACGAACAATTGGAATGT
TAATGCAACATTCCCATCACAAGTCAGTCCATTCCCCACTTATTATGATA
CCATCCCAAAGACTCAACACAATACTCTGATGCCCTCGTTTATGGGATAA
AGTCCTCACACTACTCAAACAAAACTAAGAAATCATAATTACTATCTGAT
ATATTATTTTCTTAAATTTAATAAGAATACAATTTTTTTGCGAATGAGTA
CATGTATAAATTATTTAAATGACATAACTGGAAATCCAGTTGACTTTAAA
CAAAGAAGAAGATAAACATAATAAGTTAACATAAATTTCTGTTTAGAAAA
TAAATTTAAACTATTTGAATATTAGTAGTAAAGACTTGAAATATTCTCGA
GAAAAATAGATAACAAATTCTTATAGGATTTCATACACAATAAAGACTTT
TTTTTTTTTTTTTGTCATAAAAAGGAAAAAGTTAATACATTTTTAGGACT
AGATTAAACAACGACAGCCTTCTCGTCCACATCTCCCTTACCAACGAATC
CCAAAAAGTTATTATAGGTTTTATCTGTAATTTGTCGAATACTTTCATCG
GTGTAAAATGCAACATGACTAGAAATAATGACATTATCCATAGACACAAG
ATCCTCCAATTCAGGATAATTTTCAAATCCAACTTTTGACATATCTTTAA
ACATAAAGGCCTTTTCTCCTTCAAATACATCAAGAGCTACACCCATGATT
TTTTTAGATTTAAGACCATCCACCAAATCAGGTGTATTGATGATTTCTCC
GCGACTTGTATTGATAATAATGACATCCTTTTTCATTTTCTCGATGGTGT
CCTTATTAATCAAGTGTTGTGTTTCTTTTAGGAGAGGAACGTGAATAGAG
ATAATGTTGGAATTGGCAAAAAGGGTATCCATATCTACGTATTCTGCATT
AGGAACCGTTTTGATCCAATCGTTGGCGGGGTAAGCATCATAGCAGATAA
CCTTATCGACCATTCCGGCTACTTTTTGTACGGTTTTCTTTCCGATCAAT
CCAGTGCCGATAATTCCCACCTTTAAATATCAAAGAGAATAATTTAGCAC
ATACACACATTAAATTAATTAGTTTCATTACGGTTTTATCCTCAAGAAGG
ATACAGTGAAGACCTCCAATTCGGAAATCTGCCAATTTGGTCATTTCGTA
ACTTCTTTGAATGTTCTTTGCAAGAGCAAACATGGAAGAAATGGCATATT
CTGCAATGGAAGAAGGGGAGTAAGAGGGAACACGAGCCACTCGAATCCCC
GCCTCCTTCAAGAGATCATGTTTGGGAATGTTATCGAAACCTGCTGAGCA
GCAAAGAATCATTTTGTTTCCATTATCTTTAAGGATTTCTACGTCACTAT
CCTGGAGCTTTTTGTTAACGAAGATAACAATGGCTTGAAAGCCCTTGGCT
TTACGGAGAACATCTTCTGGAACKCCGCTGAATCCCTCAGCCACTTCACA
TTCAAACCCATTCTTTTCAAAAATCTTTTTCATGCTTTTGTTCAAATGAC
AACGAGTGTCGATGATAAAGATATCCTTGCCCATATTTGTAGTTGAAATT
TTCAATAGGTAAGATCCTTTACGTGGAAGCTTCTTGCTACTTGATGATGA
CCTCTAAGAACTTCACTCAGTTATGAAATAATTGCGAATGCAAACGCTTC
TTCAAACAAGAAAGAATATAAAAGGAAAGAGAAGAAGGAATACACAGTAA
TTTAAAATGTGAGGGAGTGCTACGATCGAAGGAAAGTCTGCGATTATAGT
GAAAGCTTGGCTGATGCAACAATTCTTCGTCGACTGTTTATGACCTCTTC
AGTAGAATCATTATTAATTGCATTAGTGTATTATTGTATTACTAAGACCA
ATATGATGTTATGTACATACATAATATTTCCCTCCTTTTTCTTCAAGGTA
CGCGATTATCACATGCACGGAGCTCTTGAAAAATTGCTGGATCACTCATT
GACTCAGTCATATAACAAATAGGTGGGGAATCCCCGCCAGACTCTGCAAA
TAGTTAAAATATTATAATGAATGCATGGCATATTTCGGAATATTAAATCT
ACAAAAAAAACCCTCAATCTAATCTCTCCTTCATGACACACGTTAGTAGT
GACATTGGGAAAATGTTTCATCATATTGTGAAAGACAAAATCAATAGTCC
ATGTTTTGTAAAAGTCCTGAAAGTTTTCCGATGGAAAAAGGGCTTTCTAA
GCATTCTGAAAAAACATGAAAATACCTAAAGTATTTATATTTACACTTGG
AAACATTTTA back to top
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