EMLSAT00000003148, EMLSAT00000003148-698995 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003148
Unique NameEMLSAT00000003148-698995
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s175supercontigLSalAtl2s175:61332..63830 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003148 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003148EMLSAG00000003148-685914Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013806EMLSAE00000013806-722734Lepeophtheirus salmonisexon
EMLSAE00000013807EMLSAE00000013807-722735Lepeophtheirus salmonisexon
EMLSAE00000013808EMLSAE00000013808-722736Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771039auto771039Lepeophtheirus salmonispolypeptide
EMLSAP00000003148EMLSAP00000003148Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003148

>EMLSAP00000003148 ID=EMLSAP00000003148|Name=EMLSAP00000003148|organism=Lepeophtheirus salmonis|type=polypeptide|length=345bp
MVLIGGTTTILIPSKRMTEIEENPGVCNPSEIDINSNVSRETIEESAPED
LNDDCCDVEGEVEEQEERVPSPAPVSIVIKEIPIGDPRIRSKIKFQVVTA
HVTEAGGKKHVLYTIMMKRINDNSRPAIINRRYNDFNNIYECILRSYHPS
VLGDFQFPKKVLIGNFKAEVITERTEAFHKFLNLIAASENLLYSDYFYSF
LSSDEHNEAVSYIKLSHFADAVPLLENIFNVREKLLTISSFYVLSVLCEL
IACQNAAGKKEAAFAHCLIAVKSFELLSGLQEAEVFRVPFLLLASNLAEA
LGQSKKPFDRKISELRYKGIKVSGVKSLLEVVQEKYIHIASHTSK
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mRNA from alignment at LSalAtl2s175:61332..63830+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003148-698995 ID=EMLSAT00000003148-698995|Name=EMLSAT00000003148|organism=Lepeophtheirus salmonis|type=mRNA|length=2499bp|location=Sequence derived from alignment at LSalAtl2s175:61332..63830+ (Lepeophtheirus salmonis)
TTAAAATGATTCATTTTACATTTAAGATCATGGGTGCAAGTGCCTGTCCA
CCTGTTTTCTATTTAAGAGATTCATATTTTTGGAATATACTGACAACTGA
CTAGGAAATTATGATTTTTGAGAATGTAGTTCAATGATGTGGTACCCTTG
TCAAAAATGCTGTTCACACAAATCAGTCATCATAATACAACCCTAACTAA
GTAAGTGGTTAAACAACTCAACACTCAAGGGTATTAAATATGAATTATTG
TTGTGAAAGTCTAAAGAAATAACAAATTAGAAATCATATGGTTATATTCG
TAATTCTAAGCCATGGTATTGATTGGAGGAACGACAACCATCTTGATTCC
GAGGTGAGGAGTTATTTTCCTAGCTATTTGACAGATACTAGAAAAATGAA
CATACAGAGTAAACATTACGTCATTAGAGATAGAAAGAGAAAGAGCGTAG
GCGGAGAAGGCGGAGCTAACTAGCCCATTTCTGATGACAGTGATGAGATG
TTTTGAAGCAGCATATAAAATTTATGACGTCATATAATTCCTTGATCTAC
CGTTTCTATCCAGCTTCTGCTCTATCTTTCCTTGCTCCAGTCGTCATCTT
CATTCTCTAATTGTTTTACTTAATGAATTGAAAATTTATAATTAATAATT
ATTGCAGTAAAAGAATGACAGAAATCGAGGAGAATCCTGGAGTATGTAAT
CCATCTGAGATAGACATTAACTCGAATGTCTCCAGAGAGACGATTGAAGA
ATCTGCTCCTGAAGATTTGAATGATGACTGCTGTGATGTGGAGGGAGAAG
TGGAAGAGCAGGAGGAGAGGGTCCCTTCCCCAGCCCCTGTATCTATAGTT
ATTAAAGAAATTCCCATTGGTGATCCGAGGATTCGTTCTAAAATCAAATT
TCAAGTGGTTACTGCTCATGTTACTGAGGCTGGTGGTAAAAAACATGTCG
TAGGTTTCTTTTCCTTTTTTACATTCCCCTTCCCTCATTTCAAGGATTAC
TATTTGATATTTCAGTTATATACCATCATGATGAAAAGGATCAATGATAA
CTCCCGCCCTGCTATTATCAACAGAAGATATAATGACTTTAATAATATTT
ATGAATGTATTTTACGCTCCTATCACCCTTCAGTTCTTGGCGACTTTCAG
TTCCCTAAAAAAGTGCTCATTGGAAATTTTAAAGCTGAAGTCATTACTGA
AAGAACGGAAGCATTTCATAAGTTCCTGAATCTCATCGCTGCATCGGAGA
ATTTACTTTATTCGGATTATTTTTATTCTTTCCTCTCATCAGATGAACAT
AATGAAGCTGTTTCCTATATTAAATTGAGTCACTTTGCAGACGCTGTTCC
TCTCTTGGAGAATATATTTAATGTCCGAGAGAAACTTCTCACAATTTCAT
CGTTTTATGTCCTGTCTGTACTGTGTGAACTCATTGCTTGTCAAAATGCA
GCGGGTAAAAAGGAAGCCGCTTTTGCTCACTGTCTCATCGCTGTCAAATC
TTTTGAGCTTTTATCTGGGCTTCAAGAAGCAGAAGTATTCAGAGTACCTT
TTTTGCTTCTGGCTTCTAATTTGGCTGAGGCCCTTGGACAATCTAAAAAA
CCTTTTGATAGGAAAATTTCAGAATTAAGATATAAGGGCATTAAAGTAAG
CGGAGTCAAGTCTCTTCTGGAAGTCGTGCAAGAAAAATACATTCACATTG
CCAGCCATACATCAAAATAATAATACTATTTGTCTATTTTACTCTCATTC
CCCGTAATATATATTTTTTTCCTTATCCTTATAGCATTTATTCATATCAT
TGGATCCCCTTTTCCTCTATATTTTTATTACAATGCATTCATTCAAAAAC
AATTACTCAAAAAACATCATATTCTTCATATTGAAAATGTATAAAAAGCT
TTCCAGGATAATATATAAAGGCACTCATAGATACTGTAGCAACATTGAGG
AGCTTACATACAAATTTGCATAACATTATTCTAACATACAAGTATACCCA
TGATTTTGTGTTCTCAGTTATTATATGGATACGTGAGAAGAAGAATGGTT
TCAAATAGCTATGAAAGGACAAGCTTGAAAAATTATGCTATTCAACTATT
TCTTTATATGTGGCGTTATAGATTTTTTAACCATATTATTCTTCTAATAA
AAGTCAACTTAAAAACAATTTTTTTTTTTCTTCTCTCTCTCTCTCTAAAT
ACCTGATGCCAACATTGCTAATTGTTTCAGTTGATAATTAATTCTGATTG
TTTCACTTTTTTCCATACTCAAAATATAGTTATAATGGTTGATTCCTAAA
TTTGAAATTGCCTCATTCCTTCCATTACTAAAGACACTTGTTCGAAGACT
GTAATAACAATTACAATAGCTATCGGTCAAATAAAGAAGGATTTAAATTT
TAATTTATTCTCGATGGAACCCAAGAGAACTAGATTCAGTAGTCATTGAT
TCAATATATCTTAGGATAAACTCTTGTGTAATCCATTATTCAACGTTTC
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