EMLSAT00000003176, EMLSAT00000003176-699023 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003176
Unique NameEMLSAT00000003176-699023
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s176supercontigLSalAtl2s176:361280..362603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003176 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003176EMLSAG00000003176-685942Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013912EMLSAE00000013912-722840Lepeophtheirus salmonisexon
EMLSAE00000013913EMLSAE00000013913-722841Lepeophtheirus salmonisexon
EMLSAE00000013914EMLSAE00000013914-722842Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776858auto776858Lepeophtheirus salmonispolypeptide
EMLSAP00000003176EMLSAP00000003176Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003176

>EMLSAP00000003176 ID=EMLSAP00000003176|Name=EMLSAP00000003176|organism=Lepeophtheirus salmonis|type=polypeptide|length=291bp
MGCQEYCSRPCLLVAAGIRWXPVAFISGILIWSYYAYVFELNFVIVSNPW
EKSVYLMFYHILLLLLVWSYLKTILSDAGKVPSSWRLTTPMNERLKAAKT
EEDWKSLLELFRVEMELPPVLQRSVQGAIRYCEKCGIIKPDRSHHCSVCG
SCIRKMDHHCPWVNNCVAFNNYKFFLLFLGYALIFCIYIAATSFHLCSFF
LSVSSLFWYHIYLVLHNRTTLEQFRAPYFRNGTQDERGWSLGSKNNLREV
FGSRPILWFLPIHTSMGDGLVYPSRISSGVCNSDCESQGSP
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mRNA from alignment at LSalAtl2s176:361280..362603+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003176-699023 ID=EMLSAT00000003176-699023|Name=EMLSAT00000003176|organism=Lepeophtheirus salmonis|type=mRNA|length=1324bp|location=Sequence derived from alignment at LSalAtl2s176:361280..362603+ (Lepeophtheirus salmonis)
ATGGGATGCCAGGAGTATTGTTCTCGGCCCTGTTTGCTCGTGGCAGCTGG
CATACGATGGRCTCCAGTGGCCTTTATATCTGGGATCCTGATTTGGAGTT
ATTATGCTTATGTTTTTGAATTGAACTTTGTGATCGTGTCGAATCCTTGG
GAGAAAAGCGTGTATCTGATGTTTTATCATATCCTCCTCCTACTGCTAGT
TTGGAGCTATTTGAAGACAATTTTGAGTGATGCAGGAAAGGTTCCCTCCT
CTTGGAGACTCACGACTCCAATGAATGAGCGCCTAAAGGCAGCCAAAACG
GAGGAAGACTGGAAGTCTTTGCTTGAGCTATTCCGCGTAGAAATGGAGCT
TCCGCCTGTTCTCCAAAGGAGTGTTCAAGGTGCCATACGCTACTGTGAAA
AATGTGGAATAATTAAACCGGATCGCAGTCATCACTGCAGTGTTTGTGGC
TCTTGCATTCGCAAAATGGATCACCACTGTCCCTGGGTTAATAACTGTGT
CGCATTCAATAACTACAAATTTTTTCTACTATTTCTGGGATATGCTCTTA
TTTTCTGTATTTATATTGCTGCAACGTCGTTCCAGTACTTTCTATTGTTT
TGGTCACAGCGTCTTAACTCCACTGGGTCTGCCAAGTTTCATGTATTTTT
CCTCCTTTTAGTCTCTGTTCTTTTTTTCTTTCCGTCTCTTCTCTCTTTTG
GTATCATATTTATCTTGTGCTTCATAATCGCACTACCCTCGAGCAATTCA
GAGCTCCTTACTTCAGAAATGGAACTCAAGATGAAAGAGGATGGAGTCTA
GGGTCAAAAAATAATTTGCGAGAAGTCTTTGGATCTCGACCCATTCTCTG
GTTTCTTCCAATACATACCTCCATGGGAGACGGCCTTGTCTATCCCTCAC
GCATAAGTAGTGGAGTTTGCAATTCGGATTGTGAATCCCAAGGTAATGAT
AAGTGCGTCGCGACTGAGGTTCTATATGAAAGGGATTCGAAAACCTCTGT
GAGGGTTGTTTCTGATCCATTTTCTTCCTCTCATTAGATGATTGTTTTTA
TATACRCCCTTCGTCTTTAAGGATCTCCATAGCTTCACAACTGCGTATCT
AATTTTGGAACTAGTAATCCTGTTTTGTCGCCATTCGTTTAAATCGTTAC
ATTGTTAGGACAACGATTAATATTAGGCCTTTGTTTATATATATATATAT
TTATATAAAACTACATAATATATCATTATTTTCTAGTGTTTTAATACAAA
AACAATATAACTTATCAAAATTGCATTTAGTCCCCATAAATTAATTATTA
TTGTTAATCCCTTATAAATAACTG
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