EMLSAT00000003220, EMLSAT00000003220-699067 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000003220
Unique Name	EMLSAT00000003220-699067
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s177	supercontig	LSalAtl2s177:494079..496669 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000003220 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000003220	EMLSAG00000003220-685986	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000014097	EMLSAE00000014097-723025	Lepeophtheirus salmonis	exon
EMLSAE00000014098	EMLSAE00000014098-723026	Lepeophtheirus salmonis	exon
EMLSAE00000014099	EMLSAE00000014099-723027	Lepeophtheirus salmonis	exon
EMLSAE00000014100	EMLSAE00000014100-723028	Lepeophtheirus salmonis	exon
EMLSAE00000014101	EMLSAE00000014101-723029	Lepeophtheirus salmonis	exon
EMLSAE00000014102	EMLSAE00000014102-723030	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778157	auto778157	Lepeophtheirus salmonis	polypeptide
EMLSAP00000003220	EMLSAP00000003220	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s177:494079..496669-

protein sequence of EMLSAP00000003220

>EMLSAP00000003220 ID=EMLSAP00000003220|Name=EMLSAP00000003220|organism=Lepeophtheirus salmonis|type=polypeptide|length=671bp
MELEGVVQNYAWGKIGSSSAVADLSTVKVDPDLTYAELWMGTHPNGPATL
KGTGISLKDFIDGSENKAKVLGEECNKQFGGSLPFLLKVLSVNKALSIQA
HPNKELAETLHEQRPDIYKDPNHKPEMALALTEFEGLCGFRPLGEIAKFL
LNMDPLRNVVGESNAVAIVNGNADALKDAFGALMQCEPETIKSQLSSMLN
SNYEIPYLKELFLRLHKEYPGDVGCFVIYFLNFVVLQPGESMFLGPNLPH
AYLKGDCIECMAXSDNVVRAGLTPKLIDVPTLLSMLDYQSVSNVKFSPVQ
ENEQSLLYSPPVKDFSIVKICVLPGKKYTLLPRKSASILIYTTGTDVKGK
IIFLKAEEIFEIQENQTDVLVFQAFCEVMKRLEKRATAAEQLIEIIKRHI
NEVRTSESSYGYEIHRLKTENNTLRDEIELWKRRLITSEKSKGIRQFSGF
TTLMKPSTTGVSSEPITNNPKVSSDSEDKSSSTVTQKQPSVKKETKNKGG
EPKKSDEPTVDVGRLDIRVGHIISAKKHADADSLYVESIDVGEEKPRTVI
SGLVKFIPEAEMQDRMVVVLCNLKPSKMRGIMSEAMVMCASTPDKVELLC
PPEGTKPGDLVHVEGYERNPDTQLNPKKKIFELCAPDLKTNSEGFACYKN
IPWVVNGKNVTSQTLKNVQVK

mRNA from alignment at LSalAtl2s177:494079..496669-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000003220-699067 ID=EMLSAT00000003220-699067|Name=EMLSAT00000003220|organism=Lepeophtheirus salmonis|type=mRNA|length=2591bp|location=Sequence derived from alignment at LSalAtl2s177:494079..496669- (Lepeophtheirus salmonis)
ATGGAGCTTGAAGGAGTAGTTCAAAACTATGCTTGGGGAAAGATAGGCTC
STCAAGTGCTGTTGCAGATTTGTCCACAGTAAAAGTTGATCCAGATCTTA
CCTATGCGGAGCTCTGGATGGGAACTCATCCTAATGGGCCTGCAACTCTT
AAAGGAACTGGGATATCACTCAAGGTTCAACTCAACATTACTTTTATTTA
ATTACAAATGAAATATTTAATTCGTTTTTAGGACTTTATTGATGGGTCAG
AGAATAAAGCAAAGGTTCTGGGAGAAGAATGTAATAAGCAGTTTGGAGGA
TCACTCCCTTTTCTTCTCAAAGTTCTTTCCGTTAATAAAGCCCTGTCAAT
ACAAGCTCATCCCAACAAAGAATTGGCAGAAACTCTACATGAACAAAGGC
CAGATATCTATAAAGATCCTAATCATAAACCTGAAATGGCTCTTGCTTTA
ACTGAATTTGAAGGTCTATGCGGTTTTCGACCTTTGGGAGAAATTGCAAA
ATTCTTATTAAACATGGATCCTTTAAGAAATGTGGTGGGCGAAAGCAATG
CTGTTGCCATTGTGAATGGTAATGCTGATGCTTTAAAAGATGCCTTTGGG
TGAGCTAAGAAATATACATGTCTATTTATCAAAAGTACTTTCATGTACAT
ATTTCCCCCTTCATTATTTTAGGGCATTAATGCAATGTGAACCCGAAACA
ATCAAATCACAATTATCTTCAATGCTTAATTCTAATTATGAAATACCTTA
TTTAAAGGAACTTTTTCTCCGACTTCATAAAGAATATCCGGGAGATGTCG
GATGCTTTGTTATATACTTCTTAAATTTTGTTGTTCTCCAACCAGGGGAA
TCCATGTTTTTGGGTCCCAACTTACCTCACGCGTATCTGAAAGGAGATTG
TATTGAATGTATGGCTTKCTCTGATAATGTTGTTCGTGCTGGTTTGACTC
CCAAGTTAATAGATGTGCCAACATTATTGAGTATGTTGGACTACCAATCC
GTTTCAAATGTAAAATTTAGTCCTGTTCAAGAAAACGAACAGAGCTTATT
GTACAGTCCTCCTGTGAAGGACTTTTCTATTGTAAAAATATGTGTTTTGC
CCGGAAAAAAGTATACACTTCTTCCCAGAAAAAGCGCCAGTATTCTTATT
TATACAACTGGAACTGATGTGAAAGGAAAAATTATATTTTTGAAGGCTGA
AGAGATCTTTGAAATACAAGAGAATCAAACTGATGTCCTTGTGTTTCAAG
CTTTTTGTGGTTGTTGATAGCTTAAATATTGTGTACCTTTGTGAATTTAT
TTACCCATATTCTTCTACAGTACCAAAAAAAATTGTTATAGAAAAAATAG
TAATCTGAATAAATCAATGCGGCTATTCACATTGAACTATTAATATTTTA
TATTGTATGAACTATCTAAATACATGAATTAGTGTTAATATTCATTGGCG
CATACTATACCATAGGTTTGCTTTCTTATGCGTGCGGTGAAAAAGATTTC
AATTTTATTCATACTGACAAAAACTTCTTAATTCCTGTTTCAGTTATCAA
TTATCATATAAATGTTTAAAATGGCAACCATAGAGGTGATGAAGCGTTTG
GAGAAGAGAGCTACTGCAGCTGAGCAATTGATTGAAATCATCAAACGGCA
TATAAATGAAGTCAGGACTTCGGAGTCATCGTACGGTTACGAGATCCATC
GTTTAAAAACGGAGAATAATACTCTCAGAGATGAAATCGAGCTATGGAAA
AGAAGACTCATCACTTCTGAAAAGTCAAAGGGTATACGACAATTTTCCGG
TTTCACAACTCTCAGTAAGTGTTTTCGTCATTCTCTTCACATTTAATTTG
TATCACATTATGATATTTTTACGAATATAGTGAAACCTTCAACTACCGGC
GTTTCTTCAGAACCAATCACGAATAATCCAAAGGTATCATCTGATTCAGA
AGATAAATCATCATCAACTGTTACACAGAAGCAACCTAGTGTAAAAAAGG
AGACGAAAAACAAAGGAGGTGAACCGAAAAAGTCTGATGAACCTACAGTG
GATGTTGGACGATTAGATATACGTGTTGGACATATTATTTCTGCTAAAAA
ACATGCTGATGCCGATAGTCTTTATGTTGAAAGCATAGATGTGGGAGAAG
AAAAGCCTCGGACTGTTATTTCGGGACTTGTGAAGTTTATACCTGAGGCT
GAAATGCAAGATCGAATGGTTGTTGTACTTTGTAACTTGAAACCCTCCAA
AATGAGAGGGATTATGTCTGAAGCCATGGTTATGTGCGCTTCAACTCCTG
ATAAAGTAACTTGAATTACTATTTTAAGTTTGGTGATATATTAATTAATC
AATATTTTAGGTCGAATTATTATGTCCACCCGAGGGCACCAAACCTGGAG
ATTTGGTACACGTAGAAGGCTATGAAAGAAACCCTGATACTCAACTTAAC
CCTAAAAAGAAGATTTTTGAGTTGTGTGCTCCTGATCTCAAAACCAATTC
TGAGGGTTTTGCTTGCTACAAAAATATTCCTTGGGTTGTTAATGGAAAGA
ACGTTACTTCTCAAACGTTGAAAAATGTTCAAGTCAAATAA

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