EMLSAT00000003164, EMLSAT00000003164-699011 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003164
Unique NameEMLSAT00000003164-699011
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1768supercontigLSalAtl2s1768:18046..19542 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003164 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003164EMLSAG00000003164-685930Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013870EMLSAE00000013870-722798Lepeophtheirus salmonisexon
EMLSAE00000013871EMLSAE00000013871-722799Lepeophtheirus salmonisexon
EMLSAE00000013872EMLSAE00000013872-722800Lepeophtheirus salmonisexon
EMLSAE00000013873EMLSAE00000013873-722801Lepeophtheirus salmonisexon
EMLSAE00000013874EMLSAE00000013874-722802Lepeophtheirus salmonisexon
EMLSAE00000013875EMLSAE00000013875-722803Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769323auto769323Lepeophtheirus salmonispolypeptide
EMLSAP00000003164EMLSAP00000003164Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003164

>EMLSAP00000003164 ID=EMLSAP00000003164|Name=EMLSAP00000003164|organism=Lepeophtheirus salmonis|type=polypeptide|length=298bp
MFVAFVLILTVLFRQTLSTCDCGLPNPKIPMIGDTSSETKPVFPHESIPW
HVTIKKEAKQIECSGVIISEGYVLTDSLCFWISDEVQVYAEYKDMKFLQN
VVGTVVMKEIGANVIKLSENLNLNENVMSACLPSDPVQSFIGKKGIVSHI
FENQILYKDYVTIISNNDPKCDRSTNNICARTSTCYKSKGHPLVTLHNGK
WTLVGINWENGCDNSNKDTAFGSIPKIANTLRDELKLDDSCSHVKNHPVV
PKCDLNCLFHGLNSTLKDDKFSLFCKNGYCKIQNSTFDICDPKLCIIV
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mRNA from alignment at LSalAtl2s1768:18046..19542+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003164-699011 ID=EMLSAT00000003164-699011|Name=EMLSAT00000003164|organism=Lepeophtheirus salmonis|type=mRNA|length=1497bp|location=Sequence derived from alignment at LSalAtl2s1768:18046..19542+ (Lepeophtheirus salmonis)
TTCGGGCATTATTTGTAGCATCATGTTTGTTGCTTTTGTATTGATATTGA CTGTTTTGTTTCGTCAAACACTTAGTACTTGCGGTATAATATTTCTTTTT AGTTAATTTTATATTGCCACATATTAATCCTATCATTTATTAGACTGTGG TCTTCCAAATCCTAAAATCCCAATGATTGGAGACACTAGCTCAGAAACAA AACCTGTTTTTCCTCATGAAAGCATTCCTTGGCATGTCACAATAAAAAAA GAAGCAAAACAGATTGAATGTTCTGGAGTTATAATAAGTGAGGGATATGT TCTAACTGACTCACTTTGTTTCTGGATAAGTGATGAAGTCCAGGTGAATA AATTCGTTCTTTATGTATCTATAATTATCTTTATTTTCAAGATCTTTGTC TCTTTACCTAGGTTTATGCAGAGTATAAAGATATGAAATTCTTGCAAAAC GTAGTAGGAACTGTTGTGATGAAAGAGATAGGAGCAAATGTTATTAAACT CAGCGAAAATCTAAATTTGAACGAAAACGTAATGTCTGCATGCTTACCTT CTGATCCAGTTCAATCTTTTATCGGGAAGAAGGGAATTGGTAATATCAAA AACACCACTCTAATTTCCTAACATAATTTTTGTTAAACTTCTGTTAATTA GTATCTCATATTTTTGAGAACCAAATCCTCTACAAGGACTACGTCACTAT AATTTCTAATAATGATCCAAAATGCGATAGGAGTACAAATAATATTTGCG CTAGAACTTCCACCTGTTACAAAAGCAAGGGCCATCCCCTGGTTACACTT CATAATGGAAAGTGGACCTTGGTTGGAATTAATTGGGAAAATGGTTGTGA TAATTCAAATAAGGACACCGCTTTTGGGAGTATACCCAAAATAGCAAATA CTTTACGAGATGAATTAAAGGTAATATGGCATATTCAATCGAAAAATTAG AAATAAAAAGATATTTCCAGTTGGATGATTCATGTTCTCACGTTAAGAAT CATCCAGTTGTTCCTAAATGTGACTTGAACTGTCTTTTCCATGGTCTAAA TTCTACTCTGAAAGGTGAGTCCAAATTTTTAATATCAAATCAATGGATTT CAATATTAATATAATATTTATTTCATTATTCATTTGGATCATTCAAGATG ACAAATTTTCCTTGTTTTGCAAAAATGGATATTGCAAGATTCAAAATAGT ACTTTTGATATCTGTGACCCAAAGCTATGCATCATTGTTTAATAAATCTT ACCAAAACTTTGCATTCAAATACACTTTTATTCATAATTTTTGTCTTTTA GGAAGCTACTTATTTAATAATTTTATAAGTGGAATAGTAAAATTAAATCA CATTTGTCACATAATGTCCATATTATGTACATATATGTAAATAGTTCAAT GTGTGTATGTATCTTTTATGGGTACCTAGGAAGTTGAAACTTTGAGTAAG TGATTTTTTAACCTAGTCAAGTTAAGACGGGAATACCATTTTTTGGG
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