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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s177 | supercontig | LSalAtl2s177:251334..258827 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003203 >EMLSAP00000003203 ID=EMLSAP00000003203|Name=EMLSAP00000003203|organism=Lepeophtheirus salmonis|type=polypeptide|length=660bp
MKECSSGFCLALLLLVLPSVLCEEVIPLGTIFSKWNDHKDVYTVMQFALE
QQHNNSGRLFKFKLSADNINTVDAFKLTKIICRQFERGIYALMGSVDPES
FDTLHSFANAYEMPFVTPWFPESIHPRPVDTSADYAIQIRPEYHQGIVDV
ISYYGWNKVIYIYSDFDGLLRLQRIYRSIPKTVYGSYQFNIEMVKKISSP
KEAIDFLLEIERLDRHSIKRIVLDCSASIAKVNFFINLITGYEKSLWIIV
RNVHLGRRNFHYLMSGLVFDDEWNEKVAEYGAINVTGFRIVHREXXHARR
FLRKWKQLDRRKYPAAGVDGISSSGALAYDAVTVMEEGFRVVMREDPGIF
KYHRTYASGSSSRNKALSCDMIGDGRQTPWEHGATISRALRSLEINGITG
QIRFDSAGKRTNFSLDLMEMTSGSRLLKIGSWGDENGLRVNTIAPLTIHS
QREQVADFSKPFMSLGISIMIKKPAKQRPGVFSFMNPLSMEIWIVRESKG
KYAFLIESTYNEYTNERRPCDTMKVGKDLDAKGYGIATAKGSGLKEEVNL
AVLHLKENGDLAKLRNTWWYERTECAEKTEQSGRKNELSLSNVAGVFFIL
IGGLITAMAMALLEFCVKSRTEAKRAKTTLSDAMKNKARLALSGGRDLDS
IRFYGDSSAL back to topmRNA from alignment at LSalAtl2s177:251334..258827+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003203-699050 ID=EMLSAT00000003203-699050|Name=EMLSAT00000003203|organism=Lepeophtheirus salmonis|type=mRNA|length=7494bp|location=Sequence derived from alignment at LSalAtl2s177:251334..258827+ (Lepeophtheirus salmonis)
TTGGGGTGAGTGTAAAACCAATTTCGGCATCCCTAGTGATACATAAATGT
TTAAGCACCCATAAATTTTAAAGTTTTAAAATAATTCATTTTATGTCAAA
TAGAGATCACACTACATAAATTTAAAGAGTACAAATGTAGAGTAATAATG
GCATAGTTCGAAACTCAGAAATCCTCAGTATTTTTGAGGAATTACATACT
ATATATGTATATAGCTTATAAGTAATTGAAGGGAGAGAAAGAAGGAGGGC
CATCCAATATTGGCTTTCTTCATCATTTAGACTATACGTCACCCAAAATC
CCATCTTGTGATTTTCTAAATAAAATAAGGATTGCTCAAGTGGGACGTCA
TATGGCGATGCTTTCTAAACGCAGAAAGAGAGGACAAAATATAATATCCT
TACTTTTTTATGGGGGAGTATAAAAAGGAGAACGCTCGCCCAATATTTAT
TGATCACAACCATCTCCTGGATGGTATTCTCCTTGAATATTGGCATTGTA
CGAAAACAGTAATTAGAATTCATTGAAAAAAATTACTATGAAAAACAGAG
TAGTGCTATAATTCGAAATGAAAGAGTGTTCAAGTGGGTTTTGTTTAGCT
TTACTTCTACTCGTACTTCCATCCGTGCTCTGTGAGGAAGTCATTCCTCT
GGGTACAATTTTTAGTAAATGGAACGATCATAAAGACGTATATACAGTAA
TGCAATTCGCATTAGAGCAACAGCATAATAATAGTGGCCGACTCTTTAAA
TTCAAACTCTCCGCGGATAATATCAACACTGTAGATGCTTTCAAACTCAC
TAAAATCATTTGTCGACAGGTAATTGAAGGTTTTCAAACCTTTGTTGATT
GTAATCAACAAAAAATAGATGATTATTTCTCTCTCTCTCTCTCTCTAATA
AAGAAAACTATTGTTATAGTTGTAAATCCTATGCAAAGTTGGATTTAGGA
CTTATGTTGATTTTCTTCCTCTCATTTTTTTTTACATACCGAAAGTGTTT
ACAATTTACATTCCTAACCATTGTACCTATGTGTACTTTTCCCAAAACTT
TTAATTAATTTCTTAGATCTTGGTGACCCATAAATATGTACAATGTACCT
ATACTAGATAGTCCCATTTGAAAGGTGATCTTTTAGTATGTATTGATGAA
AAAAGATACTTTCAAAGTTTCAGCCTTCAAGAGCTCTAAAAAAAAGAAAT
ATAAATACTTTGGCATTTTTCTCCTCACAATCCTCGTAATAACGTAGAAT
GAACACCGACAACTGAATTTTATGTCAATCTGATGCACTTGTCTTATTCA
AGTTTTTTTTTAATAATTCATAAAAATCCAGTTTGATTTAAATCTTTTAT
TCGATTTGGAATTTTTAAAAATCGGTCAAAAATTTAAGGAGAAATAAATA
TTTCGTCTCTCAACACTAAAGCAATCTTGGATAAAAATTAAGAAAAGTAG
AATTTGCCAATTAATTGTTTTACTTCCTAAATATAAAAGGCCCATTATTT
AATTGACTTTATTCGCTCAATTATCGACGTCATACTATATTTTTTGGGAT
GAATTCAATTACTTAGGAATATTACCCATAGTGTGGAGTCTTCATTTGAT
ATATAAGACTTTGTTTAGTTTCGATATGGCCTTTGAAATAGAATCTATGT
GGCATTTGCAGCATCTCCAAATGATGTATCAACATAGTGCATTAATAGCA
AATATAATCAAACCCAAGATGCTAACATACTCCCGATTTACTTTCAACAA
AAATTATCCCAGGTTGATTTTTTGTTGAGGAGTTACATATATTGTATTTC
TCACTCTAGATAACTTCGTATATAGGCATTTTTTGTCTTTCAGAGGCATA
CGTATTCCATCTAAATGGAAGGAAATTGTTTTTACTCAAGTGTATAACCT
TTATTTGGTTTAAGAGTTTTTTATTTACCCCTTTATGCCCTTTCAAATAA
AATTTCTCAATTGTTCATTTTTTATTGTAACGATCAATTTTGGCTACTTT
ATGTGCATTTTGCGACACACACAAAGGGTTAATAAGAATAATTTGATAAA
GCATCGAAAAATACAAATGCAATTCAAGCTCTAATAATGGAAAAATCATT
GTTTTTCTGTTGACAACCCACATATTTAGATCTGTTGAAGGTGTTTATCA
TTAAGTTATCCTGTTGTAAACGTAGATATTTGATATAAACTGAAACTTTC
TTTATTAAGGAGAGATTAAAAGAGGATGTTACCGTAAAAATAAAGTGTAA
ACCCCTAATATTTTATTCCATAGTTTGAAAGAGGGATTTACGCTCTCATG
GGCTCTGTTGATCCAGAGTCCTTTGATACTCTCCATTCGTTTGCAAATGC
CTATGAGATGCCATTTGTCACACCTTGGTTCCCAGAATCAATTCATCCTA
GACCTGTGGATACATCTGCGGACTATGCCATTCAAATTCGACCCGAGTAT
CATCAAGGCATTGTAGATGTCATTTCATACTATGGGTGGAATAAAGTAAT
ATACATTTATAGGTAAGTCTTATTAATTATTTTAATATATTATGCGGCAG
TAGGCTTTACCCCGAGTGGGGCCTGGGGAAAGATACATAGATGGGTCCTT
TTTTTTCCCTTTTAGAAAATTCCAATCTTATTTATGAATCATATTTAAAA
AATAAAAAAAATAGTATTTTTTTAAATCACCTTCCTCTTAAGAAATATCT
TAAATGACTTCTTTTAAAAAAATAATTTGTTGGCCCTTTATTTATATATA
TATATATATTCTTTATTTATGTCCAGTTAAAAATATATATCCTTTTAGAT
CAGGAACTCATAAACCAATGTGATTTGTATTATAATAAACGTTATTCCCT
ATAACTTTTTAGTGACTTTGATGGTCTTCTTCGTCTACAGCGAATATATA
GAAGCATTCCKAAAACAGTTTATGGTTCTTATCAATTTAACATTGAGATG
GTCAAAAAGATTTCTTCACCAAAGGAAGCCATTGATTTTCTCTTAGAAAT
TGAGAGATTAGACCGTCATTCTATCAAAAGGATTGTATTGGACTGCTCTG
CCTCTATTGCTAAGGTTAATTTCTTCATTAACTTGATTACAGGTTATGAG
TGCATAGTGAGATAGGCAATAAGCACTATTTATGCTTCTTGATGAAAATA
TAAAATCATGTATTCACATCTTGGTTTCATTAAACTTGGTCAAATATGTA
TGAGAATATCTTAAGATATTCTCATACATAGTATATATAATGTTGTTGTA
TATCATTATAAATGTGTGGTACGTTAAAGCAGGCTTGAATGAATATTCCC
GAAATCGAGTGTCGATTTAAATTGTATTCTCTGACGCTTTATTATAAATT
TCTATTTAGAAATTATTTTGATCAACTCTTTGCATGTGCCAAAAATTGCA
CTTAAAGTAGCCAAAAATTTATTGTAACAATAAGAGAATGAGAAATTGAT
AGATTCTATGTATTTGAAATGGGCGTTTAAATCAAATGAACTTCTTATCC
ATAGTGAAAATTCTTGGGTATCTTAACTCATCCCACAAACTTGAATAATA
AGTTCATTATGGACTCAAATACGTCTATGAAGACTGGCTGKATATATTAT
ATATATAGTATTTTCATTTTCTTGATTTTTGTACAAGATTATTTTGTGTT
GATGCAACCACACATATACATATACCTTTGTACAATATGCACAGATATAT
ATTAATTTGATTAAGACTATAAGGAGTTTAAATTTCTTCCTTTGTATTAA
AAATCATATCAAATAGTAAAATGCAAAAAATGAATTCAATACTGTATTGT
ATATACAATGTACATAATTATCATTAAGGAATAACAATCAATTATGCTAA
TAATTTATTAATTAACAAAATAGGAAATCCTTGTGGATCATAGTGAGGAA
TGTACATTTAGGTCGACGAAATTTTCATTACCTCATGTCAGGACTTGTCT
TTGATGATGAATGGAATGAAAAGGTAGCAGAGTATGGAGCTATCAATGTA
ACTGGCTTCCGTATTGTTCATCGAGAGKCTGRTCACGCACGTCGATTCCT
TCGTAAATGGAAGCAATTAGATAGGAGGAAATATCCTGCTGCAGGAGTTG
ATGGAATTTCAAGTTCTGGGGCACTTGCATATGATGCAGTTACTGTCATG
GAAGAGGGGTTTAGAGTTGTAATGAGGGAAGATCCTGGTATTTTTAAATA
TCATCGAACTTATGCGTCTGGTTCCTCTTCACGAAATAAGGCTCTCTCTT
GTGATATGATTGGGGATGGAAGACAAACTCCGTGGGAGCATGGAGCAACA
ATTTCTAGGGCTCTAAGAAGCTTAGAAATTAATGGTATTACAGGTCAAAT
AAGGTGATTAAAACCATGAATCCCTTTGAAGATTAAAATAAATATTATTA
ATGCTACATATTTACACATGTAGATTTGACTCTGCGGGGAAAAGGACGAA
TTTTAGTTTGGACTTAATGGAAATGACCTCAGGGAGCCGACTCCTTAAGA
TCGGAAGTTGGGGTGATGAAAATGGACTTCGTGTTAATAGTAATCCAATG
CTGAATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGCTGGAGGTTATATCACAAGATCCAAAAATA
TTCAGTAAACATAATATTATTACGCCGCTATTAATTAGGTAATAACTATT
TGTATATTTTTCCAGCAATAAGACCTTCATCATGACTTCAATACTGGAGG
AGCCTTATCTAATGTGGAAGAAGCTAGAGGATGGSGAACTAGCTTTGACA
GGAAATGATCGATTTGAAGGATATTRGAAAGATCTTMCAGATCTTATTTR
GAAAACAATTAAAGCTAAATTTGAAATTAGAGTAGTGAAGGATGGAAAGT
ATGGAAGTCCAGATCCAGATTCACCGGGTAAGCTTCGAATAACATTTTAC
TTGATGATTAAATGCAAAATATATTTATAACTAGGGTTGTAAATCCTAAA
AAAAAAAATTAGCGCGCGAGTTTTGTTGTTGTTGGCAACCTAAACAGTAC
TTTTATTTTATGAAACTCTTTAGGGATGTGAAACCATCGTGAGGATACAT
TTTAGGTAAAAAGTATAAGTTGGTGGGTAACCTCCAAGATATTAGTACCT
TTATTAGTACCTATTTCAAAATTCAAACGTATTGGTGAGCAAAGGAGCAG
ACATGTCGTCTATCAAAGTTGGCAGCATATAATTTTCTTTTTGATTTACA
CTCACGAGGATTTCAACAATTTTTACATCCCTAGTTATCCTTATGATTTC
ATTCTTCAAGAGAGATCATCTAAATATAAACTATGAAGTGTGTGTTCATG
AATGACAGAGAGTAACATTGATGATGATTTGTAGGGGAGTTATAAGTGTA
AGTCCTTGTTGACCCCAGAGTAGAATTAAGCATTGAAAAGAGCGTAATTT
CTGCCTAATTCTTTGCTTGATACTCGTAGCTATTCTAACCAAATGTCATG
GCAGCTAAGCTGCTCTCCTTCAAAACATTATTAAAGTTGTCAAGATTACC
TTGTATGTTAATACGATTTATAAAACTACTTATGTGATTACTATTAACTT
ATTATTAGGTGGCTGGAATGGAATGATTGGAGAATTGATAAGAAATGAGG
CTGAAATAGCAATTGCTCCACTTACCATACACTCACAAAGGGAACAAGTT
GCGGACTTCTCCAAGCCCTTTATGTCTCTTGGAATATCCATTATGATTAA
AAAACCTGCAAAACAACGCCCAGGAGTTTTTTCTTTTATGAATCCCTTAA
GTATGGAAATTTGGATGTGTGTTGTATTTGCTTACATTGGAGTGAGCATC
GTGTTATTCCTCGTCTCTAGGTCAGTTCCATGATAAATGTTGCCGGTCCA
AACAAAAGCAAGCTAAAAGGATTTTTCTCAAAATTGAGTGTGAATGAAAT
TTTGTTTTCCTTGACAAATTATCGTCACCTTCTATCAACAAATTATTCTG
ATTAACCCTTTGGGTGTGCCGCAATTTGCTTTTAAATAAGTCAAAATTGA
TCGCCACAATATAAAAAAATGAGAAATTGACATATTTTATTCGAAAGGAC
AAAACGGGGTTCATATAAATCTCTTAAATGAAATAAAGGTTTTAAACTAT
TGCTTATACTCTCTGGCGTTGAATACAGAGCCTATAATTGAATTAAATAT
GTCTATAACACATTTGCTTGTATATAGGGAGTAAAAAATAAATTCTCTTT
TTCTTGATTTTTTTTTTTTTTTTGAGATTGTTTTWTGTTGACGCATCAAA
AATTGATAACTTTAAAGATAGAAACGATTATAAAATGAGTATACAATTTG
TATTCCAGATTTTCACCCTATGAATGGAAAATAGATGAGAGTATTGCTGG
TACAACAGTCAGTAATCATTTTTCCATCACTAATTCCTTATGGTTTGCAC
TTGGAGCCTTCATGCAACAAGGTACTGATGTGACTCCAAGATCTGTTTCA
GGGAGAATAGTTGGAGGGGCCTGGTGGTTCTTTTCCCTTATTGTCWTTTC
TTCCTKCKCTGCCAATTTGGCGGCCTTCCTTACCGTCGAAAGAATGGTCA
CGCCTATCGATTCCGCAGATGACTTGGCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAACGAATATA
TTAATCTCAAACTCCATATCCTCATTTCCGAATCCTTTTCAGAGTGAGGG
AATCCAAAGGGAAGTATGCTTTTCTTATCGAGTCTACTTATAATGAATAT
ACAAATGAGCGAAGGCCTTGTGATACAATGAAGGTAGGTAAGGATTTGGA
CGCTAAGGGCTATGGAATTGCAACAGCAAAGGGATCTGGTCTTAAGGAGG
AAGTCAATTTAGCTGTTTTACATTTGAAAGAAAATGGGGATTTGGCGAAA
CTTAGGAATACGTGGTGGTATGAGAGAACGGAATGTGCTGAAAAGACAGA
GCAGTCGGGGCGGAAAAACGAATTGTCTTTGAGTAATGTGGCGGGTGTAT
TCTTTATTTTGATTGGAGGACTGATTACAGCAATGGCAATGGCATTACTG
GAATTTTGTGTAAAATCTAGGACTGAAGCTAAAAGGGCAAAAACAACACT
TTCTGATGCTATGAAAAATAAGGCTCGTTTAGCACTCTCTGGAGGMAGAG
ACTTGGATTCTATTCGATTCTATGGGGACTCTTCAGCACTTTAA back to top
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