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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1753 | supercontig | LSalAtl2s1753:14457..18648 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003120 >EMLSAP00000003120 ID=EMLSAP00000003120|Name=EMLSAP00000003120|organism=Lepeophtheirus salmonis|type=polypeptide|length=945bp
MSXXRLXKEDDDDPLVIDEDAAEKEFEPSVEMMVNDFDDERTLEEEEALE
TREEDEAEELNALNQEQDIPIEDLLKMYGYDPNSNSSTQGPNHLSGPARI
DSTTEVSREGGGEEDDADGDDEEEEEPFLGSSPSTLVNKDKDSVAPCRTA
NLEEDENHSKKRPSNSSSPSPKKCKSELTRFYESTIEGRSLRSTTSNQGD
EEDSDTGGAEGGQESDLEGRDFSWKKTIMIGPSFQASVPAGLSKYGDSLP
YENDDKQLWDPKLLSPDEVENYLTKSYETVHNNGGNSVGSLPLGAHIRDD
EQALFLLFQCGYNYEEALRRRRMNVVSPADTMSLWSEDECRAFELGLRLY
GKDFTMIQQQKVRTRSVGEIVQFYYLWKKTERHDVFANANRLEKKKYTLH
PGTTDYMDRFIDEQDSTRDRSSSPNYHSLLYGASNNTGESHGSVLTVFTI
FILYFLQEISEVQCQEFNDSLNFYSTGKEVRDQIQVTLTKLLTSYNRRIR
PNFGGPPCKVIMNLLINSMGPVDEKSQSYLVDAYFRQAWVDQRLSFNATS
SVTELPLNWQILNKIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSF
SQRLTIHAQCLMELKKFPFDSQECPLHIGSYGYTADEVLYDWKDNALEIS
TLAKATMTQFNLMKWISQAETSITNRKIAAGFRNDSIASINFSFKRQYGF
FLLQIYTPMFIIVMCSWVAFWIVKTDAPSRVSLGVASSLSVTKIGFAGKG
KPNVEYPTALDIFIIICFMTVFLSLVEYALINYISVFISRYKAREKKELL
ARTKFGKLLSKRQKRHLLKQKDMMKTISQLTIENNPSDDENVKTKSAGTM
TDNTPLKGVHFKASTLEVSKIAQRASDLIFKFCETIERFLTLAITFISPK
PVSQMYIYTHTEEALEKIDSLARKLFPLTFIFIMFSYILLYFYIL back to topmRNA from alignment at LSalAtl2s1753:14457..18648+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003120-698967 ID=EMLSAT00000003120-698967|Name=EMLSAT00000003120|organism=Lepeophtheirus salmonis|type=mRNA|length=4192bp|location=Sequence derived from alignment at LSalAtl2s1753:14457..18648+ (Lepeophtheirus salmonis)
GCAGCAAAAGACTCATCACGATAGTTAATAAATATTAGTAAATAAATAAA
TAAATATAAACTAATTATTAAAATAATTAATCAAATCCTTTGATTGTGGC
TGGRKCATGTCGGRGAAWCGKCTGRGKAAGGAGGATGATGATGATCCACT
GGTCATTGATGAAGATGCAGCTGAAAAGGAATTCGAGCCATCCGTAGAGA
TGATGGTGAACGACTTCGATGACGAGCGGACATTAGAGGAGGAGGAAGCT
CTGGAGACCCGTGAAGAGGACGAAGCAGAGGAATTAAACGCTCTTAATCA
GGAACAGGATATACCAATCGAGGATTTGTTAAAAATGTATGGTTATGATC
CCAATAGCAATAGCTCAACTCAGGGGCCCAATCATCTTTCTGGCCCTGCT
CGTATTGACAGTACCACAGAAGTGAGTAGAGAAGGTGGAGGTGAGGAAGA
TGATGCAGATGGAGATGATGAAGAAGAGGAAGAGCCTTTTCTTGGTTCTT
CTCCATCTACTCTCGTTAATAAAGACAAGGATGTGAGTTGTAACACTAAC
TTCGAAATTCCATTTACTTCATGTTTCATAATGTTATTGTTCTTTCTTTT
CAGTCTGTAGCCCCTTGCCGTACTGCCAATCTTGAAGAAGATGAAAATCA
TTCCAAAAAACGACCTTCCAATTCCTCCTCTCCATCCCCAAAGAAATGTA
AGTCCGAACTGACTAGATTCTATGAGTCTACGATCGAGGGAAGGTCCCTC
CGTTCAACTACCTCCAATCAAGGGGATGAAGAAGACTCTGACACTGGAGG
TGCAGAAGGGGGTCAGGAGTCGGATCTTGAAGGAAGAGACTTCTCTTGGA
AAAAGACGATCATGATTGGACCTTCATTCCAAGCCTCCGTCCCGGCTGGC
CTCAGCAAATATGGAGATTCTCTTCCCTATGAAAATGATGATAAACAGTT
ATGGGATCCTAAGCTATTGTCTCCTGACGAGGTCGAAAACTATTTAACCA
AATCATATGAGACAGTCCACAATAATGGAGGAAACAGCGTTGGAAGTTTA
CCTCTCGGAGCGCATATCAGAGATGATGAACAGGTACTCATAAACATGAC
TCACATTAACATATGAGTTCTCTAAATATCTATATTATAACTTAAATATA
TATATATATTCTTAATTTAATCAGGCGTTGTTCCTTCTTTTTCAATGCGG
ATATAATTACGAGGAGGCCCTTCGTCGACGTCGAATGAACGTTGTATCTC
CTGCAGATACAATGTCACTTTGGTCTGAAGATGAATGTCGTGCATTTGAG
CTTGGTCTTCGTCTCTATGGAAAGGACTTTACTATGATACAGCAACAAAA
GGTTCGAACGCGCTCTGTGGGGGAAATCGTTCAATTCTATTACCTTTGGA
AAAAAACTGAGAGACATGACGTATTTGCAAATGCCAATCGGCTCGAAAAG
AAAAAATATACTTTGCATCCGGGTAAAAATAAACATATCAATAGCACATT
TACAAAGATATTTTAAACTAAAAACAACCGCAGGAACAACAGACTATATG
GATCGATTCATTGATGAACAAGATTCCACGAGAGATCGCTCTTCTTCACC
AAACTATCATTCTTTACTGTATGGCGCATCAAACAATACAGGAGAGTCAC
ATGGCAGTGTTTTAACGGGTAAAAACTATTAATTAATCCAGTCACGTGCC
TTATCCTTCAATCTATTTAAATATTTACAGTGATGCAAAGCAGCAATACT
AATAACAAGTCCTCTTCCTCCTCATCTACATCCTCTAACGGCAATTTTCA
GTCCACTTCCACACTTCAAGGGCCTTGACTATTTCTTACTTTGTTAAATA
ATTATAGAAATCAAGATGTTATGTATATACATATATATTTGATAATATCA
GAGACTTGCTATGCCACGGATATTCTCTTAATTTCAGTGCCCCCTCAATT
CTCTATTTGGCCTCGACTACTAATGGACAGACAAGGATTTATTTCGTCAT
ATATAATCAGATAATTCTATGTTATATTTATTTCCATCCCTCACGAGTTA
CGGCAGAGGATCGTGTACATACATTAGTTACGAATCTATCTATGTATTAA
TCATCATTCGAAAGACATGAGTAACTTTMCATCTTATCTMCYCAGCCAAT
CCCTCCTCACTACAACGGTCATTAAATGGATGATTTTTTTTTACTCTATT
TAAAACTAAATGTATTCCTCTGTTTTTTATTATTATTCATTCTTGATAGA
TTCTGTTTGTTTAAGGCTTTTATTGTACTTTCATATATTATTATTATATA
TATATTCACAAACACACACACATTTATATATATCCATATATATATATTTA
TTAGATTGATAAAAAAAATAAATTTTTATTACTAAAGCCACTTTTCACCT
TTTTTTTTTCTTCTTAAAATACATACTCCTTTCATTTTGTGCATCCTTTG
CCAATTTCAAGCAATAAAAAGAACACAATAATATGTACTAATATAAATTA
ACATAATAATAAACACTATGTCACCATTAAATGATGATCAAGAAGCACAA
TGAGGTTCACTCATCAAGTCTTCACTATCTTCATCCTGTATTTCCTTCAG
GAGATTTCTGAGGTACAATGTCAAGAATTCAATGACTCTTTAAATTTCTA
TTCAACGGGGAAAGAGGTCAGAGATCAAATACAAGTCACTCTAACTAAGC
TACTCACATCCTACAATCGACGCATTCGTCCCAATTTTGGAGGTCCTCCA
TGTAAAGTTATTATGAATTTGTTAATTAACTCTATGGGACCAGTTGATGA
GAAATCTCAATCCTACCTGGTAGACGCTTATTTTAGACAGGCTTGGGTTG
ATCAACGTCTATCTTTTAATGCTACATCCAGTGTCACTGAGCTTCCTCTC
AATTGGCAAATACTTAATAAAATTTGGAAACCAGATACCTACTTCATTAA
TGGAAAAAAATCAAAAATGCATAAAATCACGGTGCCCAATCGATTTCTTC
GAATCTCACCGGGTGAGTGATAATTATATATATCATGAAGATGATTTTAA
ACTTATTTTTTTCGTATAAATAGATGGTCTTGTGAGCTTCTCTCAAAGAC
TCACCATTCATGCACAATGTCTCATGGAACTCAAAAAATTCCCTTTCGAC
TCACAAGAATGTCCCCTCCATATTGGAAGCTATGGTTATACGGCAGATGA
AGTCCTCTATGATTGGAAAGATAATGTGATTAATTGAAGCAGCAACCTTA
GATATCAAGCAATCAATGATTAATTAATTTATTTGATAGGCATTGGAGAT
AAGTACTCTTGCCAAAGCAACCATGACTCAATTTAACCTCATGAAATGGA
TTTCACAGGCGGAAACTAGTATTACAAATCGCAAGATTGCAGCCGGATTT
CGAAATGACTCAATTGCATCAATTAATTTTTCCTTTAAAAGGCAATATGG
TTTTTTTCTTCTTCAAATATATACTCCAATGTTTATTATCGTCATGTGCT
CTTGGGTTGCCTTTTGGATTGTCAAAACAGATGCTCCATCTCGAGTTTCA
CTTGGTGTTGCATCTTCCCTCTCTGTTACCAAAATTGGGTTTGCAGGAAA
AGGAAAGCCAAATGTAGAGTATCCCACGGCTTTAGATATCTTCATTATAA
TTTGTTTTATGACTGTATTTCTAAGTCTAGTGGAGTATGCACTTATTAAT
TATATCTCCGTATTTATTAGTCGCTATAAAGCAAGAGAGAAGAAAGAGTT
GTTGGCTAGAACGAAATTCGGTAAGTTACTTTCCAAACGACAAAAACGCC
ATTTATTAAAACAGAAAGACATGATGAAAACTATATCACAACTTACAATA
GAAAATAATCCCTCTGACGACGAAAATGTCAAAACCAAGAGTGCAGGTAC
CATGACTGATAATACTCCTCTTAAGGGAGTTCATTTCAAGGCTTCAACTC
TAGAAGTCAGTAAAATAGCTCAAAGAGCATCTGACCTAATTTTTAAATTT
TGTGAAACAATTGAAAGATTTTTAACATTAGCTATAACTTTCATTTCACC
AAAACCGGTGTCCCAAATGTACATTTATACACATACAGAAGAGGCCTTAG
AAAAAATCGACTCCTTGGCCAGAAAATTATTTCCTTTAACGTTCATTTTC
ATCATGTTTAGTTATATTCTATTATACTTTTATATACTTTAG back to top
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