EMLSAT00000003117, EMLSAT00000003117-698964 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003117
Unique NameEMLSAT00000003117-698964
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s174supercontigLSalAtl2s174:157740..160455 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003117 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003117EMLSAG00000003117-685883Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013650EMLSAE00000013650-722578Lepeophtheirus salmonisexon
EMLSAE00000013651EMLSAE00000013651-722579Lepeophtheirus salmonisexon
EMLSAE00000013652EMLSAE00000013652-722580Lepeophtheirus salmonisexon
EMLSAE00000013653EMLSAE00000013653-722581Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773503auto773503Lepeophtheirus salmonispolypeptide
EMLSAP00000003117EMLSAP00000003117Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003117

>EMLSAP00000003117 ID=EMLSAP00000003117|Name=EMLSAP00000003117|organism=Lepeophtheirus salmonis|type=polypeptide|length=148bp
MEGMHFWKIKFDFTGHTRDLCVSLQTAQRKAFNMTFQFITQGILMPAVSI
FGIIGNSITIKVLKDRDVKLNKEFRDVLSGLATFDNLLLIFTFLLFSLPS
LSKTYKDEYFALTVPMLYPATNIFTTASRWISSLPQHQYVQQFKNREV
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mRNA from alignment at LSalAtl2s174:157740..160455+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003117-698964 ID=EMLSAT00000003117-698964|Name=EMLSAT00000003117|organism=Lepeophtheirus salmonis|type=mRNA|length=2716bp|location=Sequence derived from alignment at LSalAtl2s174:157740..160455+ (Lepeophtheirus salmonis)
ATGGAGGGAATGCATTTTTGGAAAATTAAATTTGATTTTACGGGACATAC
TAGAGATCTCTGTGTTTCACTCCAAACAGCCCAGAGAAAAGTGGTTGGAA
AGAGCCTTCTGAGGTTGAAGAGGCCATTTTTGACACCAGCAATAAAGAAA
TCTATCTCTTCTGATAAAAACTCTTTGGAATAAGTCTTTTGAGTTATTTT
TAGACACATTTCCCTCCCCCCCCCTCAACCTACATCCTTGATTCTAACCC
TGCAGCGTCGGTCATTTAAACACTGATGCTCTTAAAGCCAATGYCAGCCA
GTACKGGAACGCCATGACATCTGCAGCGGTTACCAAAGCTTCCACGGCCT
GCCTCTATGTGGGACTATATTAATGATTAAGAGACCTCAGACACACATAT
ATTTATAGTATTAATTTGATTGAAATTCTATTTTTGATATATTAATTATA
TCTTGTTGAAGTATAAAATTCATAGTGTTCAGATTTTAATGGACCAAATC
CCTTATATATATGTATATATATTATTAAATACTAATATTTATTTAATAAT
AGTAACCAAATAATTTTCTTTACAGGCTTTCAATATGACTTTTCAATTCA
TCACTCAAGGAATTTTAATGCCGGCTGTTTCTATTTTTGGAATAATTGGA
AACTCCATCACTATTAAAGTTTTGAAGGACAGAGATGTTAAATTAAACAA
GGAATTTCGAGATGTTTTATCAGGACTCGCCACATTCGATAACCTTCTAC
TCATATTCACGTTTCTTCTCTTCAGTTTGCCTTCGCTATCCAAGACATAT
AAGGATGAATATTTTGCTCTCACCGTTCCAATGCTGTATCCAGCTACAAA
CATTTTTACAACAGCTTCTAGGTAGGTTGTGAGTATATAATTACTAATTA
GGATGGATTTAATTAATCACAAGGAATTTTGACTTTGTCATTCAAATAAA
TTTATGTTAAAATTTGTAAAACATTTTCAAGTTTAGGTATTTTTATTTGA
AGAAGGGTGTCACAACATAAATTTCTTTATTCAAAAAGCAGTCAAACAAG
TGTTTTTTTTTTAATAATGATAATAGACATTAAAAGATTTGTTTTCACAG
TTTTTGAAAATCATACCAGAAAATTGATTCATGGTTGAATAAACAAAACG
AGGGTATTTTAATACTCGGACATAATATCATTTTTCTTTAACTAGCTTTT
AATTTAGCTTAATGTTTTAGGGGGATCATTATTTGATACAAAATAAAATA
AACAAGATATCTTATTGTTTAGTTGATTGGCTAGTTAAATGGTCAGCTAC
CTACTATCTTCAATCATTATGCTGAATTACATAGCTGTGTTATAAATTAG
TGTTTACTTATTACATTTTGAAATTCAAGATGGATTTCTTCCCTGCCTCA
ACATCAATATGTACAGCAATTTAAAAATAGGGTAGGTGGCATCGAGGCCA
AAACTTAATAAACCTTTAAATCCTAAGCTGGAGGACAAAACAGTCTGAAA
TTTGGATTTTTGAGTTTTTAAATAATATTAAAATGTGTGAGGGATTCTCC
AAAGGTCATAAAGCAGTTGGTTTTTTTGTAATAAATCCGATTTTAATTTC
CCCATTTCGACCTATTGTATCAATTTAAAATTTTTGCACAACATCAAAAC
GTGATGGCACCTATTTGGCTCTCTAGGATTATTATATGTGGATTTATTTG
CTGTCAAAAAACTTAGAAAATTTCAAATTATTTTCAAGAATTGAAAAATT
GGTTTTTTTGTTTTAGAAATTGAAACAATTGAGAGATTTTCATTTATAGA
GACTAGTTCAATCTTATAAAATATTCGGTCAAGCTATTTATTGGCAATAT
TTATTTTAAACTACNCAGCCACATTCCTCACTACTACAACGCAGGATAGC
AACTGACTTTATTTCCAAGAAAACTTTAGAATCTTGCCTGTACACTCACT
TTGCTACTTCTTCCACAGTCTGATTGCCACGAATGATAGAAAATGAAGTT
TATAATTCACAAACTATTACCTAGTTCCCTATTTGTTTAGTCTAATTTTC
TTATTCTAATAAATTTAATTTATTTTACTTGAAACCCTTAGATATAAATC
TTCGGGACATCTGACATTAATATTTGAGAAGTGTTGCAATTCAACTTATT
CTTTTAAATGTCTCATTGCATTTAAAAATTACGGTATCCTCACATTTCTT
TTAATAGGTATCTTTCGGGTTCTGTAACTGATCAATTGTTTGGAACCTTG
TTAGGATTTTCTACATAAAATTACCTGTTGGGCCCATAGTTTATTCATCT
ATTTGACGAAATATGCTAAATAGATTCCATGCATATTATGTATAAGATCG
TACAATCAAAGAATAATAATTTGTAATTTACCATTTGAATCGCTCTATAA
TACAGATTTATCCTCTCCACAGCATATAACTTAAGTTATCATATGTTGAA
TATTATCCGCGTAGATACGTAGAAAACTTTTAGAATATAACAGATTTATA
AGTAAAAATAGTATTTATTAATATATAAATCTAAACCATTATTTACTTCT
TAATAAATGGTTAATAAAGCATAGGATAAGGGACCCCTGGGACAAATGAT
TTACGTCAATGTTGATTATTAAAGTATGGGAAGAAAAGGTTATATTAATC
ACAACTATGTAGTTAGAAAATATTACATTTGCCTCATTATATTTTTTATA
ATTTTAGGAAGTGTAG
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