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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s176 | supercontig | LSalAtl2s176:344442..348782 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003172 >EMLSAP00000003172 ID=EMLSAP00000003172|Name=EMLSAP00000003172|organism=Lepeophtheirus salmonis|type=polypeptide|length=1248bp
METEEPKDKSIKEDLTGKVIISKNESTKTRSTKLSDKKIQDVSEKSTQKS
RSHHSDKSSILATTNLGRKSKASTHKSQKKSEVSSKSYKSSKKTQEGSSN
GKSKTNGTKESTKKTIQISKTDLREKDLVSLKTKSTKLSETDSTLFSKKL
QGLSEKSSQKSRSHXSDKSPILDNKSGSKSKPSTEKSPKKSEVSTESCKS
PNKTQEESLSGKSKTNQTKASAEKSNDTTSDPKNFKSDNYKMKDQKSNPS
HEKKSEDLSIDLNKFEVSSQDSISSIKTSESIFSVNTQDSIDYMTEKRSL
NKSYQASYLYHEDEDLVKDFNDGSQNLSFLKIYSDKENTEISLIVASVKD
SSSCFEENTTERLELLESVEISQIESFESHEDQAEGKNLKQINYNCDSNQ
ESNPPSDHCLPLEKLDDIGNLTILSVETYTKHTKRTDYGNEQLKTELADP
ELKVKSYHDLNKSDSNSTSSSDCESSSNKSTSETTGSGSSSNKSTSEITK
CESSSNKSDSETSDSENFKESCSNQSLKYKHSNNKLSRDQNKYESNRSVS
DENDKLSPNKEESESSSSNMRSSKNKYFSKKSKPSNPKKAHSKTNAENSS
NKESQSKPYLSIKNKKYYSKKSNKEDHSNIKTNISNDSNVSKLTGKKSKK
PISQSNTITDEKLSNTSQKSVLFTKEDQPIEYWLQSTSSTKSKLNSSTIS
SSAILKEKSYLNKEISAFNSTKITLEPSPTNNLSIESFSNDDNKSKSPID
LVSKIEDSSQRYESSNFSKNRSQNNLLTSDTIFQNKVEMVSDFESPITPT
STLNSRNILSINDKPRVMSSEITPYKEESTSVELKGNKVDGERDSDAPNV
PKDNSSFLPGQVLVNDMMATVKSALENRLAKCDIDDIMAKIFANDAKNKI
TDVPHAPSNQVVNHLVIEDSNVDKNNLEKVIIDENIKDGERHENSTTIIE
THSQNIFTSQSKTIQNDELLKDEFVTIIKNPHENSSQTTSINQISSSGGL
TTHQMDKSTPNQSLNLFENKHILSPNKVEYSNKLESSCSSNHLDETFSEE
NIPKDKVSETVTSLLAGGENLQLNTSNDYLLEDVVGNGSYRSKNNIVNAD
NSEEKLINRSDVASFGRTHIRLEDDPCRTDNNGIVVDYQDIRDEQPEKVI
DIRLGNLRARHVYEIVVDISNDQLEVDVKDITFSKQCAQLASIIQKDDTN
VCCVFYLESNHDENLERCLAINVKNLQTGEVKDNYSIIFHAKVIDQKR back to topmRNA from alignment at LSalAtl2s176:344442..348782- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003172-699019 ID=EMLSAT00000003172-699019|Name=EMLSAT00000003172|organism=Lepeophtheirus salmonis|type=mRNA|length=4341bp|location=Sequence derived from alignment at LSalAtl2s176:344442..348782- (Lepeophtheirus salmonis)
ATGGAAACTGAAGAACCCAAGGATAAGTCGATTAAAGAAGATCTAACAGG
AAAAGTTATCATTAGTAAAAATGAAAGTACAAAAACGAGATCGACGAAGT
TATCTGATAAGAAGATTCAGGATGTATCTGAGAAAAGTACTCAAAAGAGT
AGATCACATCATTCTGACAAAAGTTCGATTTTAGCTACAACGAATTTAGG
AAGAAAATCCAAAGCAAGTACACATAAATCTCAGAAAAAAAGTGAAGTAA
GTTCAAAATCTTATAAATCATCAAAAAAGACACAAGAAGGATCTTCAAAT
GGGAAATCCAAAACCAATGGAACAAAAGAATCTACAAAAAAAACAATTCA
AATCTCAAAAACAGATCTAAGAGAAAAAGATTTAGTGAGTTTAAAAACGA
AATCGACTAAGTTATCTGAAACTGATTCAACATTATTTAGTAAGAAGCTT
CAGGGTTTATCTGAGAAAAGTTCTCAAAAGAGTAGGTCACATSATTCTGA
CAAAAGTCCAATTTTGGATAATAAATCAGGAAGTAAATCCAAACCAAGTA
CAGAAAAATCTCCCAAAAAAAGTGAAGTAAGTACGGAATCTTGTAAATCA
CCGAATAAGACGCAAGAAGAATCTTTAAGTGGAAAATCTAAAACCAACCA
AACAAAAGCATCTGCAGAAAAATCAAATGATACAACTTCTGATCCAAAGA
ACTTTAAGAGTGATAATTATAAAATGAAAGATCAAAAATCAAATCCATCT
CATGAGAAAAAGTCTGAAGATTTGTCGATCGATTTAAACAAATTTGAAGT
TTCTTCTCAAGACTCAATTTCTTCAATCAAAACTTCAGAATCGATTTTTT
CAGTTAACACTCAAGATTCTATTGATTATATGACTGAAAAGAGATCATTG
AACAAGTCTTATCAGGCATCTTATTTATACCATGAAGATGAAGACCTAGT
TAAAGATTTCAATGACGGATCGCAAAATTTATCTTTTCTGAAAATATATT
CTGACAAAGAAAACACAGAAATAAGCTTGATAGTTGCTTCCGTTAAAGAT
TCAAGTTCCTGCTTTGAGGAAAATACAACTGAAAGACTAGAACTATTAGA
GTCAGTTGAGATTTCTCAAATTGAATCTTTTGAATCACATGAAGATCAAG
CAGAAGGGAAAAATTTGAAGCAAATAAATTATAATTGTGATTCAAACCAA
GAATCTAATCCTCCTTCTGACCATTGTTTACCGTTAGAAAAATTGGATGA
TATAGGAAATTTGACTATTTTGTCAGTTGAAACATATACAAAACATACAA
AAAGAACTGACTATGGTAATGAACAATTAAAAACTGAACTTGCAGATCCA
GAATTAAAGGTAAAATCTTATCATGATTTAAATAAATCAGATTCAAACTC
TACATCATCATCAGATTGTGAATCATCGAGTAATAAATCAACTTCTGAAA
CAACTGGCAGTGGATCATCGAGTAATAAATCGACTTCAGAAATTACAAAA
TGTGAATCATCGAGTAATAAATCTGATTCTGAAACATCAGACTCTGAAAG
TAACTCTGCTTCCAAGATAAAAGTTTTGAATTATCAAGTAATCACTCTAA
TTTGTCTGATACTAAGGAATATAGTTCGGTTCATGAGTCAGGAGAGATGC
AGTCAAATTCTAAAACATCAAAATTATCTATTACAAAATTACATTTATCT
AATGAAGGAGATTCAAATAATTATTTAGAGGAAATGGATTCAGATAATAG
AMCATCCAATTCAAAAAAAAAAAATTGTCATCAAATAATGGAGGTAGTAC
TTCAGTGGATGAAAAATATGATTCAGCTATAAAAAAATTGAATACCACTT
CACATTTATCAACTACAAATTCATCAAAAGCTTTATCAACAGATTTTAAA
GAATCATGTTCAAATCAATCATTAAAGTATAAACATTCAAATAATAAATT
ATCACGGGACCAAAACAAATATGAATCAAATCGATCTGTAAGTGATGAAA
ATGATAAATTATCTCCTAATAAAGAGGAATCAGAATCATCCTCATCTAAT
ATGAGATCATCAAAAAATAAATACTTTTCAAAAAAATCCAAACCATCTAA
TCCTAAAAAAGCTCATTCAAAAACAAACGCCGAAAATTCATCAAACAAGG
AATCACAATCTAAACCTTATTTAAGTATAAAGAACAAGAAGTACTACAGT
AAAAAATCAAATAAAGAAGACCACTCCAACATAAAAACGAATATTTCAAA
TGATAGTAATGTTAGTAAATTAACAGGAAAAAAATCAAAAAAACCAATTA
GCCAAAGCAATACAATTACAGATGAAAAATTATCGAATACTTCTCAAAAG
TCAGTTTTATTCACAAAAGAGGATCAACCAATAGAGTACTGGCTCCAATC
GACCTCTAGTACAAAATCTAAACTAAATTCAAGTACAATTTCAAGCTCAG
CGATCTTAAAAGAAAAAAGCTATCTTAATAAAGAAATTTCTGCATTCAAT
TCTACAAAAATAACTCTTGAACCATCTCCCACTAATAACTTATCTATAGA
ATCATTTAGTAATGATGACAATAAATCCAAATCACCTATAGACTTAGTTT
CCAAAATTGAAGATTCCTCACAGCGATATGAATCTTCAAATTTTTCTAAG
AATAGATCACAAAACAATTTGCTTACTTCCGATACTATTTTTCAAAATAA
AGTGGAAATGGTTTCGGACTTTGAATCTCCTATAACACCAACTTCAACTC
TTAATTCCAGAAATATATTATCTATTAATGATAAGCCTAGAGTAATGTCT
AGTGAAATAACACCATATAAGGAAGAATCAACTAGTGTAGAATTAAAAGG
GAACAAAGTTGATGGGGAGAGAGACTCTGATGCTCCAAATGTACCTAAAG
ATAACAGTTCATTCTTGCCTGGCCAAGTTTTAGTAAATGATATGATGGCA
ACAGTTAAATCGGCTCTCGAAAATCGACTTGCAAAATGTGATATTGACGA
CATAATGGCTAAAATTTTTGCAAACGATGCAAAAAATAAAATAACAGATG
TTCCCCATGCTCCTTCTAATCAGGTTGTAAATCATCTTGTTATTGAAGAT
TCCAACGTGGACAAAAATAATTTGGAAAAAGTGATTATTGATGAAAATAT
CAAAGATGGCGAAAGACATGAAAATTCTACAACAATTATCGAAACACACA
GTCAAAATATTTTTACTAGTCAATCTAAAACCATTCAAAATGATGAACTA
TTGAAAGATGAATTTGTTACTATCATAAAAAATCCACATGAAAATAGTTC
ACAGACGACTTCCATCAATCAAATTTCATCCTCTGGTGGTTTGACTACAC
ACCAAATGGACAAGTCTACACCCAATCAATCTCTTAATTTATTTGAAAAC
AAGCATATTTTATCTCCAAACAAAGTTGAATATAGTAATAAATTAGAATC
AAGCTGTTCATCTAATCATTTAGACGAAACATTTAGTGAAGAAAATATAC
CAAAAGACAAGGTTTCTGAAACAGTGACTTCATTATTAGCTGGTGGTGAA
AATTTACAATTAAATACTTCTAATGATTATTTGCTTGAAGATGTTGTTGG
TAACGGAAGTTATAGGAGTAAAAATAATATAGTTAATGCCGATAATTCAG
AGGAAAAACTCATTAATAGAAGTGATGTTGCATCATTTGGAAGGACTCAT
ATTCGTTTGGAAGATGATCCGTGTAGAACTGATAATAATGGAATTGTGGT
TGACTACCAGGATATCCGTGACGAGCAACCAGAAAAAGTTATAGATATTC
GTTTAGGAAATCTAAGGGTAAATTTAAGTTTTTAGGTTAAATAATATTCC
AGCCTTATACATTATTATACATATATTAATATTCATGTATTTATAGGCGA
GGCATGTTTATGAAATTGTTGTGGATATTTCAAATGACCAATTAGAAGTT
GATGTTAAGGATATTACATTTAGCAAACAATGTGCACAGTTAAGTATAAA
AACTAATTTAACCTACAAAATGCATGCTCCTTGATGGTTCCGCTTTAAAC
CACTACCTTTTTAAATTATTTTCAAACTTAATTTTCTTTCCGACATAGAT
TAGCATCTATCATTCAGAAGGATGATACAAATGTATGCTGTGTTTTCTAT
TTGGAAAGCAATCATGACGAGAATCTTGAACGATGTCTAGCTATCAATGT
TAAAAACCTTCAAACAGGAGAAGTAAAAGATAATTACTCTATCATTTTTC
ATGCTAAAGTTATTGGTAATTACATGTTGATCACAATTGTGTTACAAAGT
TATTAATATGACCTTTTATTATCTTAGATCAAAAAAGATGA back to top
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